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Bash the bug
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Help us tackle antimicrobial resistance (AMR) through public outreach🦠

Brought to you by the ‪Modernising Medical Microbiology team from @ox.ac.uk‬

Visit our blog 🔍 bashthebug.net
Tiny microbes, big questions and plenty of curious minds at New Scientist Live!

We had a brilliant time this weekend bringing our research to life🔬

Curious about what we got up to?
Check out our blog post to see Droplet Detectives and Sinks Under Siege activities🦠 ➡️ bashthebug.net/2026/10/13/d...
October 15, 2026 at 4:44 PM
Droplet detectives and sinks under siege: MMM at #NewScientistLive

We spoke to over 500 people about how bacteria can spread from hospital sinks and how we might prevent it, with hands-on activities from our @BashTheBug team!

Thanks to Medical Research UK for funding our stand!

#Microbiology
Droplet detectives and sinks under siege: MMM at New Scientist Live!
How can bacteria spread from hospital sinks, and what can we do to stop them? We recently took our research to New Scientist Live, where researchers from Modernising Medical Microbiology (MMM) ran two interactive activities exploring bacterial transmission in hospital sinks. Over the course of the event, we spoke to more than 500 people, with children and families particularly keen to get involved!
bashthebug.net
October 13, 2026 at 4:12 PM
Beyond the basin: my research internship at Oxford

Hospital sinks are essential for handwashing, but beneath the basin lies a complex microbial environment that may present challenges for infection prevention...

Read more on our blog!

#AMR #InfectionPrevention
Beyond the basin: my research internship at Oxford
Hospital sinks are essential for handwashing, but beneath the basin lies a complex microbial environment that may present challenges for infection prevention. During my internship at the University of Oxford, I had the opportunity to contribute to research investigating the microorganisms found in hospital sinks and their potential relevance to patient safety. I worked under the supervision of Dr Aoife Kearney on the SELECTION project, building on Professor Nicole Stoesser and her colleagues’ research into hospital sink environments and healthcare-associated infections.
bashthebug.net
September 23, 2026 at 4:04 PM
Microbiology is coming out of the lab!

Infusoria, a new exhibition by MMM Artist-in-Residence Anna Dumitriu, runs in the JR Hospital from 26 Sept–6 Nov 2026.

New works inspired by Oxford research explore hospital sinks, wastewater, water microbiomes and antimicrobial resistance.
When microbiology becomes art: Infusoria
Infusoria 26 September – 6 November 2026Artlink Corridor Gallery, John Radcliffe Hospital, Oxford From hospital sinks to BioArt: our microbiology research inspires new exhibition Infusoria What does the microbial world of a hospital sink look like when viewed not only through the lens of microbiology, but through art? Research from Modernising Medical Microbiology (MMM) at the University of Oxford…
bashthebug.net
September 3, 2026 at 2:33 PM
A closer look at microplastics!

Recently, we visited UK Centre for Ecology & Hydrology (UKCEH) to explore the analysis of microplastics in sink trap aspirates collected from hospital environments.
A closer look at microplastics! 
Recently, we visited UK Centre for Ecology & Hydrology (UKCEH) to explore the analysis of microplastics in sink trap aspirates collected from hospital environments. It was a great opportunity to see the analytical process up close, exchange expertise and preliminary results, and take the next steps towards understanding which microplastics are present in these samples and their potential role in harbouring antimicrobial-resistant (AMR) bacteria.
bashthebug.net
August 27, 2026 at 1:21 PM
Reposted by Bash the bug
A closer look at microplastics!

Recently, we visited @ukceh.bsky.social to explore the analysis of #microplastics in sink trap aspirates collected from hospital environments.

@afswinkels.bsky.social
August 26, 2026 at 2:47 PM
Work experience: an exciting week at MMM!

Over the last week I have had the pleasure of doing work experience here at MMM Labs, this has provided me with an incredible opportunity and skills that will benefit me greatly in the future such as pipetting and plating techniques. Over the course of the…
Work experience: an exciting week at MMM!
Over the last week I have had the pleasure of doing work experience here at MMM Labs, this has provided me with an incredible opportunity and skills that will benefit me greatly in the future such as pipetting and plating techniques. Over the course of the week, I have had the chance to talk to multiple members of the team and have had 1 on 1 conversations about their careers and certain topics such as bioinformatics, phylogenetic trees, environmental sampling from sinks and many more.
bashthebug.net
July 17, 2026 at 3:59 PM
Reposted by Bash the bug
I named all the coffee machines in @modmedmicro.bsky.social
July 16, 2026 at 2:46 PM
Work experience: lab opportunities and career pathway chats!

Over the last three days we had the pleasure of being introduced to the MMM team and the work they do...
Work experience: lab opportunities and career pathway chats!
Over the last three days we had the pleasure of being introduced to the MMM team and the work they do. After understanding a bit more about lab safety, the pathways that lead to a role in microbiology, as well as how the lab performs sustainable practices, we were able to do our own hands-on experiments. We had the opportunity to amplify bacterial DNA using PCR to determine whether it carried a resistant gene to antibiotics.
bashthebug.net
July 1, 2026 at 3:45 PM
Reposted by Bash the bug
Sometimes, food can look good & still make you sick.

You can reduce your risk of illness incl. by:
✅ Cooking meat all the way through
✅ Washing fruit & vegetable with safe water
✅ Keeping food at safe temp.

🆕 WHO estimates of the global burden of foodborne diseases 2026 ed. https://bit.ly/4dQyKQI
June 4, 2026 at 1:16 PM
NIHR webinar on BashTheBug on YouTube

BashTheBug was originally a large international citizen science project that invited anyone to help us classify how well different samples of M. tuberculosis grew in the presence of a range of antibiotics. It ran from 2017 to 2021 and in that time 46,427…
NIHR webinar on BashTheBug on YouTube
BashTheBug was originally a large international citizen science project that invited anyone to help us classify how well different samples of M. tuberculosis grew in the presence of a range of antibiotics. It ran from 2017 to 2021 and in that time 46,427 people took part and collectively they classified 4,746,420 images of M. tuberculosis growing on different concentrations of one of 13 antibiotics. 
bashthebug.net
June 1, 2026 at 12:14 PM
We had an amazing time in Westgate, Oxford today!

We had many attempts to 'bash the bug' and get the high score for the day on our dance mat 💃🕺 where overusing antibiotics causes resistance so you have to be careful what you're prescribing!💊

#AMR #ScienceOutreach #Microbiology #Oxford
May 28, 2026 at 5:44 PM
Come and try our strawberry DNA extraction! 🍓Find out how this technique can be used by scientists to diagnose infections and choose which antibiotics to prescribe 💊

@oxfordbrc.bsky.social @ox.ac.uk #AMR #Oxford
May 28, 2026 at 12:20 PM
We're ready at the @oxfordbrc.bsky.social! Come over and extract strawberry DNA, fight super bugs on the dance mat, or solve the mystery of the hospital outbreak!

#AMR #PublicOutreach #Science
May 28, 2026 at 9:33 AM
Come see us at the @oxfordbrc.bsky.social showcase! We'll be in Westgate, Oxford 10-3.30.

We'll be bringing the dance mat so come and try to beat the germs with antibiotics and claim the high score💃🕺

#AMR #PublicOutreach @ox.ac.uk
May 27, 2026 at 4:41 PM
Reposted by Bash the bug
Did you know that the NHS offers free latent TB infection testing and treatment to people at greatest risk of TB? As at you GP surgery or find out more at www.thetruthabouttb.org. Prevention is better than cure. #worldtbday2026 #worldtbday
March 24, 2026 at 6:03 PM
Reposted by Bash the bug
Using graph neural networks and protein structural data, we’ve also shown how deep learning can improve prediction of pyrazinamide resistance — highlighting the potential of structure-aware models to tackle complex antimicrobial resistance challenges.
link.springer.com/article/10.1...
Predicting pyrazinamide resistance in Mycobacterium tuberculosis using a graph convolutional network - BMC Microbiology
BMC Microbiology - Pyrazinamide is an important first-line antibiotic for treating tuberculosis, with resistance primarily driven by mutations in the pncA gene. Traditional machine learning models...
link.springer.com
March 24, 2026 at 3:55 PM
Reposted by Bash the bug
We’ve explored compensatory mutations that can restore bacterial fitness in resistant strains, helping explain how resistant TB continues to spread — and reinforcing the urgency of better diagnostics and stewardship.
www.microbiologyresearch.org/content/jour...
Compensatory mutations are associated with increased in vitro growth in resistant clinical samples of Mycobacterium tuberculosis
Mutations in Mycobacterium tuberculosis associated with resistance to antibiotics often come with a fitness cost for the bacteria. Resistance to the first-line drug rifampicin leads to lower competiti...
www.microbiologyresearch.org
March 24, 2026 at 3:55 PM
Reposted by Bash the bug
Our work on bedaquiline resistance (catomatic) provides a reproducible way to construct catalogues of resistance-associated variants — critical for protecting one of the key drugs used to treat MDR-TB.
www.microbiologyresearch.org/content/jour...
An improved catalogue for whole-genome sequencing prediction of bedaquiline resistance in Mycobacterium tuberculosis using a reproducible algorithmic approach
Bedaquiline (BDQ) has only been approved for use for just over a decade and is a key drug for treating multidrug-resistant tuberculosis; however, rising levels of resistance threaten to reduce its eff...
www.microbiologyresearch.org
March 24, 2026 at 3:55 PM
Reposted by Bash the bug
We’ve developed tools like gnomonicus, which translate genomic data into actionable resistance predictions using the WHO catalogue, achieving >95% sensitivity and specificity for two key first-line drugs.
www.microbiologyresearch.org/content/jour...
Characterizing the performance of an antibiotic resistance prediction tool, gnomonicus, using a diverse test set of 2,663 Mycobacterium tuberculosis samples
Tuberculosis remains a global health problem. Making it easier and quicker to identify which antibiotics an infection is likely to be susceptible to will be a key part of the solution. Whilst whole-ge...
www.microbiologyresearch.org
March 24, 2026 at 3:55 PM
Reposted by Bash the bug
Our recent preprint shows that Oxford Nanopore sequencing, combined with improved DNA extraction and amplification, can deliver rapid and reliable genomic characterisation directly from clinical cultures — helping move toward real-time TB diagnostics.
Read more: www.biorxiv.org/content/10.6...
www.biorxiv.org
March 24, 2026 at 3:55 PM
Reposted by Bash the bug
On #WorldTBDay, it’s important to reflect on the scale of the challenge we’re facing.
In 2024 alone, tuberculosis (TB) caused 1.23 million deaths worldwide, remaining the leading cause of death from a single infectious agent, according to WHO

@ndm.ox.ac.uk
March 24, 2026 at 3:55 PM
Reposted by Bash the bug
Since 2017 the CRyPTIC project collected and collated 53,897 clinical TB samples with genetics and drug susceptibility testing data.

You can download the datasets via crypticproject.info and v4.0.0 will appear later this year.

#WorldTBDay @modmedmicro.bsky.social
The CRyPTIC project
crypticproject.info
March 24, 2026 at 10:19 AM