On my way to Heidelberg @EMBL #EMBLOmics to present our work. Looking forward!!!
🚨Preprint alert!
tinyurl.com/2zkmynsd
Did you ever dream of reconstruction #spatial single-cell #enhancer activity in a multicellular organism using massively parallel enhancer-reporter assays?
Then Spatial-scERA is the method for you!
#spatialOMICs
tinyurl.com/2zkmynsd
Did you ever dream of reconstruction #spatial single-cell #enhancer activity in a multicellular organism using massively parallel enhancer-reporter assays?
Then Spatial-scERA is the method for you!
#spatialOMICs
Spatial reconstruction of single-cell enhancer activity in a multicellular organism
Enhancers play an essential role in developmental processes by orchestrating the spatial and temporal regulation of gene expression. However, mapping the location of these regulatory elements in the g...
tinyurl.com
November 18, 2024 at 11:06 AM
On my way to Heidelberg @EMBL #EMBLOmics to present our work. Looking forward!!!
QBBM day 2 with a lively posters session and a sunny hike. #EMBLomics
November 21, 2024 at 10:32 AM
QBBM day 2 with a lively posters session and a sunny hike. #EMBLomics
beautiful talk by @jjachowicz.bsky.social sharing new insights on molecular function of LINE1 transcripts #EMBLOmics
November 20, 2024 at 2:50 PM
beautiful talk by @jjachowicz.bsky.social sharing new insights on molecular function of LINE1 transcripts #EMBLOmics
This was a great talk at #EMBLomics by @molinalab.bsky.social
Hey, this place is getting fun! Here is a new version of our latest preprint on oscillatory dynamics of mRNA metabolism and chromatin accessibility during the cell cycle: www.biorxiv.org/content/10.1...
Single-cell multiomics reveals the oscillatory dynamics of mRNA metabolism and chromatin accessibility during the cell cycle
The cell cycle is a tightly regulated process that requires precise temporal expression of hundreds of cell cycledependent genes. However, the genome-wide dynamics of mRNA metabolism throughout the ce...
www.biorxiv.org
November 22, 2024 at 11:50 AM
This was a great talk at #EMBLomics by @molinalab.bsky.social
First day at #EMBLomics was a blast. Outstanding science and insightful panel. All star panel led by amazing Lacra Bintu!
November 19, 2024 at 9:25 PM
First day at #EMBLomics was a blast. Outstanding science and insightful panel. All star panel led by amazing Lacra Bintu!
November 21, 2024 at 1:44 PM
A throwback to last month's 'Quantitative biology to molecular mechanisms' conference – time to introduce the poster prize winners! #EMBLOmics
A round of applause for:
🏅 Max Trauernicht
🏅 @ingridpelaez.bsky.social
🏅 Honorine Destain
🏅 Óscar García Blay
Read on 👉🏻 s.embl.org/omx24-01-blog
@embl.org
A round of applause for:
🏅 Max Trauernicht
🏅 @ingridpelaez.bsky.social
🏅 Honorine Destain
🏅 Óscar García Blay
Read on 👉🏻 s.embl.org/omx24-01-blog
@embl.org
December 19, 2024 at 2:22 PM
A throwback to last month's 'Quantitative biology to molecular mechanisms' conference – time to introduce the poster prize winners! #EMBLOmics
A round of applause for:
🏅 Max Trauernicht
🏅 @ingridpelaez.bsky.social
🏅 Honorine Destain
🏅 Óscar García Blay
Read on 👉🏻 s.embl.org/omx24-01-blog
@embl.org
A round of applause for:
🏅 Max Trauernicht
🏅 @ingridpelaez.bsky.social
🏅 Honorine Destain
🏅 Óscar García Blay
Read on 👉🏻 s.embl.org/omx24-01-blog
@embl.org
Nacho Molina reveals beautiful cyclic gene expression patterns in scRNA/ATAC data
@molinalab.bsky.social #EMBLOmics
@molinalab.bsky.social #EMBLOmics
a cartoon of homer simpson falling on his back
ALT: a cartoon of homer simpson falling on his back
media.tenor.com
November 22, 2024 at 10:31 AM
Nacho Molina reveals beautiful cyclic gene expression patterns in scRNA/ATAC data
@molinalab.bsky.social #EMBLOmics
@molinalab.bsky.social #EMBLOmics
I attended the ‘Quantitative Biology to Molecular Mechanisms’ conference at EMBL Heidelberg last week and had the incredible honor of winning one of the Poster Prizes! 🏆
A big thanks to the organizers and all the amazing speakers who shared their inspiring research with us. ✨
#EMBLOmics
A big thanks to the organizers and all the amazing speakers who shared their inspiring research with us. ✨
#EMBLOmics
November 27, 2024 at 9:26 AM
I attended the ‘Quantitative Biology to Molecular Mechanisms’ conference at EMBL Heidelberg last week and had the incredible honor of winning one of the Poster Prizes! 🏆
A big thanks to the organizers and all the amazing speakers who shared their inspiring research with us. ✨
#EMBLOmics
A big thanks to the organizers and all the amazing speakers who shared their inspiring research with us. ✨
#EMBLOmics
Always nice to share the ideas together! Many THX to who show interest and ideas in our project 🙏 If interested in TF target search, feel free to contact us 📧 @beatfierz.bsky.social @davidsuter.bsky.social
THX to the EMBL travel grant for me to attend such great conference #EMBLOmics
THX to the EMBL travel grant for me to attend such great conference #EMBLOmics
November 23, 2024 at 12:22 PM
Always nice to share the ideas together! Many THX to who show interest and ideas in our project 🙏 If interested in TF target search, feel free to contact us 📧 @beatfierz.bsky.social @davidsuter.bsky.social
THX to the EMBL travel grant for me to attend such great conference #EMBLOmics
THX to the EMBL travel grant for me to attend such great conference #EMBLOmics
Last talk at #EMBLOmics by Nicolai Slavov spanning alternative proteoforms, single cell proteomics technology and emerging insights @slavov-n.bsky.social
November 22, 2024 at 10:59 AM
Last talk at #EMBLOmics by Nicolai Slavov spanning alternative proteoforms, single cell proteomics technology and emerging insights @slavov-n.bsky.social
Power of proximity tagging by @gingraslab.bsky.social #EMBLOmics
two men are standing next to each other in a parking lot .
ALT: two men are standing next to each other in a parking lot .
media.tenor.com
November 21, 2024 at 11:34 AM
Power of proximity tagging by @gingraslab.bsky.social #EMBLOmics
Day 3 of #EMBLOmics starts with a firework of in situ transcriptome and epigenome methods, brain atlases and image-based perturbation-screening by Xiaowei Zhuang
3️⃣5️⃣ Xiaowei Zhuang (1972- ) 🇨🇳 #womeninSTEM Professor of chemistry and chemical biology. A pioneer in the development of super-resolution microscopes, she developed one of the most widely used methods — stochastic optical reconstruction microscopy, or STORM
vilcek.org/prizes/prize...
vilcek.org/prizes/prize...
November 21, 2024 at 8:26 AM
Day 3 of #EMBLOmics starts with a firework of in situ transcriptome and epigenome methods, brain atlases and image-based perturbation-screening by Xiaowei Zhuang
Luca Giorgetti and Gergely Tihanyi beautiful systematic large scale study on artificial promoter-enhancer-CTCF regulatory landscapes
#EMBLOmics
#EMBLOmics
November 20, 2024 at 1:29 PM
Luca Giorgetti and Gergely Tihanyi beautiful systematic large scale study on artificial promoter-enhancer-CTCF regulatory landscapes
#EMBLOmics
#EMBLOmics
Christine Moene from Bas van Steensel lab shows investigation of Sox2 regulation using Promoter-hopping with a sleaping-beauty transposon. @nkinl.bsky.social
#EMBLOmics
#EMBLOmics
homer simpson is running with his mouth open
ALT: homer simpson is running with his mouth open
media.tenor.com
November 20, 2024 at 2:13 PM
Christine Moene from Bas van Steensel lab shows investigation of Sox2 regulation using Promoter-hopping with a sleaping-beauty transposon. @nkinl.bsky.social
#EMBLOmics
#EMBLOmics
Kasit Chatsirisupachai from @arnaudkr.bsky.social suggests low occupancy and high rate of RNAPol turnover at active promoters uding single molecule footprinting
www.biorxiv.org/content/10.1...
#EMBLOmics
www.biorxiv.org/content/10.1...
#EMBLOmics
www.biorxiv.org
November 21, 2024 at 8:53 AM
Kasit Chatsirisupachai from @arnaudkr.bsky.social suggests low occupancy and high rate of RNAPol turnover at active promoters uding single molecule footprinting
www.biorxiv.org/content/10.1...
#EMBLOmics
www.biorxiv.org/content/10.1...
#EMBLOmics
Congrats Julia Schaepe and colleagues on Greenleaf lab on offsite coming out right in time for today at #EMBLOmics
www.nature.com/articles/s41...
www.nature.com/articles/s41...
Single-molecule states link transcription factor binding to gene expression - Nature
A study uses single-molecule footprinting to measure protein occupancy at regulatory elements on individual molecules in human cells and describes how different properties of transcription factor bind...
www.nature.com
November 21, 2024 at 11:22 AM
Congrats Julia Schaepe and colleagues on Greenleaf lab on offsite coming out right in time for today at #EMBLOmics
www.nature.com/articles/s41...
www.nature.com/articles/s41...
Richard Cardoso da Silva from Tuncay Baubec's lab developed eCR for gH2A.X, identifying new players of DNA repair on chromatin. Looking foward to reading more here:
www.biorxiv.org/content/10.1...
#EMBLOmics
www.biorxiv.org/content/10.1...
#EMBLOmics
| bioRxiv
bioRxiv - the preprint server for biology, operated by Cold Spring Harbor Laboratory, a research and educational institution
www.biorxiv.org
November 20, 2024 at 2:01 PM
Richard Cardoso da Silva from Tuncay Baubec's lab developed eCR for gH2A.X, identifying new players of DNA repair on chromatin. Looking foward to reading more here:
www.biorxiv.org/content/10.1...
#EMBLOmics
www.biorxiv.org/content/10.1...
#EMBLOmics
@danielibrahim.bsky.social shuffles around enhancer elements, and suprisingly nothing - rien - nix - ingenting -nada happens #EMBLOmics
two men sit at a table playing a game of cards with a pile of cards on it
ALT: two men sit at a table playing a game of cards with a pile of cards on it
media.tenor.com
November 20, 2024 at 8:56 AM
@danielibrahim.bsky.social shuffles around enhancer elements, and suprisingly nothing - rien - nix - ingenting -nada happens #EMBLOmics
@tinekelenstra.bsky.social imaging single TF molecules and transcription output together in real time #EMBLOmics
November 20, 2024 at 11:13 AM
@tinekelenstra.bsky.social imaging single TF molecules and transcription output together in real time #EMBLOmics
No cell left behind in Mike's single cell developmental timing study in thousands of zebrafish embryos
@mwdorr.bsky.social
#EMBLOmics
@mwdorr.bsky.social
#EMBLOmics
November 21, 2024 at 2:15 PM
No cell left behind in Mike's single cell developmental timing study in thousands of zebrafish embryos
@mwdorr.bsky.social
#EMBLOmics
@mwdorr.bsky.social
#EMBLOmics
Highly multiplexed RNA binding protein mapping experiment using split-and-pool barcoding by Marko Jovanovic
#EMBLOmics
#EMBLOmics
November 20, 2024 at 11:01 AM
Highly multiplexed RNA binding protein mapping experiment using split-and-pool barcoding by Marko Jovanovic
#EMBLOmics
#EMBLOmics