Jasper Gomez
jasgomez.bsky.social
Jasper Gomez
@jasgomez.bsky.social
Postdoc in Vaughn Coopers lab @ University of Pittsburgh. Interested in phages, microbes, evolution and phage therapy.
Reposted by Jasper Gomez
A nice timeline of the #LTEE in the #MSU Spartan #Science magazine:
spartanscience.natsci.msu.edu/evolution-in...
spartanscience.natsci.msu.edu
September 9, 2026 at 11:49 PM
My PhD work with my awesome mentor Chris Waters and collaborator Jeff Barrick looking at how phages encode contingency loci to overcome phage defense systems and potentially other stresses via phase variation is out! www.nature.com/articles/s41...
Phage-encoded contingency loci enable bet-hedging against host defence mechanisms - Nature Microbiology
Diverse E. coli phage genomes have hypermutable DNA regions that promote reversible frameshift mutations through DNA polymerase slippage, generating population heterogeneity that enables host exploita...
www.nature.com
August 15, 2026 at 1:20 PM
Reposted by Jasper Gomez
Pittsburgh Post-Gazette story about the recent NIH grant terminations.

www.post-gazette.com/news/educati...

1/3
So far, terminated NIH grants have cost University of Pittsburgh $40 million
The federal government has unexpectedly ended two more research grants at the University of Pittsburgh, which in one case, upends 16 years of research...
www.post-gazette.com
August 6, 2026 at 11:55 PM
Reposted by Jasper Gomez
New preprint: "A branching cell-fate decision in biofilm dispersal enables long-term surface persistence." When V. cholerae biofilms disperse, it isn’t a uniform exit, rather, an opportunity to bet-hedge. A subpopulation of cells stay behind, primed for biofilm regrowth. doi.org/10.64898/202...
April 29, 2026 at 1:22 PM
Reposted by Jasper Gomez
Project Hail Mary is a beautiful brilliant film. But molecular biologists be warned there's a deeply disturbing scene midway through when Ryan Gosling's scientist places two eppendorfs directly next to each other in an otherwise empty unbalanced microcentrifuge & sets it spinning with wild abandon.
March 29, 2026 at 7:32 PM
Reposted by Jasper Gomez
Given that clonal biofilms of single bacterial species rapidly diversify into niche specialists, how do biofilms of multiple species evolve?
A 🧵 featuring new collaborative pubs:
1. www.biorxiv.org/content/10.6...
2. www.nature.com/articles/s41...
www.biorxiv.org
March 1, 2026 at 6:53 PM
Reposted by Jasper Gomez
February 27, 2026 at 5:49 PM
Reposted by Jasper Gomez
Happy 38th birthday to the #LTEE!
#BOTD in 1988.
Keep on evolving!

#science #evolution #microbiology
February 24, 2026 at 3:20 PM
Reposted by Jasper Gomez
The only thing more powerful than hate is love!
February 9, 2026 at 1:32 AM
Reposted by Jasper Gomez
Handing the kid the Grammy was cute
February 9, 2026 at 1:29 AM
Reposted by Jasper Gomez
Congratulations to our graduates! We are so proud of you and can't wait to see the great things you will accomplish!
December 15, 2025 at 8:20 PM
Reposted by Jasper Gomez
Trifecta!!! Three superb dissertation seminars in one week:
⭐ Jasper Gomez on Friday, working with Chris Waters.
⭐ Devin Lake yesterday, with me.
⭐ Beth Ottosen today, with Vic DiRita.

@jasgomez.bsky.social
@devinmlake.bsky.social
@msumgi.bsky.social
@waterslab
Congratulations to MGI's newest Ph.D. graduate, Dr. Beth Ottosen!
November 5, 2025 at 10:24 PM
Reposted by Jasper Gomez
Congratulations to DOCTOR Devin Lake, who successfully defended his Ph.D. and gave a splendid seminar this afternoon! His dissertation is titled: "Evolutionary Dynamics in Asexual Populations: The Interplay of Theory, Experiments, and Simulations." 

@devinmlake.bsky.social
November 4, 2025 at 11:50 PM
Reposted by Jasper Gomez
I don't understand why groups design plasmids, publish protocol papers centered on their use, and then not deposit them to Addgene.

Open, reproducible science should be our North Star, not an afterthought (or worse, never considered at all).
October 22, 2025 at 2:06 PM
Reposted by Jasper Gomez
Phages use contingency loci as a bet-hedging strategy https://www.biorxiv.org/content/10.1101/2025.10.21.683753v1
October 22, 2025 at 3:16 AM
Reposted by Jasper Gomez
Published in Current Biology! P. aeruginosa can use its filamentous phage to inhibit competitors but high phage production is susceptible to cheater miniphage invasion. Subsequent phage tragedy of the commons can lower bacteria and phage fitness. Link: authors.elsevier.com/c/1lt5I3QW8S...
October 2, 2025 at 3:54 PM
Reposted by Jasper Gomez
I am DEEPLY SYMPATHETIC that the NIH staff are working desperately hard in the hurt locker. I am grateful that they hold the fort.

But, to the admin: YOU BROKE IT, YOU BOUGHT IT. Most folks want tax $ to support this work, and they will vote accordingly if they know about this. Share and speak up!
August 19, 2025 at 7:29 PM
Reposted by Jasper Gomez
I couldn’t be more proud of STEPS! Hats off to Zach, Mina, and Rich (@relenski.bsky.social) for all their hard work on the project. I look forward to adding new features and fighting with inevitable bugs in the future!
Excited to share new #program, STEPS, which can simulate #dynamics of the E. coli Long-Term Evolution Experiment (#LTEE) or other microbes in serial transfer regime.

telliamedrevisited.wordpress.com/2025/08/12/s...

STEPS developed by @devinmlake.bsky.social, Zachary Matson, Minako Izutsu, and me.
STEPS To It
Announcing a new program, called STEPS, to simulate the dynamics of evolving microbial populations.
telliamedrevisited.wordpress.com
August 12, 2025 at 5:43 PM
Reposted by Jasper Gomez
Dr. Aathmaja Rangarajan, an MGI postdoctoral researcher in the Waters Lab, shares highlights of her first trip to ASM Microbe last week. The trip was supported by the ASM Peggy Cotter Travel Award.

Read more here: tinyurl.com/rwdmcnm
June 30, 2025 at 2:51 PM
Reposted by Jasper Gomez
Hey folks in academic world:

be nice & respectful to the invited speakers. That includes: students, postdocs, & early career scientists.

If you are disrespectful, know that this world is round & Karma will catch up w you very quick.
June 30, 2025 at 5:06 PM
Reposted by Jasper Gomez
Excited to attend my first ASM microbe this year at LA. Will be presenting my postdoctoral work from Waters lab on "Zinc regulation of cyclic di-GMP in V. Cholerae" in Room 408B from 3.30-3.45 on June 20th. Looking forward to seeing you all there. #asm2025
June 19, 2025 at 11:17 PM
Excited to be representing the Waters lab alongside @aathmaja.bsky.social at #ASMicrobe!

Interested how phages use contingency loci as bet hedging strategy?

I’ll be talking about this Sat 6/21 from 10-10:15am at “Predicting Microbial Evolution” 403A, LACC
June 19, 2025 at 10:43 PM