#FeNNix-Bio1
#compchem FeNNix-Bio1 is accurate and systematically improvable. #compchemsky #biosky #machinelearning
doi.org/10.26434/che...
@erc.europa.eu (project EMC2), @gencifrance.bsky.social Argonne Nat. Laboratory (Incite)
May 6, 2025 at 7:45 AM
#compchem #compbio New preprint: "𝐀𝐜𝐜𝐞𝐥𝐞𝐫𝐚𝐭𝐢𝐧𝐠 𝐌𝐨𝐥𝐞𝐜𝐮𝐥𝐚𝐫 𝐃𝐲𝐧𝐚𝐦𝐢𝐜𝐬 𝐒𝐢𝐦𝐮𝐥𝐚𝐭𝐢𝐨𝐧𝐬 𝐰𝐢𝐭𝐡 𝐅𝐨𝐮𝐧𝐝𝐚𝐭𝐢𝐨𝐧 𝐍𝐞𝐮𝐫𝐚𝐥 𝐍𝐞𝐭𝐰𝐨𝐫𝐤 𝐌𝐨𝐝𝐞𝐥𝐬 𝐮𝐬𝐢𝐧𝐠 𝐌𝐮𝐥𝐭𝐢𝐩𝐥𝐞 𝐓𝐢𝐦𝐞-𝐒𝐭𝐞𝐩 𝐚𝐧𝐝 𝐃𝐢𝐬𝐭𝐢𝐥𝐥𝐚𝐭𝐢𝐨𝐧" in link with our #FeNNix-Bio1 foundation #machinelearning model.

👉 Check it out: arxiv.org/abs/2510.06562
October 9, 2025 at 1:17 PM
#compchem #machinelearning If you want to know more about #FeNNix-Bio1, the first foundation model able to perform accurate - long timescale- condensed phase molecular simulations of biological systems at quantum accuracy, join me in incoming live presentations:
www.linkedin.com/feed/update/...
#fennix #machinelearning #gtc25 #cecam #watoc #vivatech #ai #docking #gpu… | Jean-Philip Piquemal
If you want to know more about #FeNNix-Bio1, the first #machinelearning foundation model able to perform accurate - long timescale- condensed phase molecular simulations of biological systems at quant...
www.linkedin.com
June 7, 2025 at 11:52 AM
#hpc #supercomputing #machinelearning #compchem
New Grand Challenges @gencifrance.bsky.social report dedicated to the Jean Zay 4 machine at IDRIS. Our work on the FeNNix-Bio1 machine learning foundation model can be found on pages 22-25.
genci.fr/sites/defaul...
December 28, 2025 at 7:51 AM
On my way to the 2026 International Society of Quantum Biology and Pharmacology (ISQBP) President's meeting in Cluj, Romania to present our latest results on the #FeNNix-Bio1 foundation #machinelearning model. #compchem #compbio
isqbp2026.com
2026 ISQBP President’s Meeting
breaking barriers with the computational microscope
isqbp2026.com
June 14, 2026 at 12:10 PM
Intéressé par le modèle de fondation FeNNix-Bio1 dédié au drug design (preprint: doi.org/10.26434/che...)? J'en ferai une 1ère présentation publique lors de la 3ème édition de la Journée Deep Learning pour la Science (jdls-2025.sciencesconf.org). #deeplearning #machinelearning #compchem #drugdesign
May 25, 2025 at 6:18 AM
Qubit Pharmaceuticals Launches FeNNix-Bio1: Quantum-Level Foundation Model for Molecular Simulation
#Quantum #QuantumComputing
Qubit Pharmaceuticals Launches FeNNix-Bio1: Quantum-Level Foundation Model for Molecular Simulation - Quantum Computing Report
Qubit Pharmaceuticals has unveiled FeNNix-Bio1, a quantum AI foundation model developed to transform molecular simulations across biomolecular and pharmaceutical research. Trained entirely on syntheti...
quantumcomputingreport.com
May 21, 2025 at 9:12 PM
#compchem The FeNNix-Bio1 foundation model's inference is fast and leverages multi-GPUs computing systems (here
NVIDIA 's H100 nodes). It is also designed so learning a new model remains economical (1 card /node) & can be performed in 48 hours. #machinelearning
doi.org/10.26434/che...
May 7, 2025 at 5:26 AM
#compchem FeNNix-Bio1 can accuratly model: water properties, ions in solution, small molecules hydration free energies, complex folding free-energy landscapes, large-scale protein dynamics, protein-ligand binding, chemical reactions & can be coupled to protein structure prediction models (Boltz-1)
May 6, 2025 at 10:31 AM
#compchem New preprint: "A Foundation Model for Accurate Atomistic Simulations in Drug Design"

FeNNix-Bio1, a foundation #machinelearning model for biosimulations

doi.org/10.26434/che...
#compchemsky #biosky

Great work by T. Plé & the teams @lct-umr7616.bsky.social & @qubit-pharma.bsky.social
A Foundation Model for Accurate Atomistic Simulations in Drug Design
Neural network potentials now offer robust alternatives to electronic structure and empirical force fields computations for the on-the-fly production of the potential energy surfaces required in atomi...
doi.org
May 6, 2025 at 7:35 AM
🤩 New year, new publication using the FeNNix-Bio1 foundation model !

🚀« Accelerating Molecular Dynamics Simulations with Foundation Neural Network Models using Multiple Time-Step and Distillation» published in the Journal of Physical Chemistry Letters
#compchemsky #biosky #machinelearning
#compchem #machinelearning
1st of the year in J. Phys. Chem. Lett.: "Accelerating Molecular Dynamics Simulations with Foundation Neural Network Models using Multiple Time-Step and Distillation". pubs.acs.org/doi/full/10....
(see also the updated preprint: arxiv.org/abs/2510.06562)
Accelerating Molecular Dynamics Simulations with Foundation Neural Network Models Using Multiple Time Steps and Distillation
We present a distilled multi-time-step (DMTS) strategy to accelerate molecular dynamics simulations using foundation neural network models. DMTS uses a dual-level neural network, where the target accurate potential is coupled to a simpler but faster model obtained via a distillation process. The 3.5 Å cutoff distilled model is sufficient to capture the fast-varying forces, i.e., mainly bonded interactions, from the accurate potential, allowing its use in a reversible reference system propagator algorithm (RESPA)-like formalism. The approach conserves accuracy, preserving both static and dynamic properties, while enabling us to evaluate the costly model only every 3 to 6 fs depending on the system. Consequently, large simulation speedups over standard 1 fs integration are observed: nearly 4-fold in homogeneous systems and 3-fold in large solvated proteins through leveraging active learning for enhanced stability. Such a strategy is applicable to any neural network potential and reduces the performance gap with classical force fields.
pubs.acs.org
January 24, 2026 at 6:39 AM
I heard in some talks at #Watoc 2025 that #machinelearning Foundation models could not simulate well condensed-phase systems in Biology & Chemistry. Have a look at our recent papers! Lots of things are now possible with the #FENNIX-Bio1 model (check the post below). #compchem #drugdesign #GPU
June 24, 2025 at 1:24 PM
Glad to have presented our #FeNNix-Bio1 foundation #machinelearning model at the 2026 #Quitel in Coimbra, Portugal.
A big thank to Sérgio Filipe Sousa for the invitation and the organization!

Sorbonne Université / CNRS
#compchem #drugdesign
www.quitel2026.com
July 10, 2026 at 9:32 AM
3/3: Bridging the gap between accurate QC & condensed-phase MD, we leveraged transfer learning to improve the DFT-based FeNNix-Bio1 model. We coupled it to path integrals adaptive sampling quantum dynamics to perform ns reactive simulations to study the PH transition (7 to 5) of a 1M-atom STMV model
May 9, 2025 at 6:29 AM
FeNNix-Bio1 by Qubit Pharmaceuticals &
@sorbonne-universite.fr
delivers quantum-level accuracy in molecular simulations—fast, scalable & efficient.

Read more on how it's changing the game 👉 blog.qubit-pharmaceuticals.com/blog/ai-is-r...
AI and Quantum Chemistry: Powering the Next Leap in Drug Design
Qubit Pharmaceuticals accelerates and transforms drug discovery by publishing an unprecedentedly accurate computational approach combining their core technologies with exciting innovations: highest ac...
blog.qubit-pharmaceuticals.com
May 7, 2025 at 1:25 PM
FeNNix-Bio1 - neural network potential for small to large models.
#compchem FeNNix-Bio1 can accuratly model: water properties, ions in solution, small molecules hydration free energies, complex folding free-energy landscapes, large-scale protein dynamics, protein-ligand binding, chemical reactions & can be coupled to protein structure prediction models (Boltz-1)
#compchem New preprint: "A Foundation Model for Accurate Atomistic Simulations in Drug Design"

FeNNix-Bio1, a foundation #machinelearning model for biosimulations

doi.org/10.26434/che...
#compchemsky #biosky

Great work by T. Plé & the teams @lct-umr7616.bsky.social & @qubit-pharma.bsky.social
May 6, 2025 at 11:25 AM
In the case of FeNNix-Bio1, we directly simulate the dynamics of the protein with an all-atom ML potential with near ab initio accuracy.
December 17, 2025 at 4:31 PM
OpenMM-ML 1.6 has been released! It supports a much wider range of models (including MACE-OMOL-0, FeNNix-Bio1, and Orb-v3). You can also use OpenMM with any package that supports the ASE (Atomic Simulation Environment) Calculator interface. "pip install openmmml". github.com/openmm/openm...
GitHub - openmm/openmm-ml: High level API for using machine learning models in OpenMM simulations
High level API for using machine learning models in OpenMM simulations - openmm/openmm-ml
github.com
March 31, 2026 at 10:43 PM
💊 La start-up @qubit-pharma.bsky.social et Sorbonne Université dévoilent FeNNix-Bio1, une IA révolutionnaire pour la découverte de médicaments : swll.to/b4k92qy

@lesechosfr.bsky.social
May 20, 2025 at 1:38 PM