Metagraph: the new search engine that can quickly sift through the staggering volumes of biological data housed in public repositories
go.nature.com/48lM8Kh
go.nature.com/48lM8Kh
‘Google for DNA’ brings order to biology’s big data
MetaGraph compresses vast data archives into a search engine for scientists, opening up new frontiers of biological discovery.
go.nature.com
October 8, 2025 at 4:22 PM
Metagraph: the new search engine that can quickly sift through the staggering volumes of biological data housed in public repositories
go.nature.com/48lM8Kh
go.nature.com/48lM8Kh
After years of research and continuous refinement, we’re thrilled to share that our paper on the MetaGraph framework — enabling Petabase-scale search across sequencing data — has been published today in Nature (www.nature.com/articles/s41...)
Efficient and accurate search in petabase-scale sequence repositories - Nature
MetaGraph enables scalable indexing of large sets of DNA, RNA or protein sequences using annotated de Bruijn graphs.
www.nature.com
October 8, 2025 at 8:56 PM
After years of research and continuous refinement, we’re thrilled to share that our paper on the MetaGraph framework — enabling Petabase-scale search across sequencing data — has been published today in Nature (www.nature.com/articles/s41...)
The Metagraph paper is out in Nature; it showed up in my feeds today! Congratulations to Mikhail Karasikov, @gxxxr.bsky.social, @akkah21.bsky.social and all of the other authors (whom I'd love to follow on Bluesky if I can find you ;P) www.nature.com/articles/s41...
Efficient and accurate search in petabase-scale sequence repositories - Nature
MetaGraph enables scalable indexing of large sets of DNA, RNA or protein sequences using annotated de Bruijn graphs.
www.nature.com
October 9, 2025 at 2:40 PM
The Metagraph paper is out in Nature; it showed up in my feeds today! Congratulations to Mikhail Karasikov, @gxxxr.bsky.social, @akkah21.bsky.social and all of the other authors (whom I'd love to follow on Bluesky if I can find you ;P) www.nature.com/articles/s41...
Efficient and accurate search in petabase-scale sequence repositories www.nature.com/articles/s41... 🧬🖥️🧪
MetaGraph: metagraph.ethz.ch
Code: github.com/ratschlab/me...
MetaGraph: metagraph.ethz.ch
Code: github.com/ratschlab/me...
October 9, 2025 at 5:10 PM
Efficient and accurate search in petabase-scale sequence repositories www.nature.com/articles/s41... 🧬🖥️🧪
MetaGraph: metagraph.ethz.ch
Code: github.com/ratschlab/me...
MetaGraph: metagraph.ethz.ch
Code: github.com/ratschlab/me...
"The Internet has Google. Now biology has MetaGraph. Detailed today in Nature1, the search engine can quickly sift through the staggering volumes of biological data housed in public repositories." 🧪 www.nature.com/articles/d41... anyone try this? What's it like?
‘Google for DNA’ brings order to biology’s big data
MetaGraph compresses vast data archives into a search engine for scientists, opening up new frontiers of biological discovery.
www.nature.com
October 9, 2025 at 10:25 PM
"The Internet has Google. Now biology has MetaGraph. Detailed today in Nature1, the search engine can quickly sift through the staggering volumes of biological data housed in public repositories." 🧪 www.nature.com/articles/d41... anyone try this? What's it like?
Ca n'est pas si souvent, un article publié dans Nature met ma communauté à l'honneur (la bioinformatique des séquences). Je vous raconte ?
www.nature.com/articles/d41...
www.nature.com/articles/d41...
‘Google for DNA’ brings order to biology’s big data
MetaGraph compresses vast data archives into a search engine for scientists, opening up new frontiers of biological discovery.
www.nature.com
October 9, 2025 at 3:00 PM
Ca n'est pas si souvent, un article publié dans Nature met ma communauté à l'honneur (la bioinformatique des séquences). Je vous raconte ?
www.nature.com/articles/d41...
www.nature.com/articles/d41...
Harun Mustafa presents "Efficient, accurate, SRA-scale indexing and query" at #GI2025
MetaGraph is a highly compressed representation
of all public biological sequences!
nature.com/articles/s41586-025-09603-w
Try it online: metagraph.ethz.ch/search
MetaGraph is a highly compressed representation
of all public biological sequences!
nature.com/articles/s41586-025-09603-w
Try it online: metagraph.ethz.ch/search
November 6, 2025 at 4:09 PM
Harun Mustafa presents "Efficient, accurate, SRA-scale indexing and query" at #GI2025
MetaGraph is a highly compressed representation
of all public biological sequences!
nature.com/articles/s41586-025-09603-w
Try it online: metagraph.ethz.ch/search
MetaGraph is a highly compressed representation
of all public biological sequences!
nature.com/articles/s41586-025-09603-w
Try it online: metagraph.ethz.ch/search
We invite you to try out Metagraph at metagraph.ethz.ch, learn more about our framework in the paper (nature.com/articles/s41...) or start building your own indexes from your own data (github.com/ratschlab/me...).
MetaGraph - Biological Sequence Search
Petabase-Scale Search for DNA, RNA & Amino acids
metagraph.ethz.ch
October 8, 2025 at 8:56 PM
We invite you to try out Metagraph at metagraph.ethz.ch, learn more about our framework in the paper (nature.com/articles/s41...) or start building your own indexes from your own data (github.com/ratschlab/me...).
MetaGraph by Karasikov and coauthors makes the world’s DNA searchable. By turning 67 petabases of raw sequences into a compressed graph structure, it enables fast, low-cost search across global genomic data—bringing biology closer to having its own “search engine”. www.nature.com/articles/s41...
Efficient and accurate search in petabase-scale sequence repositories - Nature
MetaGraph enables scalable indexing of large sets of DNA, RNA or protein sequences using annotated de Bruijn graphs.
www.nature.com
October 13, 2025 at 12:20 PM
MetaGraph by Karasikov and coauthors makes the world’s DNA searchable. By turning 67 petabases of raw sequences into a compressed graph structure, it enables fast, low-cost search across global genomic data—bringing biology closer to having its own “search engine”. www.nature.com/articles/s41...
A Bittensor mining app is a stack: miner hotkey registration, metagraph reads, and RPC for chain data plus extrinsics. Public endpoints are fine for testing; production miners usually want a dedicated node or managed RPC. onfinality.io/en/rpc-assis...
September 24, 2026 at 10:09 PM
A Bittensor mining app is a stack: miner hotkey registration, metagraph reads, and RPC for chain data plus extrinsics. Public endpoints are fine for testing; production miners usually want a dedicated node or managed RPC. onfinality.io/en/rpc-assis...
A paper in Nature presents MetaGraph, which indexes petabase-scale biological sequences for accurate and efficient searches across vast sequence space 🧪👇
www.nature.com/articles/s41...
www.nature.com/articles/s41...
Efficient and accurate search in petabase-scale sequence repositories - Nature
MetaGraph enables scalable indexing of large sets of DNA, RNA or protein sequences using annotated de Bruijn graphs.
www.nature.com
October 8, 2025 at 4:54 PM
A paper in Nature presents MetaGraph, which indexes petabase-scale biological sequences for accurate and efficient searches across vast sequence space 🧪👇
www.nature.com/articles/s41...
www.nature.com/articles/s41...
The Internet has Google. Now biology has MetaGraph. Detailed today in Nature1, the search engine can quickly sift through the staggering volumes of biological data housed in public repositories.
www.nature.com/articles/d41...
www.nature.com/articles/d41...
‘Google for DNA’ brings order to biology’s big data
MetaGraph compresses vast data archives into a search engine for scientists, opening up new frontiers of biological discovery.
www.nature.com
October 13, 2025 at 6:48 AM
The Internet has Google. Now biology has MetaGraph. Detailed today in Nature1, the search engine can quickly sift through the staggering volumes of biological data housed in public repositories.
www.nature.com/articles/d41...
www.nature.com/articles/d41...
Modern biology produces vast amounts of raw sequencing data — genomes, transcriptomes, and protein sequences. MetaGraph provides a unified computational framework to index, query, and reason across this landscape of biological information.
October 8, 2025 at 8:56 PM
Modern biology produces vast amounts of raw sequencing data — genomes, transcriptomes, and protein sequences. MetaGraph provides a unified computational framework to index, query, and reason across this landscape of biological information.
We show that MetaGraph indexes are both scalable and cost-efficient for querying. We Searching 1 Mbp of sequence against the entire SRA costs less than $1 on standard cloud infrastructure — making Petabase-scale biological data truly searchable and accessible.
October 8, 2025 at 8:56 PM
We show that MetaGraph indexes are both scalable and cost-efficient for querying. We Searching 1 Mbp of sequence against the entire SRA costs less than $1 on standard cloud infrastructure — making Petabase-scale biological data truly searchable and accessible.
🌐 Complex Systems Modeling:
• Multi-scale representation (micro to macro)
• Ecological networks & dependencies
• Sustainable infrastructure
• Healthcare system interdependencies
Model the complexity that matters.
#ComplexSystems #DataScience #metagraph
• Multi-scale representation (micro to macro)
• Ecological networks & dependencies
• Sustainable infrastructure
• Healthcare system interdependencies
Model the complexity that matters.
#ComplexSystems #DataScience #metagraph
December 1, 2025 at 7:37 AM
🌐 Complex Systems Modeling:
• Multi-scale representation (micro to macro)
• Ecological networks & dependencies
• Sustainable infrastructure
• Healthcare system interdependencies
Model the complexity that matters.
#ComplexSystems #DataScience #metagraph
• Multi-scale representation (micro to macro)
• Ecological networks & dependencies
• Sustainable infrastructure
• Healthcare system interdependencies
Model the complexity that matters.
#ComplexSystems #DataScience #metagraph
At its core, MetaGraph represents all input sequences as labeled, succinct de Bruijn graphs — a highly compressed yet fully searchable structure. Each k-mer carries metadata labels that remain interactively queryable through a flexible API.
October 8, 2025 at 8:56 PM
At its core, MetaGraph represents all input sequences as labeled, succinct de Bruijn graphs — a highly compressed yet fully searchable structure. Each k-mer carries metadata labels that remain interactively queryable through a flexible API.
🔎 Check out MetaGraph – a powerful search engine for DNA, RNA and protein sequences in large public repositories. This important milestone in computational genomics was published in Nature, by SIB scientists at ETH Zurich.
A fast, accurate ‘sequence search engine’
The MetaGraph tool can search through millions of published DNA, RNA and protein records in a matter of seconds. Developed by SIB scientists at ETH Zurich, the tool overcomes current limitations in an...
www.sib.swiss
October 13, 2025 at 9:04 AM
🔎 Check out MetaGraph – a powerful search engine for DNA, RNA and protein sequences in large public repositories. This important milestone in computational genomics was published in Nature, by SIB scientists at ETH Zurich.
"Google for DNA" -- this sounds incredible!!
www.nature.com/articles/d41...
www.nature.com/articles/d41...
‘Google for DNA’ brings order to biology’s big data
MetaGraph compresses vast data archives into a search engine for scientists, opening up new frontiers of biological discovery.
www.nature.com
October 10, 2025 at 1:15 AM
"Google for DNA" -- this sounds incredible!!
www.nature.com/articles/d41...
www.nature.com/articles/d41...
🧪MetaGraph compresses and organizes genomic sequence data into a searchable format, enabling efficient scanning on personal computers. This tool indexes sequences from diverse organisms, streamlining genomic research. 🧬🖥️
‘Google for DNA’ indexes 10% of world’s known genetic sequences
Achievement demonstrates feasibility of making all of life’s code easily searchable, researchers say
www.science.org
June 10, 2024 at 4:54 PM
🧪MetaGraph compresses and organizes genomic sequence data into a searchable format, enabling efficient scanning on personal computers. This tool indexes sequences from diverse organisms, streamlining genomic research. 🧬🖥️
Druva has launched MetaGraph, a secure metadata intelligence layer that works with its DruAI Agents to turn backup data into real-time insights, enabling faster cyber, compliance, and operational decisions.
virtualizationreview.com/Articles/202...
#Druva #MetaGraph #DataSecurity #TechNews
virtualizationreview.com/Articles/202...
#Druva #MetaGraph #DataSecurity #TechNews
Druva Launches MetaGraph to Advance Agentic Data Security -- Virtualization Review
Druva has launched MetaGraph, a secure metadata intelligence layer that works with its DruAI Agents to turn backup data into real-time insights, enabling faster cyber, compliance, and operational deci...
virtualizationreview.com
September 17, 2025 at 5:30 PM
Druva has launched MetaGraph, a secure metadata intelligence layer that works with its DruAI Agents to turn backup data into real-time insights, enabling faster cyber, compliance, and operational decisions.
virtualizationreview.com/Articles/202...
#Druva #MetaGraph #DataSecurity #TechNews
virtualizationreview.com/Articles/202...
#Druva #MetaGraph #DataSecurity #TechNews
(Okay more properly it‘s a metagraph. But also hypergraphs. Meta-hypergraphs.)
November 6, 2025 at 7:15 AM
(Okay more properly it‘s a metagraph. But also hypergraphs. Meta-hypergraphs.)