#GenomeAssembly
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mmontonerin.bsky.social
My favourite play to watch in the theatre 🙌🏽🧬🤩 #evomics2025 #bioinformatics #genomeassembly #genomics
evomics.bsky.social Workshops @evomics.bsky.social · Jan 9
We start a new day of the Workshop on Genomics 2025 with the lecture on Genome Assembly by @camillemrcht.bsky.social and @npmalfoy.bsky.social! They always have a way to make the theory behind genome assembly enterntaining and exciting! 🤩 #evomics2025 #bioinformatics #genomics
January 9, 2025 at 8:54 AM
jsantoyo.bsky.social
ChromoMapper: a new tool to quickly compare large genome assemblies. #GenomeAssembly #GenomeComparison #Bioinformatics #Genomics @bioinfoadv.bsky.social 🧪🧬 🖥️
academic.oup.com/bioinformati...
January 17, 2026 at 11:49 AM
jsantoyo.bsky.social
Unlocking the full potential of Oxford Nanopore reads with NOVOLoci. #Nanopore #Sequencing #GenomeAssembly #HaplotypeAwareAssembler @nanoporetech.com @biorxiv-bioinfo.bsky.social 🧬 🖥️
www.biorxiv.org/content/10.1...
August 16, 2025 at 6:05 PM
bffo.bsky.social
I also updated the Tailless tenrec (Tenrec ecaudatus) #Wikipedia page | #Education #OpenScience #CitationLink #GenomeAssembly | 🧬 🖥️ 🧪 🔓
⬇️
en.wikipedia.org/wiki/Tailles...
Tailless tenrec - Wikipedia
en.wikipedia.org
April 19, 2026 at 5:53 PM
evomics.bsky.social
Antoine (@npmalfoy.bsky.social), with the pink cap, plays the role of a computer scientist, trying to come up with the possible algorithms to efficiently overlap the sequencing reads. #genomeassembly 🧢🧬
January 9, 2025 at 8:40 AM
physaliacourses.bsky.social
🚨Registrations are now open for the course on Genome assembly using @pacbio.bsky.social and Hi-C with @marcelauliano.bsky.social & @ferreiranunesjoao.bsky.social In Nov

For more info: www.physalia-courses.org/courses-work...

#GenomeAssembly #LongReads
Eukaryotic genome assembly using Pacbio and Hi-C
Dates 9-13 November 2026 To foster international participation, this course will be held online
www.physalia-courses.org
June 11, 2026 at 4:26 PM
jsantoyo.bsky.social
Autocycler: long-read consensus assembly for bacterial genomes. #LongRead #SequneceData #GenomeAssembly #ConsensusAssembly #BacterialGenomes #Bioinformatics 🧬 🖥️
academic.oup.com/bioinformati...
September 21, 2025 at 6:05 PM
jsantoyo.bsky.social
Pangenome-guided sequence assembly via binary optimisation. #GenomeAssembly #PangenomeGuiedeAssembly @biorxiv-genomic.bsky.social
www.biorxiv.org/content/10.1...
August 18, 2025 at 1:49 PM
jsantoyo.bsky.social
Mapler: A pipeline for assessing assembly quality in taxonomically rich metagenomes sequenced with HiFi reads. #Metagenomics #HiFi #LongReads #Sequencing #GenomeAssembly #Bioinformatics 🧬 🖥️
academic.oup.com/bioinformati...
June 11, 2025 at 9:15 AM
nancy-choudhary.bsky.social
If you're new to plant genomics research, don't miss the supplementary hands-on manual we included - it walks you through the major data analysis steps in a typical plant genomics project! ☘️ 🧬

#PlantScience #GenomeAssembly #OpenScience
bpucker.bsky.social Boas Pucker @bpucker.bsky.social · Sep 16
🚀 Exciting update: "Cookbook for Plant Genome Sequences" now includes an updated overview figure! 🌱🔬
Check out how to run a plant genome sequencing project:
www.preprints.org/manuscript/2...
#Genomics #LongReads #Bioinformatics
@puckerlab.bsky.social
Overview figure of our plant genome sequencing workflow. Details and reference: https://www.preprints.org/manuscript/202508.1176/v2
September 16, 2025 at 1:52 PM
jsantoyo.bsky.social
Complete Genome Assembly of Japonica Rice Variety Zhonghua 11. #RiceGenome #T2T #GenomeAssembly @mplantpcom.bsky.social 🧬 🖥️ 🧪
www.cell.com/plant-commun...
August 9, 2025 at 10:49 AM
ebpgenome.bsky.social
(1/2) 🍄 The ends of chromosomes—called telomeres—are notoriously hard to sequence 🧬 But they can hide novel genes and important structural information. Cracking them open could reveal what’s been missing.
👉More insights here: bit.ly/44rgW94

#Genomics #Telomeres #GenomeAssembly #foodsecurity #T2T
June 27, 2025 at 3:35 PM
physaliacourses.bsky.social
Interested in #GenomeAssembly & #GenomeAnnotation?
Join our March course to learn how to create high-quality, haplotype-phased genomes using Illumina, @pacbio.bsky.social @nanoporetech.com & more.

www.physalia-courses.org/courses-work...
#Genomics #Bioinformatics @vertebrategenomes.bsky.social
January 28, 2026 at 1:11 PM
jsantoyo.bsky.social
A telomere-to-telomere genome assembly of koi carp (Cyprinus carpio) using long reads and Hi-C technology. #T2T #KoiCarpGenome #GenomeAssembly #LongReads #HiC @gigascience.bsky.social
academic.oup.com/gigascience/...
August 31, 2025 at 6:05 PM
jsantoyo.bsky.social
Approaching an Error-Free Diploid Human Genome. #HumanGenome #ReferenceGenome #HanChinesePopulation #ErrorCorrection #GenomeAssembly @biorxiv-bioinfo.bsky.social 🧬
www.biorxiv.org/content/10.1...
August 3, 2025 at 2:01 PM
jsantoyo.bsky.social
The telomere-to-telomere chromosome-scale genome assembly of Acremonium chrysogenum. #FungalGenome #T2T #GenomeAssembly #ScientificData
www.nature.com/articles/s41...
August 16, 2025 at 9:15 AM
jsantoyo.bsky.social
MoGAAAP: A modular Snakemake workflow for automated genome assembly and annotation with quality assessment. #GenomeAssembly #GenomeAnnotation #GenomeQuality #Genomics #Bioinformatics @biorxiv-bioinfo.bsky.social 🧬 🖥️
www.biorxiv.org/content/10.1...
September 8, 2025 at 5:05 PM
tahirali-biomics.bsky.social
𝗔𝗜 𝗶𝘀 𝗯𝗲𝗰𝗼𝗺𝗶𝗻𝗴 𝗮𝗻 𝗶𝗻𝘁𝗲𝗿𝗲𝘀𝘁𝗶𝗻𝗴 𝗰𝗼𝗹𝗹𝗮𝗯𝗼𝗿𝗮𝘁𝗼𝗿 — 𝗮𝘀 𝗹𝗼𝗻𝗴 𝗮𝘀 𝗶𝘁 𝘀𝘁𝗮𝘆𝘀 𝗮 𝗰𝗼𝗹𝗹𝗮𝗯𝗼𝗿𝗮𝘁𝗼𝗿 𝗿𝗮𝘁𝗵𝗲𝗿 𝘁𝗵𝗮𝗻 𝗮 𝘀𝘂𝗽𝗲𝗿𝘃𝗶𝘀𝗼𝗿, 𝘄𝗶𝘁𝗵 𝗵𝘂𝗺𝗮𝗻𝘀 𝘀𝘁𝗶𝗹𝗹 𝗹𝗲𝗮𝗱𝗶𝗻𝗴 𝘁𝗵𝗲 𝘁𝗵𝗶𝗻𝗸𝗶𝗻𝗴, 𝗰𝗿𝗲𝗮𝘁𝗶𝘃𝗶𝘁𝘆, 𝗮𝗻𝗱 𝗱𝗶𝗿𝗲𝗰𝘁𝗶𝗼𝗻
#genomics #bioinformatics #populationgenetics #aiart #Arabidopsis #GenomeAssembly #ComputationalBiology #sciencecommunication
May 26, 2026 at 9:34 PM
botsocamerica.bsky.social
First chromosome-scale reference #GenomeAssembly for Pectocarya recurvata, a #SonoranDesert annual & important eco-evolutionary model

In #AppsPlantSci by @poppybot.bsky.social, Pelosi, Venable & Dlugosch

bsapubs.onlinelibrary.wiley.com/doi/full/10.... @uofa-eeb.bsky.social #Boraginaceae #botany
Image of a tiny plant (Pectocarya recurvata) growing with multiple fruits and a flower. The photographer's fingers are included for scale to illustrate that the plant is only about two inches tall.
May 23, 2025 at 5:14 PM
projectpsyche.bsky.social
🧬 New genome drop!
The Sanger team just completed the #Acontia_lucida genome assembly — ilAcoLuci2.1 is here!
Built with PacBio + Hi-C, the assembly includes two curated haplotypes.

#GenomeOfTheWeek #Acontialucida #Genomics #ProjectPsyche #GenomeAssembly

lepiforum.org/wiki/page/Ac...
Acontia lucida - LepiWiki
lepiforum.org
May 21, 2025 at 1:23 PM
canadianbiogenome.bsky.social
The Muskox genome was sequenced and assembled by CGEn’s Toronto node, as reported by Lok et al., (2024).
Read the publication here: tinyurl.com/muskox-nature

#Muskox #Genomics
#GenomeAssembly #Biodiversity #OpenScience
April 22, 2026 at 5:15 PM
ergabiodiv.bsky.social
#ERGAReads | MicroFinder: conserved gene-set mapping and assembly ordering for manual curation of bird dot microchromosomes 🐤🧩 academic.oup.com/gigascience/... #genomes #genomeassembly #curation #birds #bioinformatics
@tom-mathers.bsky.social @sangerinstitute.bsky.social
MicroFinder: conserved gene-set mapping and assembly ordering for manual curation of bird dot microchromosomes
AbstractBackground. Obtaining chromosomally complete genome assemblies across the tree of life is an important goal of biodiversity genomics. However, some
academic.oup.com
September 9, 2026 at 7:30 AM
bffo.bsky.social
From @nature.com ’s #ScientificData | Chromosome-level #GenomeAssembly of the common #tenrec, Tenrec ecaudatus (Schreber, 1778), a new model for early placental mammal evolution | #Genomics #Bioinformatics | 🧬 🖥️ 🧪 🔓
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link.springer.com/article/10.1...
Chromosome-level genome assembly of the common tenrec, Tenrec ecaudatus (Schreber, 1778), a new model for early placental mammal evolution - BMC Genomics
BMC Genomics - Our understanding of many biological aspects of early placental mammals is still very limited. Due to the paucity of the fossil record, attention is often turned to those extant...
link.springer.com
April 19, 2026 at 5:51 PM
novogene-europe.bsky.social
See how Novogene used long-read sequencing & hybrid assembly to build high-quality reference genomes in polyploid & large plant species (e.g. chrysanthemum, Torreya). Learn methods & breakthroughs. #PlantGenomics #LongRead #GenomeAssembly https://tinyurl.com/3yzjaef6
May 21, 2026 at 7:05 AM
ebpgenome.bsky.social
🐦🧬 What does it take to complete the genome of a songbird?

The Vertebrate Genomes Project has produced the first complete, fully phased reference genome of the zebra finch (𝘛𝘢𝘦𝘯𝘪𝘰𝘱𝘺𝘨𝘪𝘢 𝘨𝘶𝘵𝘵𝘢𝘵𝘢).

Getting there took more than simply generating more sequence.

#T2T #VGP #Genomics #GenomeAssembly
A male zebra finch with a bright red-orange beak, orange cheek patch, striped chest, and spotted brown wings. Text asks, “What does it take to complete the genome of a songbird?” and explains that the Vertebrate Genomes Project produced the first truly complete, fully diploid, fully phased reference genome of the zebra finch (Taeniopygia guttata). A male zebra finch standing on rocky ground. Text explains that bird genomes are relatively small, but some of their tiniest chromosomes are difficult to sequence. The complete zebra finch genome revealed 7 macrochromosomes, 21 microchromosomes, and 11 tiny dot chromosomes.
September 2, 2026 at 4:22 PM