#PAM50
Check out our latest publication with
@neurovale.bsky.social @jcohenadad.bsky.social
@drkenweber.bsky.social , and Jan Valošek about using nerve rootlet information to register spinal cord images to the PAM50 template👇
New paper in Imaging Neuroscience by Sandrine Bédard, Julien Cohen-Adad, et al:

Rootlets-based registration to the PAM50 spinal cord template

doi.org/10.1162/IMAG...
August 28, 2025 at 2:17 PM
New paper in Imaging Neuroscience by Sandrine Bédard, Julien Cohen-Adad, et al:

Rootlets-based registration to the PAM50 spinal cord template

doi.org/10.1162/IMAG...
August 28, 2025 at 1:59 PM
Drs. Dent and Perou made a compelling case that ER low positive are neither ER+, nor TNBC, though clinically they seem to mirror TNBC more closely. Molecularly, the low positive are (unexpectedly) not more basal-like.

Open question what to do with ER-lowpos, PAM50 luminal vs basal. #SABCS24
December 11, 2024 at 8:38 PM
Proof?
• Improved breast cancer subtyping vs PAM50
• Links to survival + tumor mutational burden
• Free R package + web app for the community
👉 www.karakachlab.org/software/int...
September 21, 2025 at 5:23 PM
A nice poster on TDxD resistance presented by my dear friend Mohamed Gouda from MDACC. Almost 1/3rd of Pts lost HER2 IHC, and another 1/3 decreased transcript.

Did PAM50 change?

#SABCS24
#bcsm
December 11, 2024 at 8:10 PM
Dr Luca Malorni presented very thought provoking TOUCH study in ER/HER2+ with neoadj HP/Taxol vs HP/Palbo Letrozole. pCR 32.9 vs 33.3%. In high RBsig, Palbo/AI did better!

Another no-chemo Rx next to KRISTINE. Qs: PAM50 role? CDK/ET replacing Taxol in NACT? What about CDK in ABC?

#SABCS24
#bcsm
December 11, 2024 at 6:41 PM
Arezoo Borji, et al.: A deep learning pipeline for PAM50 subtype classification using histopathology images and multi-objective patch selection https://arxiv.org/abs/2604.01798 https://arxiv.org/pdf/2604.01798 https://arxiv.org/html/2604.01798
April 3, 2026 at 6:30 AM
A 10-gene signature can now predict recurrence risk for HR+/HER2- early breast cancer #EBC patients post-chemo-endocrine therapy.

@myesmo.bsky.social @breastcancerorg.bsky.social

#Onco404 #Cancer #Kanser #BreastCancer #MemeKanseri #OncotypeDX #MammaPrint #EndoPredict #Prosigna #PAM50 #GGI #MedSky
May 14, 2025 at 7:21 PM
Sandrine B\'edard, Jan Valo\v{s}ek, Valeria Oliva, Kenneth A. Weber II, Julien Cohen-Adad: Rootlets-based registration to the spinal cord PAM50 template https://arxiv.org/abs/2505.00115 https://arxiv.org/pdf/2505.00115 https://arxiv.org/html/2505.00115
May 2, 2025 at 6:01 AM
✅ AUC of 0.73–0.79 (training) and 0.69–0.71 (validation) for 3–7-year predictions.
☑️ Identifies patients needing intensified therapies (e.g., CDK4/6 inhibitor).
✅ Cost-effective via NGS. Outperforms 21-gene, 70-gene, and PAM50 in high-risk stratification.

#Onco404 #BreastCancer #MemeKanseri #MedSky
May 14, 2025 at 7:21 PM
Immunohistochemistry v. Genomic Profiling: Game on for Her2Low. #her2low #genomictesting
Current breast cancer classification methods, particularly immunohistochemistry and PAM50, face challenges in accurately characterizing the HER2-low subtype, ... read more:
www.nature.com/articles/s41...
The Breast Cancer Classifier refines molecular breast cancer classification to delineate the HER2-low subtype - npj Breast Cancer
npj Breast Cancer - The Breast Cancer Classifier refines molecular breast cancer classification to delineate the HER2-low subtype
www.nature.com
February 21, 2025 at 1:41 AM
Real-world second- and third-line progression-free survival after progression on first-line CDK4/6 inhibitors in HR /HER2- metastatic breast cancer by PAM50 intrinsic subtype: the SOLTI-1801 CDK-PREDICT study scientiasalut.gencat.cat/handle/11351... #ScientiaVH
Making sure you're not a bot!
scientiasalut.gencat.cat
August 28, 2026 at 6:55 PM
Applied to a pediatric ventilator-associated pneumonia cohort and TCGA breast cancer data, the flag mean outperformed competing methods in cluster accuracy and identified prognostically relevant subgroups beyond PAM50 subtypes.
August 12, 2026 at 5:00 PM
When checking for clinicopathological and molecular factors predicting pathologic response, we found that PAM50 non-luminal subtypes at baseline were the only independent predictors of response to NACT, while for NET MMP11 mRNA levels were independently associated with RCB-II/III
November 28, 2024 at 7:11 AM
7/
Models without actions are useless.

"This subtype has worse survival" - so what? What drug? What treatment?
PAM50 breast cancer classifier was useless until ProSigna turned it into a score recommending chemotherapy.
January 21, 2026 at 2:15 PM
Real-world second- and third-line progression-free survival after progression on first-line CDK4/6 inhibitors in HR+/HER2- metastatic breast cancer by PAM50 intrinsic subtype: the SOLTI-1801 CDK-PREDICT study link.springer.com/article/10.1... #hvhebron #onco [Text complet]
March 12, 2026 at 10:27 AM
Palbociclib, trastuzumab and endocrine therapy in pretreated HER2-positive and PAM50 luminal advanced breast cancer: randomised phase II, SOLTI-1303 PATRICIA trial aacrjournals.org/clincancerre... #hvhebron #onco
Palbociclib, trastuzumab and endocrine therapy in pretreated HER2-positive and PAM50 luminal advanced breast cancer: randomised phase II, SOLTI-1303 PATRICIA trial
Abstract. Purpose: Based on the results from SOLTI-PATRICIA trial (NCT02448420) cohorts A/B, a direct comparison with standard-of-care treatments is needed to evaluate the efficacy and safety of palbo...
aacrjournals.org
December 5, 2025 at 12:32 PM
311P PFS2 and 3 after first-line CDK4/6i in HR+/HER2- metastatic breast cancer patients based on PAM50 intrinsic subtype and treatment strategies within the SOLTI-1801 CDK-PREDICT study www.sciencedirect.com/science/arti... #hvhebron #onco [Text complet]
311P PFS2 and 3 after first-line CDK4/6i in HR+/HER2- metastatic breast cancer patients based on PAM50 intrinsic subtype and treatment strategies within the SOLTI-1801 CDK-PREDICT study
www.sciencedirect.com
May 21, 2025 at 9:57 AM
🎯 El perfil molecular podría ayudarnos a optimizar la secuencia terapéutica tras CDK4/6 en práctica clínica real.

Lo revelan los resultados del estudio SOLTI-1801 CDK-PREDICT, publicados en la revista Breast Cancer Research and Treatment: link.springer.com/article/10.1...

#CDKPREDICT
Real-world second- and third-line progression-free survival after progression on first-line CDK4/6 inhibitors in HR+/HER2- metastatic breast cancer by PAM50 intrinsic subtype: the SOLTI-1801 CDK-PREDI...
Purpose Estrogen receptor-positive (ER+), HER2-negative (HER2-) metastatic breast cancer (MBC) shows variable outcomes after first-line CDK4/6 inhibitors (CDK4/6i) plus endocrine therapy (ET). The pro...
link.springer.com
March 4, 2026 at 7:29 PM
Feed: "Inside Precision Medicine"
By: Laura Cowen on Wednesday, October 8, 2025
Prostate Cancer Biomarker Test First to Predict Hormone Therapy Response
PAM50 gene expression test identifies which recurrent prostate cancer patients benefit most from hormone therapy with apalutamide.
www.insideprecisionmedicine.com
October 9, 2025 at 12:15 AM
Cómo una prueba genómica puede brindar tratamientos más eficaces ante el cáncer de próstata
Cómo una prueba genómica puede brindar tratamientos más eficaces ante el cáncer de próstata
El análisis denominado PAM50 permitiría a los especialistas identificar perfiles individuales y ajustar las estrategias terapéuticas. Cómo este avance podría modificar el futuro de la terapia personalizada, según expertos consultados por National Geographic
dlvr.it
January 26, 2026 at 5:50 PM
Aneuploidy selects for the acquisition of driver genes in breast cancer
a, A specificity score for each autosomal arm-level copy number gain or loss was calculated for each PAM50 subtype from the TCGA data (top) and each IntCluster from the METABRIC data (bottom) and plotted against the proportion of patients containing that specific arm-level alteration. The specificity score was defined as the proportion of genes on a given chromosome arm, whose percentage of alteration was greater than 1.645 standard deviations above the mean of all subtypes, such that a score of 1 indicates that each gene on a given arm is significantly gained or lost relative to all other subtypes. Arm-level amplifications are shown in red and arm-level losses in blue and selected chromosome arms are labelled. b, Chromosome arm-level alterations were ranked by the product of their specificity score and proportion of basal-like breast cancer patients called by PAM50 subtyping of the TCGA and METABRIC datasets or by IntCluster10 patients from the METABRIC dataset. A higher product represents a greater association for that alteration with basal-like breast cancer relative to the other subtypes and is towards the left of the heatmap. Gains and losses for each arm are indicated in red and blue font above the heatmap, respectively. An inset...
www.nature.com
July 8, 2026 at 9:48 PM