Eirik Lågeide
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eiriklag.bsky.social
Eirik Lågeide
@eiriklag.bsky.social
Doctoral researcher at MPI Tübingen 🇩🇪🇳🇴 - Plant biology, immunity, virology, evolution 🌱🧬 Plant immunogenomics group
Pinned
Very excited to share the first preprint from my PhD with the community! This is also the first paper from the Plant Immunogenomics group with @galofir.bsky.social, so stay tuned for more!
www.biorxiv.org/content/10.6...
1/n 🧵
NO VEIN is an ancestral immunity protein involved in plant-virus interaction
The conservation of immune systems from prokaryotes to eukaryotes can guide discovery of immunity genes across the tree of life. Most studies to date have focused on metazoan systems, while the extent...
www.biorxiv.org
Reposted by Eirik Lågeide
Our lab's first preprint! The antiphage protein Tiamat is an ATPase and DNase with homologs across the tree of life. What started as undergrad Shirley Yuan's summer project grew into a paper and a collaboration with
@jpkbravo.bsky.social's group. Link: www.biorxiv.org/content/10.6...
October 1, 2026 at 10:04 PM
Very excited to share the first preprint from my PhD with the community! This is also the first paper from the Plant Immunogenomics group with @galofir.bsky.social, so stay tuned for more!
www.biorxiv.org/content/10.6...
1/n 🧵
NO VEIN is an ancestral immunity protein involved in plant-virus interaction
The conservation of immune systems from prokaryotes to eukaryotes can guide discovery of immunity genes across the tree of life. Most studies to date have focused on metazoan systems, while the extent...
www.biorxiv.org
October 1, 2026 at 1:40 PM
Reposted by Eirik Lågeide
Now out! Together with Kenneth Berendzen, Yu Zhou et al., in a commendable team effort, set up a FANS-FAPS protocol for the isolation of plant Cajal bodies @zmbp-tuebingen.bsky.social — revealing kingdom-specific protein composition: academic.oup.com/nar/article/...
Proteome profiling of plant Cajal bodies uncovers kingdom-specific components
Abstract. Membraneless organelles (MLOs) in eukaryotic cells, such as the nuclear Cajal body (CB), have been notoriously difficult to biochemically isolate
academic.oup.com
September 18, 2026 at 4:14 PM
Reposted by Eirik Lågeide
Super happy to finally share our preprint with the community! 🎉

Fungal extracellular vesicles deliver RNA cargo into host cells - but how do they get through the plant cell wall?

This question puzzled us and the field for years… 🧵 1/6
August 10, 2026 at 10:36 AM
Reposted by Eirik Lågeide
Had lots of fun presenting my work at #SoapboxSciene Tübingen yesterday. I talked about natural diversity, plant immune genes and how I use the former to find the latter. Explaining my research to the public was definitely an exciting challenge. Huge thanks to the organizers and all the helpers! 💜
July 12, 2026 at 1:49 PM
Reposted by Eirik Lågeide
New paper from the Yasin Dagdas (@plantophagy.bsky.social) group, this time in @science.org, on how plant cells cope with viral infection and how selective autophagy delays cell death to give plants a chance to survive. Chapeau and congratulations to all the authors!
www.science.org/doi/10.1126/...
Selective autophagy fine-tunes plant immunity to promote cell survival during viral infection
RNA viruses co-opt host endomembranes to form replication complexes, often triggering cellular stress and immune responses. Here, we show that Arabidopsis thaliana activates selective autophagy to res...
www.science.org
May 29, 2026 at 11:26 AM
Reposted by Eirik Lågeide
Day 1 of the Mendel Early Career Symposium! 100 international researchers gathered for networking, engaging talks & posters, keynote by @emmanuellebayer.bsky.social, & workshop on ChimeraX/AlphaFold. Thanks to the sponsors for supporting expanding horizons in #PlantBiology. #Mendel_ECR_26
May 21, 2026 at 3:32 PM
Reposted by Eirik Lågeide
I am thrilled to share our last work on the evolution of plant antiviral immunity @cragenomica.bsky.social
!. Please, let us know what you think!
biorxiv.org/content/10.648
98/2026.05.18.725958v1
🧵
biorxiv.org
May 19, 2026 at 11:48 AM
Amazing protein name, good job!
May 16, 2026 at 8:28 AM
Reposted by Eirik Lågeide
Born from the collaborative spirit of #TRR356, I’m excited to share my first first-author project! 🪴🦠
What started as a side project with @kbuhrman.bsky.social led us to discover that KAR/KL and SL signalling fine-tune the strength and timing of plant defense responses in a conserved manner!
Karrikin and strigolactone signalling affect pattern-triggered immunity and resistance to specific pathogens https://www.biorxiv.org/content/10.64898/2026.05.05.722863v1
May 7, 2026 at 1:57 PM
Reposted by Eirik Lågeide
Fantastic paper led by Matthew Davis from
@grey-monroe.bsky.social, on genome degradation in long-term walnut tissue culture: Somatic embryogenesis increases mutation rates >30x, with aneuploidy, large deletions, somatic recombination, and elevated #TE activity.

www.pnas.org/doi/10.1073/...
April 28, 2026 at 5:42 PM
Reposted by Eirik Lågeide
🎉Excited to share our new preprint!

TIR domains from diverse animals, including human TLR4, are catalytically active and produce cyclic ADP-ribose (cADPR). This enzymatic activity is widespread in animals and conserved across the tree of life.

www.biorxiv.org/content/10.6...
www.biorxiv.org
April 23, 2026 at 6:01 AM
Reposted by Eirik Lågeide
Dynamic co-existence of bacteriophages and their hosts in the Arabidopsis thaliana phyllosphere https://www.biorxiv.org/content/10.64898/2026.04.14.718382v1
April 16, 2026 at 3:17 AM
Reposted by Eirik Lågeide
Behind the scenes!
go.nature.com/4bYY8BM
What brown algae taught me about the importance of jumping genes for genome evolution
go.nature.com
April 3, 2026 at 11:49 AM
Reposted by Eirik Lågeide
How diverse is bacterial immunity ?

We report in @science.org how language models allowed us to predict 2.4M antiphage proteins spanning >23K novel potential systems.
👏 @emordret.bsky.social, @alexhv.bsky.social & al doi.org/10.1126/scie...

Explore them here defensefinder.mdmlab.fr/wiki/refseq_...
www.science.org
April 2, 2026 at 6:44 PM
Reposted by Eirik Lågeide
We have been cooking up this story for a while and we are excited to finally be able to share!

Read on if you're interested in whole plant regeneration WITHOUT the application of hormones!
March 31, 2026 at 4:15 PM
Reposted by Eirik Lågeide
How much protein diversity can Life on Earth actually generate?

With DIAMOND DeepClust, we show how billions of proteins across the tree of life can be clustered at low-identity for downstream analytics tasks.

📚Paper: www.nature.com/articles/s41...
💻Code: github.com/bbuchfink/di...
March 24, 2026 at 4:58 PM
I love it when you're reading serious papers and then come across some humanity sprinkled in-between all the seriousness
March 18, 2026 at 9:16 PM
Reposted by Eirik Lågeide
1/11 🔥 New preprint alert 🔥
We wanted to know what plants in the wild really care about. So we asked them 🎤.
Here is what we learned: “Biotic-response networks are an important organizer of the transcriptome in wild Arabidopsis thaliana populations”
www.biorxiv.org/content/10.6...
March 14, 2026 at 9:41 AM
Reposted by Eirik Lågeide
One of those stories you can't help getting excited about every time you hear it presented. Great work from everyone involved ! #PlantScience
New Preprint: Plasma membrane nanoscale dynamics of Arabidopsis leucine-rich repeat receptor kinase complexes (2026)

https://www.tsl.ac.uk/publications/164874
bioRxiv: Plasma membrane nanoscale dynamics of Arabidopsis leucine-rich repeat receptor kinase complexes (2026)
Plasma membrane-localized receptors operate as dynamic signaling complexes and integrative networks, yet the spatial and temporal regulation of these interactions remain largely unknown. Here, by analyzing the components of a minimal Arabidopsis leucine-rich repeat receptor kinase network, we describe the differential diffusion and organization of receptor complex components and unveil the nanoscale spatial and temporal logic underlying the formation of receptor kinase complexes. The ligand-binding receptors FLS2 and BRI1, and the accessory receptor BIR3, are organized in plasma membrane nanodomains, within which the co-receptor BAK1 diffuses and is spatially arrested upon ligand perception. BAK1 spatial arrest relies on extracellular domain (ECD)-ECD interactions but does not require receptor complex activation. Mathematical modelling, single molecule imaging and bio-assays infer that accessory receptors maintain a dynamic pool of co-receptors in the vicinity of ligand-binding receptors to promote ligand-induced complex formation and signaling. We propose that ligand-induced receptor kinase complex formation is a deterministic process defined by the relative nanoscale spatial positioning of individual signaling and regulatory components.
doi.org
March 10, 2026 at 1:07 PM
Reposted by Eirik Lågeide
This account of the eLife saga will provoke much debate. One aspect isn't accurate: eLife wasn't "designed as an experiment in removing gatekeepers". The original intent was to publish "outstanding papers" but have the gatekeepers be academic not professional editors 1/2 nikomc.com/2026/03/05/e...
eLife Fallout
When a prestigious journal scrapped accept-reject decisions on submitted papers, some scientists rebelled, and the editor-in-chief was fired.
nikomc.com
March 10, 2026 at 6:59 PM
Reposted by Eirik Lågeide
The function of nuclear speckles is revealed! This is an incredibly important paper with absolutely beautiful data! Wow! www.cell.com/cell/fulltex...
Nuclear speckles enable processing of RNA from GC-rich isochores
Nuclear speckles are key subnuclear structures that regulate gene expression in GC-rich regions. This work shows that the evolution and expansion of core speckle proteins were crucial for the increase...
www.cell.com
February 25, 2026 at 5:43 PM
Reposted by Eirik Lågeide
Please share! We are looking for a postdoctoral scientist (2 years, extension possible) starting from 01/05/2026 at
@ipbhalle.bsky.social! The project focuses on plant immune receptor biochemistry and structural biology.
Deadline 09/03/2026.

Apply at: ipb-halle.mhm.jobs/11-postdocto...
Postdoctoral position in biology (m/f/d) (2/2026)
Leibniz Institute of Plant Biochemistry (Halle) offers a Postdoctoral position in Biology
ipb-halle.mhm.jobs
February 5, 2026 at 9:06 AM
Reposted by Eirik Lågeide
You can find the original article in Science Advances: www.science.org/doi/10.1126/...
4/4
#PlantScience
Arboviruses manipulate rice’s volatile emissions, protecting insect vectors from natural enemies in the field
Rice viruses modify plant volatiles to protect insect vectors from natural enemies.
www.science.org
January 9, 2026 at 2:44 PM
Reposted by Eirik Lågeide
🧵 Just out in Cell after more than 10 years in the making!

🎓 www.cell.com/cell/fulltex...

Plants and animals evolve radically different body plans.

Do they also operate under fundamentally different molecular evolutionary constraints during organ formation?

@cellpress.bsky.social
January 7, 2026 at 11:50 AM