#mBio
Metabolomics in microbiology: interrogating microbial physiology and interactions

Mini-review in mBio

journals.asm.org/doi/10.1128/...
October 11, 2026 at 10:54 AM
Recent work has shown that mice with broad microbial exposure more appropriately mimic human vaccine immune responses such as requiring booster doses and showing faster antibody waning better than the SPF mice ( journals.asm.org/doi/10.1128/... ).
Dirty mice better recapitulate key features of mRNA vaccine immunogenicity observed in humans | mBio
The development of mRNA vaccines during the COVID-19 pandemic dramatically reduced hospitalization and death rates for infected individuals. However, booster vaccinations were required to achieve high...
journals.asm.org
October 15, 2026 at 1:30 AM
Lovely work from Ellermeier group et al to solve the mystery of why the LDTs are essential in Cdif! Congrats to all involved!
Carboxypeptidase activity drives L,D-transpeptidase essentiality during vegetative growth and sporulation in Clostridioides difficile | mBio journals.asm.org/doi/full/10....
Carboxypeptidase activity drives L,D-transpeptidase essentiality during vegetative growth and sporulation in Clostridioides difficile | mBio
Synthesis of peptidoglycan (PG) in the opportunistic gut pathogen Clostridioides difficile depends mostly on 3-3 crosslinks formed by L,D-transpeptidases (LDTs). Here, we converted C. difficile from a...
journals.asm.org
October 11, 2026 at 10:45 PM
RRIDs were included in this in mBio paper. Thanks for making your methods matter! #accelerateopenscience #OpenResearch #methodsmatter
IFI207 promotes antiviral responses by modulating STING ubiquitination and degradation
Read the full paper: IFI207 promotes antiviral responses by modulating STING ubiquitination and degradation
doi.org
October 11, 2026 at 7:01 AM
Our new study, which has just been published in mBio, presents Cryptonaiada temporaria – the first known gregarine to have evolved to parasitise vertebrates.
@mbio.bsky.social #Apicomplexa #Gregarines #Parasitology #Evolution #mBio #Cryptonaiada

journals.asm.org/doi/10.1128/...
October 6, 2026 at 8:50 AM
The authors included RRIDs in their in mBio paper! We value the author's support of reproducibility. #OpenResearch #STMpublishing #accelerateopenscience
The bacterial pH gradient contributes to persistence in Mycobacterium tuberculosis
Read the full paper: The bacterial pH gradient contributes to persistence in Mycobacterium tuberculosis
doi.org
October 9, 2026 at 7:04 AM
RRIDs were included in this in mBio paper. Thanks for making your methods matter! #OpenScience #methodsmatter #RRID
Impaired envelope integrity in the absence of SanA is linked to increased lipid II availability and an imbalance of septal peptidoglycan synthesis
Read the full paper: Impaired envelope integrity in the absence of SanA is linked to increased lipid II availability and an imbalance of septal peptidoglycan synthesis
doi.org
October 11, 2026 at 7:00 AM
RRIDs were included in this in mBio paper. RRIDs improve reproducibility in scientific research. #BetterScience #OpenScience #ReproducibleResearch
Two closely related β-1,2-xylosyltransferases differentially impact cryptococcal glycan synthesis
Read the full paper: Two closely related β-1,2-xylosyltransferases differentially impact cryptococcal glycan synthesis
doi.org
October 9, 2026 at 7:10 AM
The authors included RRIDs in their in mBio paper! We value the author's support of reproducibility. #BetterScience #accelerateopenscience #OpenScience
A structural bridge between dengue virus tandem xrRNAs facilitates coordination of exonuclease resistance
Read the full paper: A structural bridge between dengue virus tandem xrRNAs facilitates coordination of exonuclease resistance
doi.org
October 9, 2026 at 7:04 AM
The authors included RRIDs in their in mBio paper! RRIDs improve reproducibility in scientific research. #STMpublishing #OpenResearch #BetterScience
NAT10 is critical to block RNA sensing-induced IFN-β transactivation in viral infection
Read the full paper: NAT10 is critical to block RNA sensing-induced IFN-β transactivation in viral infection
doi.org
October 9, 2026 at 7:04 AM
RRIDs were included in this in mBio paper. We value the author's support of reproducibility. #BetterScience #RRID #ReproducibleResearch
An inducible CRISPRi system for phenotypic analysis of essential genes in Pseudomonas aeruginosa
Read the full paper: An inducible CRISPRi system for phenotypic analysis of essential genes in Pseudomonas aeruginosa
doi.org
October 9, 2026 at 7:15 AM
RRIDs were included in this in mBio paper. We value the author's support of reproducibility. #RRID #OpenScience #STMpublishing
HIV-1 Vpr induces an NFAT-controlled transcriptional program in primary CD4+ T cells
Read the full paper: HIV-1 Vpr induces an NFAT-controlled transcriptional program in primary CD4+ T cells
doi.org
October 9, 2026 at 7:15 AM
RRIDs were included in this in mBio paper. We value the author's support of reproducibility. #ReproducibleResearch #STMpublishing #methodsmatter
YhcB mediates growth-phase control of fatty acid biosynthesis through regulation of acetyl-CoA carboxylase
Read the full paper: YhcB mediates growth-phase control of fatty acid biosynthesis through regulation of acetyl-CoA carboxylase
doi.org
October 9, 2026 at 7:10 AM
RRIDs were included in this in mBio paper. We value the author's support of reproducibility. #BetterScience #accelerateopenscience #OpenResearch
HCMV promotes viral reactivation through the coordinated regulation of Notch signaling by UL8 and miR-UL36
Read the full paper: HCMV promotes viral reactivation through the coordinated regulation of Notch signaling by UL8 and miR-UL36
doi.org
October 9, 2026 at 7:10 AM
The authors included RRIDs in their in mBio paper! RRIDs improve reproducibility in scientific research. #ReproducibleResearch #STMpublishing #methodsmatter
PRRSV suppresses FTO-dependent m6A demethylation to reprogram STAT signaling and innate immunity
Read the full paper: PRRSV suppresses FTO-dependent m6A demethylation to reprogram STAT signaling and innate immunity
doi.org
October 8, 2026 at 7:04 AM
RRIDs were included in this in mBio paper. Thanks for making your methods matter! #methodsmatter #STMpublishing #reproducibility
Differentiation-independent activation of HPV genome replication by the lncRNA DINO
Read the full paper: Differentiation-independent activation of HPV genome replication by the lncRNA DINO
doi.org
October 8, 2026 at 7:04 AM
OCE is now apparently a 'program' and not a division. Includes mbio, chemoc, physoc, OTIC, and MGG/subseafloor sampling.
October 5, 2026 at 7:08 PM
Delighted to see @ruthlessruth15.bsky.social's postdoc work out today, with fantastic undergrads Celine & Fatimah as co-authors! 🎉 Very fun story about bacterial competition w/ lots still to untangle. Sometimes you just need to mix cells together & see what happens! journals.asm.org/doi/10.1128/...
Streptococcal mutanobactin mediates interspecies competition with gram-positive bacteria | mBio
Antimicrobial resistance requires new therapeutics to treat drug-resistant infections. Novel antimicrobial compounds can be discovered in polymicrobial communities, where bacterial natural products promote competitive fitness. The oral cavity hosts a microbial consortium, and we investigated interactions between oral streptococci and Enterococcus faecalis, a common cause of root canal infections. We demonstrate antibacterial activity of streptococcal mutanobactin against gram-positive pathogens, including antibiotic-resistant isolates. We further show that the E. faecalis virulence factor gelatinase promotes recovery from mutanobactin-mediated reduction in viability, and that mutanobactin prevents and kills E. faecalis biofilms. By probing interactions between bacteria that occupy the same niche and characterizing antibacterial activity of a bacterial product, this work contributes to broader efforts to identify and develop antibiotics to treat clinically relevant drug-resistant infections.
journals.asm.org
October 6, 2026 at 1:34 PM
Latest publication from Otago Biochemistry.
Altered physiology of drug-resistant Mycobacterium tuberculosis restricts adaptation to host-relevant conditions and produces condition-dependent collateral vulnerabilities
journals.asm.org/doi/10.1128/...
Altered physiology of drug-resistant Mycobacterium tuberculosis restricts adaptation to host-relevant conditions and produces condition-dependent collateral vulnerabilities | mBio
Mutations that provide antibiotic resistance in bacterial pathogens often disrupt key cellular processes. The effects of these disruptions on cellular physiology are poorly understood, especially with...
journals.asm.org
October 5, 2026 at 1:50 AM