#JHPCE
A colleague Geo @geopertea.bsky.social found out a cool trick to get Positron working with full support at our computing cluster JHPCE (remote file explorer, Positron assistant seeing the remote R session). Game changer for my work at LIBD! Check out his demo video (youtu.be/CnmaJG8VPp8) #positron
January 27, 2026 at 7:53 PM
Check out my LIBD @lieberinstitute.bsky.social R Stats Club #rstats presentation on SLURM array jobs for efficient parallel data analysis on HPC systems--

#slurm #hpc

youtu.be/Sz7LpAC1gsQ
[2025-04-04] Writing nested array jobs at JHPCE and designing run_all.sh scripts
YouTube video by Leonardo Collado Torres
youtu.be
May 23, 2025 at 2:59 PM
I recently updated one of our first 2020 @libdrstats.bsky.social videos: setting up your macOS computer to work with #JHPCE, #rstats @posit.co, #Cyberduck, and more.

Just what you need for a new 💻, particularly if your @LieberInstitute work laptop 💻 got re-imaged recently

youtu.be/8tuI-ZAlZ1Y
March 20, 2024 at 2:22 AM
Are you a #SLURM & #rstats user? You might want to check out 👀 #slurmjobs 📦 by Nick Eagles

It's inspired by #sgejobs @lcolladotor.bsky.social & allows R users to quickly create #bash scripts for submitting SLURM jobs

💻 github.com/LieberInstit...

youtu.be/pte2qnFonV0
[2023-10-27] Using slurmjobs for interacting with SLURM at JHPCE from R
For more information on Nick Eagles, check https://github.com/Nick-Eagles.For more information about the materials discussed in this video, check https://git...
youtu.be
February 16, 2024 at 10:27 PM
I re-edited this 2020 video using Adobe Premier Pro's features for removing filler words, pauses, and text-based editing. In total it went down from 20:53 min to 12:41. I hope that you get to (re-)enjoy it ^_^.

@jennybryan.bsky.social

#RStats #reprex #reproducibility #JHPCE

youtu.be/LfUFxHFhXTE
[2020-04-03] How to ask for R help by creating a small reproducible example (edited on 2026-01-27)
YouTube video by Leonardo Collado Torres
youtu.be
January 27, 2026 at 5:00 PM
We made our own manual URL referral website in case we need to update Globus collections which completely remakes the URL

Example
github.com/LieberInstit...

So research.libd.org/globus/jhpce... is the URL on papers that currently points to app.globus.org/file-manager... but we can change as needed
globus/index.Rmd at dc83a797dc7484dbcb216544b7705d3d69220894 · LieberInstitute/globus
LIBD Globus Share Endpoints. Contribute to LieberInstitute/globus development by creating an account on GitHub.
github.com
November 21, 2024 at 3:38 AM
#JHPCE has a new documentation website and I updated my recommended

~/.bashrc
~/.slurm/defaults

Check my @libdrstats.bsky.social video 📽️ for more details youtu.be/JQxBrJawUvY

#SLURM #hpc
[2024-04-05] Diving into the new JHPCE documentation website and updating JHPCE SLURM configuration
For more information on Leonardo Collado-Torres, check https://twitter.com/lcolladotor.For more information about the materials discussed in this video, chec...
youtu.be
April 13, 2024 at 6:09 PM
Thanks for #JHPCE user award 😊 & the fun hat 🧢 with LED lights 🚥
@jhubiostat 🫱🏼‍🫲🏾 @LieberInstitute

I'm glad that you find the material we have shared jhpce.jhu.edu/knowledge-ba... useful ^_^

Congrats @kasperdhansen.bsky.social for the 2022 award! conda_R is VERY useful!

youtube.com/playlist?lis...
October 31, 2023 at 8:54 PM
As noted in the acknowledgements, we would like to thank

* the families of the donors
* Lieber and Maltz families who created @LieberInstitute
* Amy Deep-Soboslay, James Tooke, @martinowk.bsky.social from LIBD
* Linda Orzolek
* JHPCE @jhubiostat
March 7, 2024 at 10:45 PM