📢 Interested in #FAIR biomolecular simulation #workflows?
Join us for our next #webinar to hear the latest developments to the BioExcel Building Blocks (BioBB) library
🗓️ 3 November at 15:00 CET
✍️ bioexcel.eu/tca7
@irbbarcelona.org
#compchem
Join us for our next #webinar to hear the latest developments to the BioExcel Building Blocks (BioBB) library
🗓️ 3 November at 15:00 CET
✍️ bioexcel.eu/tca7
@irbbarcelona.org
#compchem
October 21, 2026 at 11:35 AM
📢 Interested in #FAIR biomolecular simulation #workflows?
Join us for our next #webinar to hear the latest developments to the BioExcel Building Blocks (BioBB) library
🗓️ 3 November at 15:00 CET
✍️ bioexcel.eu/tca7
@irbbarcelona.org
#compchem
Join us for our next #webinar to hear the latest developments to the BioExcel Building Blocks (BioBB) library
🗓️ 3 November at 15:00 CET
✍️ bioexcel.eu/tca7
@irbbarcelona.org
#compchem
😲 #Deadline is approaching... Don't miss your chance to join the @bioexcelcoe.bsky.social #summer#school on #biomolecular #simulations in #sardinia 🇮🇹 @gromacs.bsky.social #pmx #hadddock #biobb
The deadline for applications to our Summer School on Biomolecular Simulations 2026 is fast approaching ❗️
🧑🎓Learn from the code developers, build your network and present your work
Submit your application by this Sunday 1st February ➡️ bioexcel.eu/4ooy
#training
🧑🎓Learn from the code developers, build your network and present your work
Submit your application by this Sunday 1st February ➡️ bioexcel.eu/4ooy
#training
January 28, 2026 at 12:11 PM
😲 #Deadline is approaching... Don't miss your chance to join the @bioexcelcoe.bsky.social #summer#school on #biomolecular #simulations in #sardinia 🇮🇹 @gromacs.bsky.social #pmx #hadddock #biobb
BioExcelCoE on tour at the EU-ASEAN HPC school in Indonesia. We will demonstrate in computer practicals our #BioBB and #HADDOCK software on the Japanese #Fugaku supercomputer - hpcschool.net
December 12, 2023 at 2:53 AM
BioExcelCoE on tour at the EU-ASEAN HPC school in Indonesia. We will demonstrate in computer practicals our #BioBB and #HADDOCK software on the Japanese #Fugaku supercomputer - hpcschool.net
Run GROMACS from python #MD #BioBB #memo
Happy new year! I hope readers have great end-year holiday. And this is the first post of 2025 of my blog site. My background is medicinal and organic chemistry and cheminformatics. And I'm not so familier with MD(Molecular Dynamics). But recenlty I'm…
Happy new year! I hope readers have great end-year holiday. And this is the first post of 2025 of my blog site. My background is medicinal and organic chemistry and cheminformatics. And I'm not so familier with MD(Molecular Dynamics). But recenlty I'm…
Run GROMACS from python #MD #BioBB #memo
Happy new year! I hope readers have great end-year holiday. And this is the first post of 2025 of my blog site. My background is medicinal and organic chemistry and cheminformatics. And I'm not so familier with MD(Molecular Dynamics). But recenlty I'm interested in not only informatics but also MD. Recently I found an interesting project named 'BioBB'. From original site, '
iwatobipen.wordpress.com
January 3, 2025 at 9:30 AM
!!!Deadline extended to Dec 20th!!!
Apply to participate to the workshop on BioExcel Software Tools (11-12 Feb 2026, Ljubljana).
A series of great lectures and tutorials will on BioBB, HADDOCK and PMX!
More information here: indico.ijs.si/event/3159/
See you in Ljubljana!
Apply to participate to the workshop on BioExcel Software Tools (11-12 Feb 2026, Ljubljana).
A series of great lectures and tutorials will on BioBB, HADDOCK and PMX!
More information here: indico.ijs.si/event/3159/
See you in Ljubljana!
Workshop on BioExcel Software Tools
This 1.5-day organized workshop within Adriatic Edition of Bioexcel offers a hands-on introduction to modern computational tools and workflows in biomolecular simulations. Participants (primarily from...
indico.ijs.si
December 10, 2025 at 6:09 PM
!!!Deadline extended to Dec 20th!!!
Apply to participate to the workshop on BioExcel Software Tools (11-12 Feb 2026, Ljubljana).
A series of great lectures and tutorials will on BioBB, HADDOCK and PMX!
More information here: indico.ijs.si/event/3159/
See you in Ljubljana!
Apply to participate to the workshop on BioExcel Software Tools (11-12 Feb 2026, Ljubljana).
A series of great lectures and tutorials will on BioBB, HADDOCK and PMX!
More information here: indico.ijs.si/event/3159/
See you in Ljubljana!
🚨 Last Call: Don't Miss Out on the Biomolecular Modeling & Simulations Training!
📅 9–10 April 2025 | 🌐 Hybrid Format
👥 Organised by @bioexcelcoe.bsky.social | @enccs.bsky.social & NCC Türkiye
👉 Register now: indico.truba.gov.tr/event/177/re...
📅 9–10 April 2025 | 🌐 Hybrid Format
👥 Organised by @bioexcelcoe.bsky.social | @enccs.bsky.social & NCC Türkiye
👉 Register now: indico.truba.gov.tr/event/177/re...
Exploring Biomolecular Modeling and Simulations
Organisation: BioExcel, NCC Sweden, and NCC Türkiye in the context of CASTIEL 2 "Training Sprint" Initiative Date: April 9-10, 2025 Registration Deadline: 24 March 2025 Event Type: Training Format: Hybrid (on-site & online) Skill Level: Intermediate Language: English Prerequisites: -Experience in a Linux environment, jupyter notebook, Python, Conda, and BioBB library. -Familiarity with High-Performance Computing (HPC) systems is required for participation in the hands-on sessions. -The...
indico.truba.gov.tr
March 24, 2025 at 4:51 PM
🚨 Last Call: Don't Miss Out on the Biomolecular Modeling & Simulations Training!
📅 9–10 April 2025 | 🌐 Hybrid Format
👥 Organised by @bioexcelcoe.bsky.social | @enccs.bsky.social & NCC Türkiye
👉 Register now: indico.truba.gov.tr/event/177/re...
📅 9–10 April 2025 | 🌐 Hybrid Format
👥 Organised by @bioexcelcoe.bsky.social | @enccs.bsky.social & NCC Türkiye
👉 Register now: indico.truba.gov.tr/event/177/re...
Registration is open for our 6th Ambassador Program hands-on #workshop focused on the use of #GROMACS, #HADDOCK and #BioBB
🗓️ 18-20 November 2026
🌍 Athens, Greece
Info & registration ➡️ bioexcel.eu/a9nq
@ezgikaraca.bsky.social
#ComputerSimulation #moleculardynamics #integrativemodelling #workflows
🗓️ 18-20 November 2026
🌍 Athens, Greece
Info & registration ➡️ bioexcel.eu/a9nq
@ezgikaraca.bsky.social
#ComputerSimulation #moleculardynamics #integrativemodelling #workflows
July 10, 2026 at 6:16 AM
Registration is open for our 6th Ambassador Program hands-on #workshop focused on the use of #GROMACS, #HADDOCK and #BioBB
🗓️ 18-20 November 2026
🌍 Athens, Greece
Info & registration ➡️ bioexcel.eu/a9nq
@ezgikaraca.bsky.social
#ComputerSimulation #moleculardynamics #integrativemodelling #workflows
🗓️ 18-20 November 2026
🌍 Athens, Greece
Info & registration ➡️ bioexcel.eu/a9nq
@ezgikaraca.bsky.social
#ComputerSimulation #moleculardynamics #integrativemodelling #workflows
Don't forget to register for our hands-on #workshop focused on the use of #GROMACS, #PMX and #BioBB
🗓️ 8-9 September 2026
🌍 Gliwice, Poland
🛑 Registration deadline 30 June 2026 ➡️ bioexcel.eu/a0ov
#ComputerSimulation #moleculardynamics #workflows
🗓️ 8-9 September 2026
🌍 Gliwice, Poland
🛑 Registration deadline 30 June 2026 ➡️ bioexcel.eu/a0ov
#ComputerSimulation #moleculardynamics #workflows
June 19, 2026 at 6:10 AM
Don't forget to register for our hands-on #workshop focused on the use of #GROMACS, #PMX and #BioBB
🗓️ 8-9 September 2026
🌍 Gliwice, Poland
🛑 Registration deadline 30 June 2026 ➡️ bioexcel.eu/a0ov
#ComputerSimulation #moleculardynamics #workflows
🗓️ 8-9 September 2026
🌍 Gliwice, Poland
🛑 Registration deadline 30 June 2026 ➡️ bioexcel.eu/a0ov
#ComputerSimulation #moleculardynamics #workflows
Registration is open for our 5th Ambassador Program hands-on #workshop focused on the use of #GROMACS, #PMX and #BioBB
🗓️ 8-9 September 2026
🌍 Gliwice, Poland
More info & registration ➡️ bioexcel.eu/a0ov
@eurocc.bsky.social
#ComputerSimulation #moleculardynamics #workflows
🗓️ 8-9 September 2026
🌍 Gliwice, Poland
More info & registration ➡️ bioexcel.eu/a0ov
@eurocc.bsky.social
#ComputerSimulation #moleculardynamics #workflows
BioExcel / EuroCC workshop on Biomolecular Simulations: Baltic Edition
Registration for this event is open
Our fifth Ambassador Program workshop is jointly organised and supported by our colleagues at the National Competence Centres in Poland. The hands-on workshop is a...
bioexcel.eu
May 28, 2026 at 9:25 AM
Registration is open for our 5th Ambassador Program hands-on #workshop focused on the use of #GROMACS, #PMX and #BioBB
🗓️ 8-9 September 2026
🌍 Gliwice, Poland
More info & registration ➡️ bioexcel.eu/a0ov
@eurocc.bsky.social
#ComputerSimulation #moleculardynamics #workflows
🗓️ 8-9 September 2026
🌍 Gliwice, Poland
More info & registration ➡️ bioexcel.eu/a0ov
@eurocc.bsky.social
#ComputerSimulation #moleculardynamics #workflows
Experience the BioExcel demo booth at the upcoming conference on Advances in Biomolecular Simulations
✅ Live demos of core codes #GROMACS #HADDOCK #PMX #BioBB
✅ Support from experts
✅ ..and more!
✍️𝘙𝘦𝘨𝘪𝘴𝘵𝘳𝘢𝘵𝘪𝘰𝘯: bioexcel.eu/hzr0
✅ Live demos of core codes #GROMACS #HADDOCK #PMX #BioBB
✅ Support from experts
✅ ..and more!
✍️𝘙𝘦𝘨𝘪𝘴𝘵𝘳𝘢𝘵𝘪𝘰𝘯: bioexcel.eu/hzr0
May 20, 2026 at 12:39 PM
Experience the BioExcel demo booth at the upcoming conference on Advances in Biomolecular Simulations
✅ Live demos of core codes #GROMACS #HADDOCK #PMX #BioBB
✅ Support from experts
✅ ..and more!
✍️𝘙𝘦𝘨𝘪𝘴𝘵𝘳𝘢𝘵𝘪𝘰𝘯: bioexcel.eu/hzr0
✅ Live demos of core codes #GROMACS #HADDOCK #PMX #BioBB
✅ Support from experts
✅ ..and more!
✍️𝘙𝘦𝘨𝘪𝘴𝘵𝘳𝘢𝘵𝘪𝘰𝘯: bioexcel.eu/hzr0
Don't miss out!
The registration deadline for our Ambassador Program workshop in Slovenia has been extended until 20 December
➡️ bioexcel.eu/3c00
Lectures and hands-on tutorials covering #BioBB #HADDOCK and #PMX
The registration deadline for our Ambassador Program workshop in Slovenia has been extended until 20 December
➡️ bioexcel.eu/3c00
Lectures and hands-on tutorials covering #BioBB #HADDOCK and #PMX
BioExcel / EuroCC workshop in Slovenia
Registration for this event is open
Our fourth Ambassador Program workshop is jointly organised and supported by our colleagues at the National Competence Centres in Slovenia, Croatia and Italy. The ...
bioexcel.eu
December 9, 2025 at 12:42 PM
Don't miss out!
The registration deadline for our Ambassador Program workshop in Slovenia has been extended until 20 December
➡️ bioexcel.eu/3c00
Lectures and hands-on tutorials covering #BioBB #HADDOCK and #PMX
The registration deadline for our Ambassador Program workshop in Slovenia has been extended until 20 December
➡️ bioexcel.eu/3c00
Lectures and hands-on tutorials covering #BioBB #HADDOCK and #PMX
Our hands-on #training event for #PhD students and #postdocs wanting to learn #BioBB #HADDOCK and #PMX is taking place:
🗓️ 11-12 February 2026
🌍 Ljubljana, Slovenia
➡️ bioexcel.eu/3c00 (registration closes 10 December)
@eurocc.bsky.social
NCC Slovenia NCC Italy NCC Croatia
🗓️ 11-12 February 2026
🌍 Ljubljana, Slovenia
➡️ bioexcel.eu/3c00 (registration closes 10 December)
@eurocc.bsky.social
NCC Slovenia NCC Italy NCC Croatia
November 25, 2025 at 8:38 AM
Our hands-on #training event for #PhD students and #postdocs wanting to learn #BioBB #HADDOCK and #PMX is taking place:
🗓️ 11-12 February 2026
🌍 Ljubljana, Slovenia
➡️ bioexcel.eu/3c00 (registration closes 10 December)
@eurocc.bsky.social
NCC Slovenia NCC Italy NCC Croatia
🗓️ 11-12 February 2026
🌍 Ljubljana, Slovenia
➡️ bioexcel.eu/3c00 (registration closes 10 December)
@eurocc.bsky.social
NCC Slovenia NCC Italy NCC Croatia
📢 Our Ambassador Program Adriatic Edition workshop is open for registration ➡️ bioexcel.eu/3c00
Lectures and hands-on tutorials covering #BioBB #HADDOCK and #PMX
🗓️ 11-12 February 2026
🌍 Ljubljana, Slovenia
In collaboration with @euroccslovakia.bsky.social EuroCC Italy EuroCC Croatia
Lectures and hands-on tutorials covering #BioBB #HADDOCK and #PMX
🗓️ 11-12 February 2026
🌍 Ljubljana, Slovenia
In collaboration with @euroccslovakia.bsky.social EuroCC Italy EuroCC Croatia
BioExcel / EuroCC workshop in Slovenia
Registration for this event is open
Our fourth Ambassador Program workshop is jointly organised and supported by our colleagues at the National Competence Centres in Slovenia, Croatia and Italy. The ...
bioexcel.eu
November 6, 2025 at 8:55 AM
📢 Our Ambassador Program Adriatic Edition workshop is open for registration ➡️ bioexcel.eu/3c00
Lectures and hands-on tutorials covering #BioBB #HADDOCK and #PMX
🗓️ 11-12 February 2026
🌍 Ljubljana, Slovenia
In collaboration with @euroccslovakia.bsky.social EuroCC Italy EuroCC Croatia
Lectures and hands-on tutorials covering #BioBB #HADDOCK and #PMX
🗓️ 11-12 February 2026
🌍 Ljubljana, Slovenia
In collaboration with @euroccslovakia.bsky.social EuroCC Italy EuroCC Croatia
As more scientific journals are starting to require reproducibility before publication #BioBB can become invaluable
Check out our #webinar on BioBB and #FAIR workflows ➡️ bit.ly/3xXBcCm
Check out our #webinar on BioBB and #FAIR workflows ➡️ bit.ly/3xXBcCm
Webinar: Using interactive Jupyter Notebooks and BioConda for FAIR and reproducible biomolecular simulation workflows (2024-05-28)
View slides on Zenodo
Abstract
Interactive Jupyter Notebooks in combination with Conda environments can be used to generate FAIR (Findable, Accessible, Interoperable and Reusable/Reproducible) biomole...
bit.ly
June 12, 2025 at 3:31 PM
As more scientific journals are starting to require reproducibility before publication #BioBB can become invaluable
Check out our #webinar on BioBB and #FAIR workflows ➡️ bit.ly/3xXBcCm
Check out our #webinar on BioBB and #FAIR workflows ➡️ bit.ly/3xXBcCm
The tutorial uses #GROMACS as the simulation engine. Find this and other #workflow examples here ➡ bit.ly/3xzZJ0q
#BioBB enables automated system preparation, simulation and analysis, making your workflows and environment reproducible and #FAIR
#BioBB enables automated system preparation, simulation and analysis, making your workflows and environment reproducible and #FAIR
June 12, 2025 at 3:30 PM
The tutorial uses #GROMACS as the simulation engine. Find this and other #workflow examples here ➡ bit.ly/3xzZJ0q
#BioBB enables automated system preparation, simulation and analysis, making your workflows and environment reproducible and #FAIR
#BioBB enables automated system preparation, simulation and analysis, making your workflows and environment reproducible and #FAIR
Day 4 of the Summer School 2025 was about workflows and protein structure prediction
Adam Hospital introduced BioExcel Building Blocks #BioBB and followed up with a hands-on #tutorial on how to perform protein-ligand complex #moleculardynamics in Jupyter notebooks using BioBB
Adam Hospital introduced BioExcel Building Blocks #BioBB and followed up with a hands-on #tutorial on how to perform protein-ligand complex #moleculardynamics in Jupyter notebooks using BioBB
June 12, 2025 at 3:29 PM
Day 4 of the Summer School 2025 was about workflows and protein structure prediction
Adam Hospital introduced BioExcel Building Blocks #BioBB and followed up with a hands-on #tutorial on how to perform protein-ligand complex #moleculardynamics in Jupyter notebooks using BioBB
Adam Hospital introduced BioExcel Building Blocks #BioBB and followed up with a hands-on #tutorial on how to perform protein-ligand complex #moleculardynamics in Jupyter notebooks using BioBB