The #RegSys @iscb-regsys.bsky.social track is gonna be outstanding again this year with a great selection of talks and keynotes @verapancaldi.bsky.social, Mafalda Dias, Roser Vento-Tormo, and @lucapinello.bsky.social !
www.iscb.org/ismbeccb2025...
www.iscb.org/ismbeccb2025...
RegSys
ISCB - International Society for Computational Biology
www.iscb.org
July 21, 2025 at 8:02 AM
The #RegSys @iscb-regsys.bsky.social track is gonna be outstanding again this year with a great selection of talks and keynotes @verapancaldi.bsky.social, Mafalda Dias, Roser Vento-Tormo, and @lucapinello.bsky.social !
www.iscb.org/ismbeccb2025...
www.iscb.org/ismbeccb2025...
#RegSys is starting with the keynote from @verapancaldi.bsky.social who talks about the changes of chromatin structure and the epigenome in cancer patients #ismbeccb2025
July 23, 2025 at 10:34 AM
#RegSys is starting with the keynote from @verapancaldi.bsky.social who talks about the changes of chromatin structure and the epigenome in cancer patients #ismbeccb2025
What a fantastic #ISMBECCB2025 conference it has been, with an outstanding #RegSys @iscb-regsys.bsky.social COSI track!
Thanks, everyone, for submitting, attending, presenting, and organizing @iscb.bsky.social @eccb-europe.bsky.social
Thanks, everyone, for submitting, attending, presenting, and organizing @iscb.bsky.social @eccb-europe.bsky.social
July 24, 2025 at 7:00 PM
What a fantastic #ISMBECCB2025 conference it has been, with an outstanding #RegSys @iscb-regsys.bsky.social COSI track!
Thanks, everyone, for submitting, attending, presenting, and organizing @iscb.bsky.social @eccb-europe.bsky.social
Thanks, everyone, for submitting, attending, presenting, and organizing @iscb.bsky.social @eccb-europe.bsky.social
Laura Hinojosa talks about TFs that regulate replication timing
#RegSys #ismbeccb2025 @ferhatay.bsky.social
#RegSys #ismbeccb2025 @ferhatay.bsky.social
July 23, 2025 at 11:56 AM
Laura Hinojosa talks about TFs that regulate replication timing
#RegSys #ismbeccb2025 @ferhatay.bsky.social
#RegSys #ismbeccb2025 @ferhatay.bsky.social
Closing RegSys Day 1 we have Mafalda Días sharing her work on how evolution can be used to understand disease
#ismbeccb2025
#ismbeccb2025
July 23, 2025 at 4:24 PM
Closing RegSys Day 1 we have Mafalda Días sharing her work on how evolution can be used to understand disease
#ismbeccb2025
#ismbeccb2025
Our own Damla @damlaob.bsky.social making a great presentation of the upcoming updates of JASPAR and UniBind with BPnet DL models at #RegSys @iscb-regsys.bsky.social #ISMBECCB2025
Chat with her at her poster D-485.
Chat with her at her poster D-485.
July 23, 2025 at 11:55 AM
Our own Damla @damlaob.bsky.social making a great presentation of the upcoming updates of JASPAR and UniBind with BPnet DL models at #RegSys @iscb-regsys.bsky.social #ISMBECCB2025
Chat with her at her poster D-485.
Chat with her at her poster D-485.
And BIG thanks to #RegSys track organizers @abardet.bsky.social A. Emad J. Welch R. Gordan @xiuweizhang.bsky.social R. Beekman @martamele.bsky.social @anniquec.bsky.social @shaunmahony.bsky.social @ferhatay.bsky.social and co-chairs @alemedinarivera.bsky.social and @themarcelschulz.bsky.social
July 24, 2025 at 7:00 PM
And BIG thanks to #RegSys track organizers @abardet.bsky.social A. Emad J. Welch R. Gordan @xiuweizhang.bsky.social R. Beekman @martamele.bsky.social @anniquec.bsky.social @shaunmahony.bsky.social @ferhatay.bsky.social and co-chairs @alemedinarivera.bsky.social and @themarcelschulz.bsky.social
Excited to present our ongoing work @steglelab.bsky.social @sangerinstitute.bsky.social @bayraktarlab.bsky.social @mhaniffa.bsky.social @teichlab.bsky.social on whole embryo modeling of how TFs interact to drive specific CRE element activation in human organogenesis.
#RegSys
Wed 23 July, 14:40, 11BC
#RegSys
Wed 23 July, 14:40, 11BC
@vitaliikl.bsky.social will discuss how biophysical deep learning improves understanding of embryogenesis. He applied cell2state, his new method leveraging TF-motif interactions and biophysical constraints, on an unpublished multimodal sc and spatial atlas.
#RegSys
📅 July 23 | 🕑 14:40 | 📍 Room 11BC
#RegSys
📅 July 23 | 🕑 14:40 | 📍 Room 11BC
July 20, 2025 at 12:43 PM
Excited to present our ongoing work @steglelab.bsky.social @sangerinstitute.bsky.social @bayraktarlab.bsky.social @mhaniffa.bsky.social @teichlab.bsky.social on whole embryo modeling of how TFs interact to drive specific CRE element activation in human organogenesis.
#RegSys
Wed 23 July, 14:40, 11BC
#RegSys
Wed 23 July, 14:40, 11BC
Next is
@damlaob to talk about putting new Deep learning models of TFs into #Jaspardb #RegSys #ismbeccb2025 @amathelier.bsky.social
@damlaob to talk about putting new Deep learning models of TFs into #Jaspardb #RegSys #ismbeccb2025 @amathelier.bsky.social
July 23, 2025 at 11:50 AM
Next is
@damlaob to talk about putting new Deep learning models of TFs into #Jaspardb #RegSys #ismbeccb2025 @amathelier.bsky.social
@damlaob to talk about putting new Deep learning models of TFs into #Jaspardb #RegSys #ismbeccb2025 @amathelier.bsky.social
Last talk at #regsys today is a keynote by Mafalda Dias about modelling sequence variation in Evolution with insights into diseases #ismbeccb2025
July 23, 2025 at 4:23 PM
Last talk at #regsys today is a keynote by Mafalda Dias about modelling sequence variation in Evolution with insights into diseases #ismbeccb2025
RegSys Day 2!
Starting the day with a keynote by Roser Vento-Tormo on the cellular components of the placenta and uterus interaction
#ismbeccb2025
Starting the day with a keynote by Roser Vento-Tormo on the cellular components of the placenta and uterus interaction
#ismbeccb2025
July 24, 2025 at 8:26 AM
RegSys Day 2!
Starting the day with a keynote by Roser Vento-Tormo on the cellular components of the placenta and uterus interaction
#ismbeccb2025
Starting the day with a keynote by Roser Vento-Tormo on the cellular components of the placenta and uterus interaction
#ismbeccb2025
Today marks the start of the #RegSys @iscb-regsys.bsky.social track at ##ISMBECCB2025! Very much looking forward to listening to the exciting science that will be presented.
Join us in room 11BC today and tomorrow.
Join us in room 11BC today and tomorrow.
July 23, 2025 at 7:41 AM
Today marks the start of the #RegSys @iscb-regsys.bsky.social track at ##ISMBECCB2025! Very much looking forward to listening to the exciting science that will be presented.
Join us in room 11BC today and tomorrow.
Join us in room 11BC today and tomorrow.
First flash talk session starts with @aryankamal.bsky.social who represents his analysis about understanding transcriptional regulation in blood generation #regsys #ismbeccb2025
July 23, 2025 at 11:45 AM
First flash talk session starts with @aryankamal.bsky.social who represents his analysis about understanding transcriptional regulation in blood generation #regsys #ismbeccb2025
design biological sequences with cell type-specific activity using minimal number of edits and any ML model using github.com/jmschrei/led... by @jmschreiber91 #RegSys #ismbeccb2025
July 23, 2025 at 4:09 PM
design biological sequences with cell type-specific activity using minimal number of edits and any ML model using github.com/jmschrei/led... by @jmschreiber91 #RegSys #ismbeccb2025
Laura Rumpf talks about the MetaFR pipeline to learn gene regulation models from unpaired and paired scATAC and scRNA data #ismbeccb2025 #regsys #schulzlab @dzhk.de @sfb1531.bsky.social
July 23, 2025 at 1:21 PM
Laura Rumpf talks about the MetaFR pipeline to learn gene regulation models from unpaired and paired scATAC and scRNA data #ismbeccb2025 #regsys #schulzlab @dzhk.de @sfb1531.bsky.social
After a long trip and a long sleep, i am ready to enjoy the rich scientific program at #ISMBECCB2025 in Liverpool. This is also the first year of our new COSI in Computational and System Immunology (CSI) happening on Tuesday. And of course looking forward RegSys, as usual with fantastic organizers
July 21, 2025 at 8:29 AM
After a long trip and a long sleep, i am ready to enjoy the rich scientific program at #ISMBECCB2025 in Liverpool. This is also the first year of our new COSI in Computational and System Immunology (CSI) happening on Tuesday. And of course looking forward RegSys, as usual with fantastic organizers
First talk of the last session of RegSys day 1 at #ismb2025 is from Jacob Schreiber on how we read the book of DNA
Spoiler: regulation is key
Spoiler: regulation is key
July 23, 2025 at 3:43 PM
First talk of the last session of RegSys day 1 at #ismb2025 is from Jacob Schreiber on how we read the book of DNA
Spoiler: regulation is key
Spoiler: regulation is key
2nd talk at #ISMBECCB2025 by Laura Martens @lauradmartens.bsky.social ! Laura will present Scooby tomorrow at 12:20 in the RegSys COSI. Enjoy! www.biorxiv.org/content/10.1...
scooby: Modeling multi-modal genomic profiles from DNA sequence at single-cell resolution
Understanding how regulatory DNA elements shape gene expression across individual cells is a fundamental challenge in genomics. Joint RNA-seq and epigenomic profiling provides opportunities to build u...
www.biorxiv.org
July 23, 2025 at 8:37 AM
2nd talk at #ISMBECCB2025 by Laura Martens @lauradmartens.bsky.social ! Laura will present Scooby tomorrow at 12:20 in the RegSys COSI. Enjoy! www.biorxiv.org/content/10.1...
Last speaker before lunch is Christophe Vroland to talk about confounders in Rna-Dna interaction data analysis #regsys #ismbeccb2025
July 23, 2025 at 12:01 PM
Last speaker before lunch is Christophe Vroland to talk about confounders in Rna-Dna interaction data analysis #regsys #ismbeccb2025
@vitaliikl.bsky.social will discuss how biophysical deep learning improves understanding of embryogenesis. He applied cell2state, his new method leveraging TF-motif interactions and biophysical constraints, on an unpublished multimodal sc and spatial atlas.
#RegSys
📅 July 23 | 🕑 14:40 | 📍 Room 11BC
#RegSys
📅 July 23 | 🕑 14:40 | 📍 Room 11BC
July 19, 2025 at 5:33 PM
@vitaliikl.bsky.social will discuss how biophysical deep learning improves understanding of embryogenesis. He applied cell2state, his new method leveraging TF-motif interactions and biophysical constraints, on an unpublished multimodal sc and spatial atlas.
#RegSys
📅 July 23 | 🕑 14:40 | 📍 Room 11BC
#RegSys
📅 July 23 | 🕑 14:40 | 📍 Room 11BC
I'm attending #ISMBECCB2025 in Liverpool, UK, July 20-24. Who else is going? Register by March 30 to save 10% on registration and enjoy risk-free cancellation. Don’t miss it!
We're looking forward to seeing you at the #RegSys track of #ISMBECCB2025!
We're looking forward to seeing you at the #RegSys track of #ISMBECCB2025!
March 18, 2025 at 7:52 AM
I'm attending #ISMBECCB2025 in Liverpool, UK, July 20-24. Who else is going? Register by March 30 to save 10% on registration and enjoy risk-free cancellation. Don’t miss it!
We're looking forward to seeing you at the #RegSys track of #ISMBECCB2025!
We're looking forward to seeing you at the #RegSys track of #ISMBECCB2025!
Join 4 #Schulzlab related talks at #ismbeccb2025 :
Wed #RegSys 14:20 , Laura Rumpf: Single-cell ATAC&RNA analysis,
Thu #iRNACOSI 8:40, Christina Kalk – Prediction of Split-ORFs
9:40 , Tim Warwick – Pipeline for DNA-RNA analysis
12:10 , Giulia Cantini – Transformer for miRNA-mRNA prediction
Wed #RegSys 14:20 , Laura Rumpf: Single-cell ATAC&RNA analysis,
Thu #iRNACOSI 8:40, Christina Kalk – Prediction of Split-ORFs
9:40 , Tim Warwick – Pipeline for DNA-RNA analysis
12:10 , Giulia Cantini – Transformer for miRNA-mRNA prediction
July 22, 2025 at 2:00 PM
Join 4 #Schulzlab related talks at #ismbeccb2025 :
Wed #RegSys 14:20 , Laura Rumpf: Single-cell ATAC&RNA analysis,
Thu #iRNACOSI 8:40, Christina Kalk – Prediction of Split-ORFs
9:40 , Tim Warwick – Pipeline for DNA-RNA analysis
12:10 , Giulia Cantini – Transformer for miRNA-mRNA prediction
Wed #RegSys 14:20 , Laura Rumpf: Single-cell ATAC&RNA analysis,
Thu #iRNACOSI 8:40, Christina Kalk – Prediction of Split-ORFs
9:40 , Tim Warwick – Pipeline for DNA-RNA analysis
12:10 , Giulia Cantini – Transformer for miRNA-mRNA prediction
Join us in room 11 for the opening talk of the RegSys COSI track in just 20 minutes from the amazing @verapancaldi.bsky.social - don’t miss it! #ISMBECCB2025
July 23, 2025 at 10:02 AM
Join us in room 11 for the opening talk of the RegSys COSI track in just 20 minutes from the amazing @verapancaldi.bsky.social - don’t miss it! #ISMBECCB2025
Excited to be at #ISMBECCB2025! I'll be presenting at RegSys on "Learning the Regulatory Genome by Destruction and Creation" (Thursday 3:15PM in Room 11BC). I'm looking forward to connecting with both new and old friends throughout the conference! 🧬 #CRISPR #Genomics #Diffusion
July 20, 2025 at 6:37 PM
Excited to be at #ISMBECCB2025! I'll be presenting at RegSys on "Learning the Regulatory Genome by Destruction and Creation" (Thursday 3:15PM in Room 11BC). I'm looking forward to connecting with both new and old friends throughout the conference! 🧬 #CRISPR #Genomics #Diffusion
Earlier this year, we presented Nona @MIA_at_Broad (www.youtube.com/watch?v=l14F...). It also received the Best Talk Award at RegSys, ISMB 2025. 14/
MIA: Surag Nair, Nona, A Novel Multimodal Masked Modeling Framework for Functional Genomics
YouTube video by Broad Institute
www.youtube.com
November 10, 2025 at 9:01 PM
Earlier this year, we presented Nona @MIA_at_Broad (www.youtube.com/watch?v=l14F...). It also received the Best Talk Award at RegSys, ISMB 2025. 14/