PatchWorkPlot: simultaneous visualization of local alignments across multiple sequences. #AlignmentVisualization #LocalAlignments #Bioinformatics #Genomics 🧬 🖥️
academic.oup.com/bioinformati...
academic.oup.com/bioinformati...
September 18, 2025 at 1:49 PM
PatchWorkPlot: simultaneous visualization of local alignments across multiple sequences. #AlignmentVisualization #LocalAlignments #Bioinformatics #Genomics 🧬 🖥️
academic.oup.com/bioinformati...
academic.oup.com/bioinformati...
Alignoth: portable and interactive visualization of read alignments academic.oup.com/bioinformati... 🧬🖥️🧪
Code (Rust, MIT): github.com/alignoth/ali...
Demo: alignoth.github.io/preview.html
Code (Rust, MIT): github.com/alignoth/ali...
Demo: alignoth.github.io/preview.html
January 13, 2026 at 5:01 PM
Alignoth: portable and interactive visualization of read alignments academic.oup.com/bioinformati... 🧬🖥️🧪
Code (Rust, MIT): github.com/alignoth/ali...
Demo: alignoth.github.io/preview.html
Code (Rust, MIT): github.com/alignoth/ali...
Demo: alignoth.github.io/preview.html
PatchWorkPlot: simultaneous visualization of local alignments across multiple sequences arxiv.org/abs/2503.20766 🧬🖥️🧪 github.com/yana-safonov...
March 27, 2025 at 3:30 PM
PatchWorkPlot: simultaneous visualization of local alignments across multiple sequences arxiv.org/abs/2503.20766 🧬🖥️🧪 github.com/yana-safonov...
Complex structural variant visualization with SVTopo www.biorxiv.org/content/10.1... 🧬🖥️🧪 github.com/PacificBiosc...
April 23, 2025 at 8:01 PM
Complex structural variant visualization with SVTopo www.biorxiv.org/content/10.1... 🧬🖥️🧪 github.com/PacificBiosc...
Just a nice reminder! 🧪🧬🖥️ I found this GitHub very useful: github.com/cxli233/Frie...
GitHub - cxli233/FriendsDontLetFriends: Friends don't let friends make certain types of data visualization - What are they and why are they bad.
Friends don't let friends make certain types of data visualization - What are they and why are they bad. - GitHub - cxli233/FriendsDontLetFriends: Friends don't let friends make certain ty...
github.com
May 25, 2025 at 7:05 AM
Just a nice reminder! 🧪🧬🖥️ I found this GitHub very useful: github.com/cxli233/Frie...
Datavzrd: Rapid programming- and maintenance-free interactive visualization and communication of tabular data www.biorxiv.org/content/10.1... 🧬🖥️🧪
April 14, 2025 at 8:01 PM
Datavzrd: Rapid programming- and maintenance-free interactive visualization and communication of tabular data www.biorxiv.org/content/10.1... 🧬🖥️🧪
Claude scientific skills 🧬🖥️🧪
github.com/K-Dense-AI/c...
🧬 Bioinformatics & Genomics
🧪 Cheminformatics & Drug Discovery
🔬 Proteomics & Mass Spectrometry
🤖 Machine Learning & AI
🔮 Materials Science & Chemistry
📊 Data Analysis & Visualization
github.com/K-Dense-AI/c...
🧬 Bioinformatics & Genomics
🧪 Cheminformatics & Drug Discovery
🔬 Proteomics & Mass Spectrometry
🤖 Machine Learning & AI
🔮 Materials Science & Chemistry
📊 Data Analysis & Visualization
November 12, 2025 at 10:14 AM
Claude scientific skills 🧬🖥️🧪
github.com/K-Dense-AI/c...
🧬 Bioinformatics & Genomics
🧪 Cheminformatics & Drug Discovery
🔬 Proteomics & Mass Spectrometry
🤖 Machine Learning & AI
🔮 Materials Science & Chemistry
📊 Data Analysis & Visualization
github.com/K-Dense-AI/c...
🧬 Bioinformatics & Genomics
🧪 Cheminformatics & Drug Discovery
🔬 Proteomics & Mass Spectrometry
🤖 Machine Learning & AI
🔮 Materials Science & Chemistry
📊 Data Analysis & Visualization
Pedixplorer: a Bioconductor package to streamline pedigree design and visualization. #PedigreeDesign #PedigreeVisualization #Bioconductor #Bioinformatics 🧬 🖥️
academic.oup.com/bioinformati...
louislenezet.github.io/Pedixplorer/
academic.oup.com/bioinformati...
louislenezet.github.io/Pedixplorer/
June 12, 2025 at 8:31 AM
Pedixplorer: a Bioconductor package to streamline pedigree design and visualization. #PedigreeDesign #PedigreeVisualization #Bioconductor #Bioinformatics 🧬 🖥️
academic.oup.com/bioinformati...
louislenezet.github.io/Pedixplorer/
academic.oup.com/bioinformati...
louislenezet.github.io/Pedixplorer/
Gene-Set Enrichment Analysis and visualization on the web using EnrichmentMap: RNASeq. #GeneSetEnrichmentAnalysis #WebTool #Bioinformatics @bioinfoadv.bsky.social 🧬 🖥️
academic.oup.com/bioinformati...
academic.oup.com/bioinformati...
July 26, 2025 at 8:31 AM
Gene-Set Enrichment Analysis and visualization on the web using EnrichmentMap: RNASeq. #GeneSetEnrichmentAnalysis #WebTool #Bioinformatics @bioinfoadv.bsky.social 🧬 🖥️
academic.oup.com/bioinformati...
academic.oup.com/bioinformati...
Weekly Recap (June 2025, part 2): Interactive visualization of tabular data, shared foundations of gene expression and chromatin structure, fast protein structure searching with graph embeddings, visualizing cis-regulatory rules 🧬🖥️🧪 doi.org/10.59350/wrg...
June 27, 2025 at 8:56 PM
Weekly Recap (June 2025, part 2): Interactive visualization of tabular data, shared foundations of gene expression and chromatin structure, fast protein structure searching with graph embeddings, visualizing cis-regulatory rules 🧬🖥️🧪 doi.org/10.59350/wrg...
EasyPubPlot: a shiny web application for rapid omics data exploration and visualization. #EasyPublishablePlotting #Shiny #R #DataExploration @biorxivpreprint.bsky.social 🧬 🖥️
www.biorxiv.org/content/10.1...
www.biorxiv.org/content/10.1...
December 1, 2024 at 7:48 PM
EasyPubPlot: a shiny web application for rapid omics data exploration and visualization. #EasyPublishablePlotting #Shiny #R #DataExploration @biorxivpreprint.bsky.social 🧬 🖥️
www.biorxiv.org/content/10.1...
www.biorxiv.org/content/10.1...
A workflow for statistical analysis and visualization of microbiome omics data using the #Rstats microeco package www.nature.com/articles/s41... 🧬🖥️🧪 read free: rdcu.be/eAqjd 📦 github.com/ChiLiubio/mi...
August 12, 2025 at 3:30 PM
A workflow for statistical analysis and visualization of microbiome omics data using the #Rstats microeco package www.nature.com/articles/s41... 🧬🖥️🧪 read free: rdcu.be/eAqjd 📦 github.com/ChiLiubio/mi...
Deciphering cancer genomes with GenomeSpy: a grammar-based visualization toolkit academic.oup.com/gigascience/... 🧬🖥️
Deciphering cancer genomes with GenomeSpy: a grammar-based visualization toolkit
AbstractBackground. Visualization is an indispensable facet of genomic data analysis. Despite the abundance of specialized visualization tools, there remai
academic.oup.com
July 3, 2025 at 6:30 PM
Deciphering cancer genomes with GenomeSpy: a grammar-based visualization toolkit academic.oup.com/gigascience/... 🧬🖥️
RegionScan: #Rstats package for region-level genome-wide association testing with integration and visualization academic.oup.com/bioinformati... 🧬🖥️🧪
April 1, 2025 at 8:00 PM
RegionScan: #Rstats package for region-level genome-wide association testing with integration and visualization academic.oup.com/bioinformati... 🧬🖥️🧪
Gene-Set Enrichment Analysis and visualization on the web using EnrichmentMap: RNASeq. #GSEA #WebTool #RNAseq #Bioinformatics @bioinfoadv.bsky.social 🧬 🖥️
academic.oup.com/bioinformati...
academic.oup.com/bioinformati...
August 7, 2025 at 1:49 PM
Gene-Set Enrichment Analysis and visualization on the web using EnrichmentMap: RNASeq. #GSEA #WebTool #RNAseq #Bioinformatics @bioinfoadv.bsky.social 🧬 🖥️
academic.oup.com/bioinformati...
academic.oup.com/bioinformati...
GWAS SVatalog: a visualization tool to aid fine-mapping of GWAS loci with structural variations www.biorxiv.org/content/10.1... 🧬🖥️🧪 svatalog.research.sickkids.ca
September 5, 2025 at 3:55 PM
GWAS SVatalog: a visualization tool to aid fine-mapping of GWAS loci with structural variations www.biorxiv.org/content/10.1... 🧬🖥️🧪 svatalog.research.sickkids.ca
Lots of invaluable advice here for both early stage researchers and well established folk. Well thought out impactful figures are key to getting your points across, and it's all too common to see poor practice 🧪🧬🖥️🌍 #datavis #bioinformatics
www.nature.com/articles/s41...
www.nature.com/articles/s41...
A checklist for designing and improving the visualization of scientific data - Nature Cell Biology
Creating clear and engaging scientific figures is crucial to communicate complex data. In this Comment, I condense principles from design, visual perception and data visualization research in a checkl...
www.nature.com
July 4, 2025 at 6:52 AM
Lots of invaluable advice here for both early stage researchers and well established folk. Well thought out impactful figures are key to getting your points across, and it's all too common to see poor practice 🧪🧬🖥️🌍 #datavis #bioinformatics
www.nature.com/articles/s41...
www.nature.com/articles/s41...
XVCF: Exquisite Visualization of VCF Data from Genomic Experiments www.biorxiv.org/content/10.1... 🧬🖥️🧪
May 7, 2025 at 3:30 PM
XVCF: Exquisite Visualization of VCF Data from Genomic Experiments www.biorxiv.org/content/10.1... 🧬🖥️🧪
GW: ultra-fast chromosome-scale visualization of genomics data www.nature.com/articles/s41... (read free: rdcu.be/etLa3) 🧬🖥️🧪
Code (MIT): github.com/kcleal/gw
Docs: kcleal.github.io/gw/
Code (MIT): github.com/kcleal/gw
Docs: kcleal.github.io/gw/
June 27, 2025 at 3:30 PM
GW: ultra-fast chromosome-scale visualization of genomics data www.nature.com/articles/s41... (read free: rdcu.be/etLa3) 🧬🖥️🧪
Code (MIT): github.com/kcleal/gw
Docs: kcleal.github.io/gw/
Code (MIT): github.com/kcleal/gw
Docs: kcleal.github.io/gw/
RiboSeq.Org: an integrated suite of resources for ribosome profiling data analysis and visualization. #RiboSeq #RibosomeProfiling #Genomics #NAR 🧬 🖥️
academic.oup.com/nar/advance-...
academic.oup.com/nar/advance-...
RiboSeq.Org: an integrated suite of resources for ribosome profiling data analysis and visualization
Abstract. Ribosome profiling (Ribo-Seq) has revolutionised our understanding of translation, but the increasing complexity and volume of Ribo-Seq data pres
academic.oup.com
November 26, 2024 at 12:09 AM
RiboSeq.Org: an integrated suite of resources for ribosome profiling data analysis and visualization. #RiboSeq #RibosomeProfiling #Genomics #NAR 🧬 🖥️
academic.oup.com/nar/advance-...
academic.oup.com/nar/advance-...
A workflow for statistical analysis and visualization of microbiome omics data using the R microeco package. #Microbiome #OmicsData #DataAnalysis #R @natprot.nature.com 🧬 🖥️
www.nature.com/articles/s41...
www.nature.com/articles/s41...
August 13, 2025 at 8:31 AM
A workflow for statistical analysis and visualization of microbiome omics data using the R microeco package. #Microbiome #OmicsData #DataAnalysis #R @natprot.nature.com 🧬 🖥️
www.nature.com/articles/s41...
www.nature.com/articles/s41...
GW: ultra-fast chromosome-scale visualization of genomics data. #GenomeVisualization #Bioinformatics #Genomics @natmethods.nature.com 🧬 🖥️
www.nature.com/articles/s41...
www.nature.com/articles/s41...
June 27, 2025 at 10:30 AM
GW: ultra-fast chromosome-scale visualization of genomics data. #GenomeVisualization #Bioinformatics #Genomics @natmethods.nature.com 🧬 🖥️
www.nature.com/articles/s41...
www.nature.com/articles/s41...
Bonsai: Tree representations for distortion-free visualization and exploratory analysis of single-cell omics data www.biorxiv.org/content/10.1... 🧬🖥️🧪 github.com/dhdegroot/Bo...
May 9, 2025 at 3:30 PM
Bonsai: Tree representations for distortion-free visualization and exploratory analysis of single-cell omics data www.biorxiv.org/content/10.1... 🧬🖥️🧪 github.com/dhdegroot/Bo...
Fourth in this series: Using uv with Jupyter, with a demo using polars and seaborn for analysis and visualization doi.org/10.59350/y0y... 🧬🖥️🧪
June 23, 2025 at 1:03 PM
Fourth in this series: Using uv with Jupyter, with a demo using polars and seaborn for analysis and visualization doi.org/10.59350/y0y... 🧬🖥️🧪
Uncalled4 improves nanopore DNA and RNA modification detection via fast and accurate signal alignment. #DNAmodifications @nanoporetech.com #Sequencing #Bioinformatics @naturemethods.bsky.social 🧬🖥️
www.nature.com/articles/s41...
www.nature.com/articles/s41...
Uncalled4 improves nanopore DNA and RNA modification detection via fast and accurate signal alignment - Nature Methods
Uncalled4 is a toolkit for nanopore signal alignment, analysis and visualization allowing for performant detection and analysis of DNA and RNA modifications.
www.nature.com
March 29, 2025 at 10:12 PM
Uncalled4 improves nanopore DNA and RNA modification detection via fast and accurate signal alignment. #DNAmodifications @nanoporetech.com #Sequencing #Bioinformatics @naturemethods.bsky.social 🧬🖥️
www.nature.com/articles/s41...
www.nature.com/articles/s41...