Matthieu Haudiquet
matthieu-haudiquet.bsky.social
Matthieu Haudiquet
@matthieu-haudiquet.bsky.social
Permanent researcher @inserm.fr

@pasteur.fr × @institutcurie.bsky.social
Studying ancestral immunity: bacterial anti-phage systems → human innate immunity.
Reposted by Matthieu Haudiquet
#microsky
New preprint from the lab!
Widespread immune systems protect bacteria against conjugative plasmids
www.biorxiv.org/content/10.6...
Kudos to the extremely talented lead author Ludovic Poiré! Key contributions by @francoisrousset.bsky.social and also help from C. Lesterlin/TacC lab.
🧵⬇️
Widespread immune systems protect bacteria against conjugative plasmids
Conjugative plasmids are a class of mobile genetic elements capable of efficient transfer between bacterial cells. Although they can introduce beneficial traits such as antibiotic resistance to recipi...
www.biorxiv.org
July 7, 2026 at 7:58 AM
Reposted by Matthieu Haudiquet
Great piece and cover @science.org about how our field is uncovering the evolutionary and mechanistic connections between bacterial and eukaryotic immunity !
www.science.org/content/article/ancient-wars-between-microbes-gave-us-key-immune-defenses
May 22, 2026 at 7:10 AM
Reposted by Matthieu Haudiquet
Here's the link to the preprint:
www.biorxiv.org/content/10.6...
Looking forward to discussing the story with folks at #SISB2026 this week! 🦠
May 4, 2026 at 11:28 AM
Reposted by Matthieu Haudiquet
That's a wrap on three days of incredible science at #SISB2026! Special thanks to @rockefeller.edu for hosting us on their beautiful campus, to our speakers and poster presenters, and most of all to this community that never fails to inspire. Can't wait for #SISB2027 🫶
May 8, 2026 at 1:55 PM
Reposted by Matthieu Haudiquet
🧬🛡️How are new immune mechanisms created?

We show how Lamassu antiphage system, originated from a DNA-repair complex and evolved into a compact and modular immune machine, wt Dinshaw Patel lab in @pnas.org.
👏 @matthieu-haudiquet.bsky.social, Arpita Chakravarti & all authors!

doi.org/10.1073/pnas...
November 27, 2025 at 9:35 AM
Reposted by Matthieu Haudiquet
So great to see the work of the lab being brillantly presented at conferences across 🇮🇹🍦🍝, @matthieu-haudiquet.bsky.social on Evolution and Mechanism of Lamassu in FEMS, Milan and Ernest Mordret on LLM for prediction of antiphage systems in GRC Evolutionary Genomics,Tuscany.
Check out their work 👇
July 17, 2025 at 5:39 PM
Reposted by Matthieu Haudiquet
Here's our new broad review on the extended mobility of plasmids, about all mechanisms driving and limiting their transfer. From conjugation to conduction, phage-plasmids to hitchers, molecular to evolutionary dynamics, ecology to biotech. The state of affairs. 1/9 academic.oup.com/nar/article/...
July 23, 2025 at 7:35 AM
Reposted by Matthieu Haudiquet
It was an honor for my lab and myself to host the meeting on the Immune Systems of Bacteria. Such a high from all the incredible science and sharing with scientists from the whole world the greatness of Paris in the spring.
Vive la science, et vive Paris!
April 11, 2025 at 3:46 PM
Reposted by Matthieu Haudiquet
The Institut Pasteur has decided to leave X (formerly Twitter) to join BlueSky! 🦋
The Institut Pasteur made this decision due to several serious issues observed on the X platform since its acquisition. Join us here to continue advocating for science. www.pasteur.fr/en/home/pres...
Institut Pasteur decides to leave X
The Institut Pasteur, a research organization which for more than 130 years has been committed to tackling infectious diseases, sharing knowledge and defending science, has decided to leave X because ...
www.pasteur.fr
January 16, 2025 at 9:18 AM
Reposted by Matthieu Haudiquet
Out in NAR, AntiDefenseFinder & our "systematic" analysis of inhibitors of antiphage systems wt Bondy-Denomy lab led by @ftesson.bsky.social and E. Huiting.

Not so "systematic" as very few known, fun stuff on MGE, antidefense islands and cool phages exaptations!

academic.oup.com/nar/advance-...
Exploring the diversity of anti-defense systems across prokaryotes, phages and mobile genetic elements
Abstract. The co-evolution of prokaryotes, phages and mobile genetic elements (MGEs) has driven the diversification of defense and anti-defense systems ali
academic.oup.com
December 16, 2024 at 8:53 AM