Character of the Day: J-3DI
November 23, 2024 at 2:29 PM
Character of the Day: J-3DI
Unicore identifies single-copy protein structures across genomes using Foldseek, bypassing slow structure predictions by utilizing 3Di predictions from ProstT5, enabling rapid phylogenetic inference at the tree-of-life scale. 1/n
📄 www.biorxiv.org/content/10.1...
💾 github.com/steineggerla...
📄 www.biorxiv.org/content/10.1...
💾 github.com/steineggerla...
December 23, 2024 at 4:39 PM
Unicore identifies single-copy protein structures across genomes using Foldseek, bypassing slow structure predictions by utilizing 3Di predictions from ProstT5, enabling rapid phylogenetic inference at the tree-of-life scale. 1/n
📄 www.biorxiv.org/content/10.1...
💾 github.com/steineggerla...
📄 www.biorxiv.org/content/10.1...
💾 github.com/steineggerla...
J-3DI, the Jedi droid
September 18, 2025 at 3:13 AM
J-3DI, the Jedi droid
making up a 90s cd-based console called the Panavox 3Di
February 4, 2026 at 4:32 AM
making up a 90s cd-based console called the Panavox 3Di
Fast protein structure searches with Foldseek using 3Di tokens. Did you experiment with FoldTokens?
December 9, 2024 at 6:59 PM
Fast protein structure searches with Foldseek using 3Di tokens. Did you experiment with FoldTokens?
August 22, 2025 at 12:20 PM
to doente serio chamem a ambulancia agora open.spotify.com/playlist/3di...
shari
open.spotify.com
October 5, 2024 at 7:34 PM
to doente serio chamem a ambulancia agora open.spotify.com/playlist/3di...
The seventh oral presentation of today with Michel van Kempen: "Extending 3Di: Increasing Protein Structure Search Sensitivity with a Complementary Alphabet" @iscb.bsky.social #ISMB_ECCB2025 #3DSIG
July 21, 2025 at 4:41 PM
The seventh oral presentation of today with Michel van Kempen: "Extending 3Di: Increasing Protein Structure Search Sensitivity with a Complementary Alphabet" @iscb.bsky.social #ISMB_ECCB2025 #3DSIG
Shields are dropping...goes back to 3DI ATLAS ...they can't keep this simulation going much longer
Since there’s implications of cannibalism in the Epstein files, we’re probably close to it now.
June 27, 2026 at 7:29 PM
Shields are dropping...goes back to 3DI ATLAS ...they can't keep this simulation going much longer
3di Atlas is feeding your su
n higher consciousness, and this will cause sun flares to radiate to earth. Earthquakes will also become more common
n higher consciousness, and this will cause sun flares to radiate to earth. Earthquakes will also become more common
October 9, 2025 at 8:53 PM
3di Atlas is feeding your su
n higher consciousness, and this will cause sun flares to radiate to earth. Earthquakes will also become more common
n higher consciousness, and this will cause sun flares to radiate to earth. Earthquakes will also become more common
3di Atlas is here to prepare us to move to 5D earth. The Religious call it the rapture or ascension, but dont be fearful, be celebratory ..
This is the end for 3d earth
This is the end for 3d earth
October 9, 2025 at 8:48 PM
3di Atlas is here to prepare us to move to 5D earth. The Religious call it the rapture or ascension, but dont be fearful, be celebratory ..
This is the end for 3d earth
This is the end for 3d earth
The key development is the 3Di structural alphbet, developed by @martinsteinegger.bsky.social et al. 3Di allows a structural 'sequence' to be derived from a protein structure and was developed for remote homology searches.
June 11, 2025 at 2:01 PM
The key development is the 3Di structural alphbet, developed by @martinsteinegger.bsky.social et al. 3Di allows a structural 'sequence' to be derived from a protein structure and was developed for remote homology searches.
A l'occasion du stage collectif de 3e, je retombe sur mon cours de Pico-8 d'introduction à la programmation et à la petite console virtuelle.
Peut-être que ça intéressera quelques autres personnes !
github.com/valryon/3di-...
#gamedev #pico8
Peut-être que ça intéressera quelques autres personnes !
github.com/valryon/3di-...
#gamedev #pico8
github.com
January 23, 2026 at 1:04 PM
A l'occasion du stage collectif de 3e, je retombe sur mon cours de Pico-8 d'introduction à la programmation et à la petite console virtuelle.
Peut-être que ça intéressera quelques autres personnes !
github.com/valryon/3di-...
#gamedev #pico8
Peut-être que ça intéressera quelques autres personnes !
github.com/valryon/3di-...
#gamedev #pico8
Baktfold: Sensitive protein functional annotation across the microbial tree of life using structural information [new]
Annotates microbial proteins via struct info, converts seqs to 3Di tokens for DB searches to ID hypothetical ones.
Annotates microbial proteins via struct info, converts seqs to 3Di tokens for DB searches to ID hypothetical ones.
April 2, 2026 at 6:45 AM
Baktfold: Sensitive protein functional annotation across the microbial tree of life using structural information [new]
Annotates microbial proteins via struct info, converts seqs to 3Di tokens for DB searches to ID hypothetical ones.
Annotates microbial proteins via struct info, converts seqs to 3Di tokens for DB searches to ID hypothetical ones.
Maximum likelihood structural phylogeny beyond the twilight zone by combining Foldseek's 3Di alphabet with AA alignments. ML trees resolve the topology of distantly related proteins where traditional AA methods fall short.
📄 www.biorxiv.org/content/10.1...
💾 github.com/nmatzke/3diphy
📄 www.biorxiv.org/content/10.1...
💾 github.com/nmatzke/3diphy
December 14, 2023 at 6:50 PM
Maximum likelihood structural phylogeny beyond the twilight zone by combining Foldseek's 3Di alphabet with AA alignments. ML trees resolve the topology of distantly related proteins where traditional AA methods fall short.
📄 www.biorxiv.org/content/10.1...
💾 github.com/nmatzke/3diphy
📄 www.biorxiv.org/content/10.1...
💾 github.com/nmatzke/3diphy
What the fuck are they hiding? Bet it has to do with 3DI Atlas
Anyone in?
Trump fires the entire National Science Board
www.theverge.com/science/9187...
Anyone in?
Trump fires the entire National Science Board
www.theverge.com/science/9187...
Trump fires the entire National Science Board
Federal funding for scientific research was already in turmoil.
www.theverge.com
April 27, 2026 at 1:50 AM
What the fuck are they hiding? Bet it has to do with 3DI Atlas
Anyone in?
Trump fires the entire National Science Board
www.theverge.com/science/9187...
Anyone in?
Trump fires the entire National Science Board
www.theverge.com/science/9187...
youtu.be/8mGroy8-3DI?... im throwing money to make a WoL AMV set to this song
FFXIV - Everything Burns (Arcadion) エヴリシング バーンズ
YouTube video by Axiom
youtu.be
December 16, 2025 at 4:39 PM
youtu.be/8mGroy8-3DI?... im throwing money to make a WoL AMV set to this song
La Colombie et le Panama frappés par un séisme de magnitude 6,6 : les dernières infos
➡️ https://l.humanite.fr/3dI
➡️ https://l.humanite.fr/3dI
August 10, 2026 at 3:02 PM
La Colombie et le Panama frappés par un séisme de magnitude 6,6 : les dernières infos
➡️ https://l.humanite.fr/3dI
➡️ https://l.humanite.fr/3dI
New 3Di #3 jib!
August 23, 2025 at 5:42 PM
New 3Di #3 jib!
bro the ultraleap 3di is such a scam
cause like what do you mean it's only usb 2.0???
my gen 1 leap motion does a better job in almost every regard 😭
cause like what do you mean it's only usb 2.0???
my gen 1 leap motion does a better job in almost every regard 😭
June 2, 2025 at 3:05 PM
bro the ultraleap 3di is such a scam
cause like what do you mean it's only usb 2.0???
my gen 1 leap motion does a better job in almost every regard 😭
cause like what do you mean it's only usb 2.0???
my gen 1 leap motion does a better job in almost every regard 😭
FFXIV - Everything Burns (Arcadion) エヴリシング バーンズ
YouTube video by Axiom
youtu.be
December 16, 2025 at 1:14 PM
