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Emerald Perlas 🇵🇭🇺🇸🇮🇹
@emeraldaperlas.bsky.social
Visual Chronicler of gene expression through Histology at EMBL Rome. Reproductive Biology and plant enthusiast. UC Davis alum. Views my own.
Reposted by Emerald Perlas 🇵🇭🇺🇸🇮🇹
📄 Our latest review is now out in Current Opinion in Chemical Biology!

We discuss a growing class of oligonucleotide-directed proximity labeling strategies that use programmable DNA hybridization to target RNAs and genomic loci.

This was a fun one to write—I hope you enjoy it!

bit.ly/4h6KaRV
bit.ly
September 2, 2026 at 6:53 PM
Histological aging signatures for monitoring tissue-specific aging and disease

rdcu.be/fAjPn
rdcu.be
August 17, 2026 at 6:27 AM
Testing some possible antibody markers to use on some paraffin embedded samples. Here's one that looks really cool on the olfactory epithelium.

#FluorescenceFriday

Olfactory sensory neurons sending their dendrites towards the nasal cavity.
August 14, 2026 at 12:18 PM
Reposted by Emerald Perlas 🇵🇭🇺🇸🇮🇹
Do you study maternal-fetal interactions? Then we have just the event for you: join the new EMBO | EMBL Symposium 'The maternal-fetal dialogue: from mechanisms to pregnancy outcomes'!

Submit your abstract for #EESMaternalFetalLink by 12 January: s.embl.org/ees27-01-bl
August 12, 2026 at 1:46 PM
Reposted by Emerald Perlas 🇵🇭🇺🇸🇮🇹
Here, Helena J. Teede et al. discuss the pathophysiology of polyendocrine metabolic ovarian syndrome (formerly known as polycystic ovary syndrome) and its effects on pregnancy (£) rdcu.be/fzgWC #MedSky #EndoSky
August 11, 2026 at 2:29 PM
Multimodal imaging of gene expression, morphology, and activity of the same neuron

www.sciencedirect.com/science/arti...
Multimodal imaging of gene expression, morphology, and activity of the same neuron
Elucidating the relationships among in vivo activity, brain-wide projection, and gene expression is critical for understanding neuronal functions, but…
www.sciencedirect.com
August 5, 2026 at 12:54 PM
We are EMBL: Emerald Perlas on infrastructures and technology in research www.embl.org/news/lab-mat...
We are EMBL: Emerald Perlas on infrastructures and technology in research | EMBL
Emerald Perlas, Head of the Histology Facility, talks about his experience in supporting multidisciplinary research at EMBL Rome and keeping up with technological advances
www.embl.org
July 31, 2026 at 6:17 PM
Reposted by Emerald Perlas 🇵🇭🇺🇸🇮🇹
Get your calendars, because the new 2027 EMBL Annual Poster has arrived: s.embl.org/2027-poster

Whether you'd like to enhance your skills in a practical course or engage with the latest research at one of our conferences, we've got you covered. See you at EMBL in 2027! 🙌

#LifeSciences #EMBL
July 31, 2026 at 7:37 AM
For this week's #FluorescenceFriday

Highlighting some important structures in the regulation of ovarian function
#ReproductiveBiology
July 17, 2026 at 2:28 PM
The oocyte-enriched metabolite serotonin alleviates cellular senescence and aging phenotypes in the mouse.

EMBO J 45, 4849–4886 (2026)
doi.org/10.1038/s443...
The oocyte-enriched metabolite serotonin alleviates cellular senescence and aging phenotypes in the mouse - The EMBO Journal
Whether metabolites enriched at early developmental stages affect cellular and organismal aging remains unclear. In this study, we comprehensively profiled the metabolic landscape of mouse oocytes in comparison to cleavage-stage embryos. Our analysis revealed that oocytes display accumulation of reductive metabolites that diminish following fertilization. Notably, we identified serotonin (5-hydroxytryptamine, 5-HT) as an oocyte-enriched metabolite with protective roles in aging. The underlying mechanisms operate through dual pathways: (i) in a canonical pathway serotonin acts via its receptor 5HTR1B to modulate mitochondrial function, and (ii) in a non-canonical pathway serotonin promotes serotonylation of HSP90β, which effectively reduces endoplasmic reticulum stress. Overall, our study demonstrates that oocyte-enriched metabolites including serotonin can alleviate aging-related cellular and systemic phenotypes, suggesting new avenues for anti-aging strategies.
doi.org
July 16, 2026 at 9:41 AM
Development of a Tapping-Mode Scanning Probe Electrospray Ionization Platform for High-Sensitivity and Long-Term Stability in Single-Cell Mass Spectrometry Imaging of Tissue | Analytical Chemistry pubs.acs.org/doi/10.1021/...
Development of a Tapping-Mode Scanning Probe Electrospray Ionization Platform for High-Sensitivity and Long-Term Stability in Single-Cell Mass Spectrometry Imaging of Tissue
To elucidate disease mechanisms, it is essential to develop analytical techniques capable of visualizing cellular heterogeneity in biological tissues. Mass spectrometry imaging (MSI) allows simultaneous visualization of multiple biomolecules in tissue sections in a single measurement. However, achieving single-cell (SC)-MSI requires high ion detection sensitivity and long-term ionization stability. Tapping-mode scanning probe electrospray ionization (t-SPESI) delivers a tiny amount of solvent from an oscillating fused silica capillary probe to the sample surface, enabling rapid extraction and ionization of analytes. In this study, we developed a t-SPESI measurement system and a chemical modification method for the probe surface to enable SC-MSI of biological tissues. Introducing a compact sample stage shortened the ion transfer tube to the mass spectrometer, thereby increasing ion detection sensitivity. Furthermore, forming a fluorine-containing molecular layer on the probe surface suppressed biomolecule adsorption at the probe tip and increased the long-term stability of solvent delivery. SC-MSI of mouse brain sections was performed at pixel sizes of 10 and 5 μm and visualized lipid distributions corresponding to fine tissue structures. These results demonstrate that the combination of system miniaturization and probe surface modification is an effective strategy for achieving high-sensitivity and long-term stable SC-MSI via t-SPESI, providing a robust platform for investigating cellular heterogeneity in biological tissues.
pubs.acs.org
July 10, 2026 at 12:29 PM
Reposted by Emerald Perlas 🇵🇭🇺🇸🇮🇹
A nucleic acid labeling chemistry reveals surface DNA on exosomes | PNAS www.pnas.org/doi/10.1073/... 🧪
A nucleic acid labeling chemistry reveals surface DNA on exosomes | PNAS
Chemical labeling of nucleic acids is essential to pinpoint the structure, localization, and function of RNA and DNA. Yet, reversible sequence-inde...
www.pnas.org
July 9, 2026 at 5:05 PM
Serial sections of e7.0 epiblast within the decidua showing Otx2 expression in the anterior neuroectoderm

#FluorescenceFriday
#DevelopmentalBiology
July 3, 2026 at 2:33 PM
Reposted by Emerald Perlas 🇵🇭🇺🇸🇮🇹
How does aging reshape a tissue that must continually rebuild itself hundreds of times?

Our latest: Using spatial transcriptomics, we find that ovarian aging disrupts the coordination of cells across space and time before reproductive cycles stop.

#OvarianAging
June 19, 2026 at 7:56 PM
Reposted by Emerald Perlas 🇵🇭🇺🇸🇮🇹
Mapping embryonic and placental defects in 22 knockout mouse lines

This Research Highlight showcases work by Taylor Guertin, Kim Tremblay and colleagues.

journals.biologists.com/dev/article/...
June 9, 2026 at 9:48 AM
A Hormone Cell Atlas maps the human endocrine system at cellular resolution | Science www.science.org/doi/10.1126/...
A Hormone Cell Atlas maps the human endocrine system at cellular resolution
Hormones act across tissues and organs to coordinate physiological functions. Drawing inspiration from the Human Cell Atlas, we analyzed expression of 379 hormone and receptor genes in a transcriptomi...
www.science.org
June 5, 2026 at 9:32 AM
Reposted by Emerald Perlas 🇵🇭🇺🇸🇮🇹
Learning immunology from mothers and babies www.sciencedirect.com/science/arti... The maternal-fetal dyad can reveal strategies for improving pregnancy outcomes, but also how immunology works applicable to many other physiological contexts @mucosalimmunol.bsky.social @societymucosalimm.bsky.social
Learning immunology from mothers and babies
Pregnancy is an immunological marvel allowing intimate approximation between genetically discordant tissues of maternal and fetal origin. Shared immun…
www.sciencedirect.com
June 4, 2026 at 12:46 PM
Reposted by Emerald Perlas 🇵🇭🇺🇸🇮🇹
Domani a Roma!
June 4, 2026 at 5:27 AM
Reposted by Emerald Perlas 🇵🇭🇺🇸🇮🇹
On this day 80 years ago, women in Italy voted for the first time at national level, in a landmark referendum that led to the birth of the Italian Republic. The historic day is marked in Italy every year with the Festa della Repubblica holiday on 2 June.
How women’s first national vote in Italy forged a Republic
On 2 June 1946, millions of Italian women made history by entering polling stations to cast their first votes at a national level in a landmark referendum.
www.wantedinrome.com
June 2, 2026 at 5:09 AM
The choreography of development: RNA localization across time and space journals.biologists.com/dev/article-...
The choreography of development: RNA localization across time and space
Summary: This Review highlights developmental roles for RNA localization in cell polarity, fate and function across model organisms.
journals.biologists.com
June 2, 2026 at 1:39 PM
The temporal architecture of the seminiferous epithelial cycle revealed by spatial transcriptomics

www.sciencedirect.com/science/arti...
The temporal architecture of the seminiferous epithelial cycle revealed by spatial transcriptomics
Spermatogenesis features the seminiferous epithelial cycle, a periodic progression of germ-cell differentiation along the seminiferous tubules. Using …
www.sciencedirect.com
May 26, 2026 at 9:50 AM
"Specifically, a long non-coding RNA transcribed from this DNA region in the fungal pathogen Magnaporthe oryzae translocates into host rice cells and sequesters a complementary microRNA (miRNA), derived from a distinct host DNA region, thereby subverting host immunity."

rdcu.be/fjWfA
A pathogen lncRNA secreted into rice sequesters a host miRNA for virulence
Nature - A fungal long non-coding RNA from Magnaporthe oryzae translocates into rice cells to sequester a host microRNA that normally represses PKR1, a negative immunity regulator, thereby...
rdcu.be
May 21, 2026 at 8:19 AM