Steve Baeyen
@stevebaeyen.bsky.social
bio-informatican @ ILVO for Plant Health, EU Reference Laboratory for bacterial diseases of plants
🌱 New blog post: Comparative Genomics for Phytobacteriology
In this practical guide, I cover core genomes, pan-genomes, SNP phylogenomics, key software tools, and typical workflows used in bacterial plant pathology.
📖 stevebaeyen.github.io/blog/2026/Co...
#Bioinformatics
In this practical guide, I cover core genomes, pan-genomes, SNP phylogenomics, key software tools, and typical workflows used in bacterial plant pathology.
📖 stevebaeyen.github.io/blog/2026/Co...
#Bioinformatics
July 14, 2026 at 12:42 PM
🌱 New blog post: Comparative Genomics for Phytobacteriology
In this practical guide, I cover core genomes, pan-genomes, SNP phylogenomics, key software tools, and typical workflows used in bacterial plant pathology.
📖 stevebaeyen.github.io/blog/2026/Co...
#Bioinformatics
In this practical guide, I cover core genomes, pan-genomes, SNP phylogenomics, key software tools, and typical workflows used in bacterial plant pathology.
📖 stevebaeyen.github.io/blog/2026/Co...
#Bioinformatics
🧬 New blog post: Phage genome assembly with Snakemake
pipelines tailored for bacteriophage genome assembly (Illumina, Nanopore), and why phages don’t fit standard bacterial workflows.
👉 stevebaeyen.github.io/blog/2026/ph...
#Bioinformatics #Snakemake #PhageGenomics
pipelines tailored for bacteriophage genome assembly (Illumina, Nanopore), and why phages don’t fit standard bacterial workflows.
👉 stevebaeyen.github.io/blog/2026/ph...
#Bioinformatics #Snakemake #PhageGenomics
BioBits by Steve | Two New Snakemake Pipelines for Bacteriophage Assembly and QC: Illumina and Nanopore
BioBits by Steve is a personal website and blog dedicated to modern bioinformatics. It features insights, tutorials, and resources for bioinformatics enthusiasts and professionals working in genomics,...
stevebaeyen.github.io
April 3, 2026 at 3:28 PM
🧬 New blog post: Phage genome assembly with Snakemake
pipelines tailored for bacteriophage genome assembly (Illumina, Nanopore), and why phages don’t fit standard bacterial workflows.
👉 stevebaeyen.github.io/blog/2026/ph...
#Bioinformatics #Snakemake #PhageGenomics
pipelines tailored for bacteriophage genome assembly (Illumina, Nanopore), and why phages don’t fit standard bacterial workflows.
👉 stevebaeyen.github.io/blog/2026/ph...
#Bioinformatics #Snakemake #PhageGenomics
🚀 Just launched: run_epcr.py
Batch in-silico (q)PCR for genome analysis—fast, flexible, and open-source!
🔗 Blog: stevebaeyen.github.io/blog/2025/run-epcr
💻 GitLab: gitlab.ilvo.be/stevebaeyen/run_epcr
#Bioinformatics #Genomics #PCR #PythonTools #ILVO
Batch in-silico (q)PCR for genome analysis—fast, flexible, and open-source!
🔗 Blog: stevebaeyen.github.io/blog/2025/run-epcr
💻 GitLab: gitlab.ilvo.be/stevebaeyen/run_epcr
#Bioinformatics #Genomics #PCR #PythonTools #ILVO
August 6, 2025 at 2:10 PM
🚀 Just launched: run_epcr.py
Batch in-silico (q)PCR for genome analysis—fast, flexible, and open-source!
🔗 Blog: stevebaeyen.github.io/blog/2025/run-epcr
💻 GitLab: gitlab.ilvo.be/stevebaeyen/run_epcr
#Bioinformatics #Genomics #PCR #PythonTools #ILVO
Batch in-silico (q)PCR for genome analysis—fast, flexible, and open-source!
🔗 Blog: stevebaeyen.github.io/blog/2025/run-epcr
💻 GitLab: gitlab.ilvo.be/stevebaeyen/run_epcr
#Bioinformatics #Genomics #PCR #PythonTools #ILVO
🧬 Just dropped my first blog post on BioBits by Steve!
A look at how I’ve evolved from classic Bash scripting to AI-assisted coding with GitHub Copilot.
📖 Read it here: stevebaeyen.github.io
#Bioinformatics #AItools #GitHubCopilot #TerminalLife #BioBitsBySteve
A look at how I’ve evolved from classic Bash scripting to AI-assisted coding with GitHub Copilot.
📖 Read it here: stevebaeyen.github.io
#Bioinformatics #AItools #GitHubCopilot #TerminalLife #BioBitsBySteve
July 29, 2025 at 5:05 PM
🧬 Just dropped my first blog post on BioBits by Steve!
A look at how I’ve evolved from classic Bash scripting to AI-assisted coding with GitHub Copilot.
📖 Read it here: stevebaeyen.github.io
#Bioinformatics #AItools #GitHubCopilot #TerminalLife #BioBitsBySteve
A look at how I’ve evolved from classic Bash scripting to AI-assisted coding with GitHub Copilot.
📖 Read it here: stevebaeyen.github.io
#Bioinformatics #AItools #GitHubCopilot #TerminalLife #BioBitsBySteve
Reposted by Steve Baeyen
"More than 1,200 scientists who responded to a Nature poll — three-quarters of the total respondents — are considering leaving the United States following the disruptions prompted by Trump" 🧪
www.nature.com/articles/d41...
www.nature.com/articles/d41...
March 27, 2025 at 2:42 PM
"More than 1,200 scientists who responded to a Nature poll — three-quarters of the total respondents — are considering leaving the United States following the disruptions prompted by Trump" 🧪
www.nature.com/articles/d41...
www.nature.com/articles/d41...
I was finally able to unbox my new Minion MkID nanopore sequencer, ready to discover new organisms and much more. #Science
@nanoporetech.com
#Discovery
#ILVO
@nanoporetech.com
#Discovery
#ILVO
February 11, 2025 at 10:43 AM
I was finally able to unbox my new Minion MkID nanopore sequencer, ready to discover new organisms and much more. #Science
@nanoporetech.com
#Discovery
#ILVO
@nanoporetech.com
#Discovery
#ILVO