#nardatabaseissue
LightNews LightNews
bffo.bsky.social
From Sameer Velankar & colleagues in @narjournal.bsky.social #NARDatabaseIssue | #AlphaFold #Protein #Structure #Database 2025: a redesigned interface and updated structural coverage | #Bioinformatics #Proteomics #OpenScience #AFDB 🧪🔓 CC/ @ebi.embl.org
⬇️
academic.oup.com/nar/advance-...
AlphaFold Protein Structure Database 2025: a redesigned interface and updated structural coverage
Abstract. The AlphaFold Protein Structure Database (AFDB; https://alphafold.ebi.ac.uk), developed by EMBL–EBI and Google DeepMind, provides open access to
academic.oup.com
November 24, 2025 at 12:56 AM
bffo.bsky.social
From @jhcepas.bsky.social and colleagues in the @narjournal.bsky.social #NARDatabaseIssue | eggNOG v7: phylogeny-based orthology predictions and functional annotations | #Bioinformatics #ProteinCentric #Database #OpenScience 🧬 🖥️🧪🇨🇭🇪🇸🇩🇪🔓
⬇️
academic.oup.com/nar/advance-...
eggNOG v7: phylogeny-based orthology predictions and functional annotations
Abstract. The eggNOG (evolutionary genealogy of genes: Non-supervised Orthologous Groups) database is a phylogenomic resource for orthology inference, evol
academic.oup.com
December 9, 2025 at 1:39 PM
bffo.bsky.social
From @gillespm.bsky.social and colleagues in @narjournal.bsky.social #NARDatabaseIssue | The #Reactome Knowledgebase 2026 | #Bioinformatics #Proteomics #Human #OpenScience #OpenData #OpenSource #Database #GlobalCoreBiodata and @elixir-europe.org resource 🧬 🖥️🧪🔓
⬇️
academic.oup.com/nar/advance-...
The Reactome Knowledgebase 2026
Abstract. The Reactome Knowledgebase (https://reactome.org) is a freely accessible, expert-curated, open-source, and open-data resource that describes huma
academic.oup.com
November 19, 2025 at 5:52 PM
bffo.bsky.social
From the @narjournal.bsky.social #NARDatabaseIssue | EMBL's European Bioinformatics Institute (EMBL-EBI) in 2025 | #Bioinformatics #OpenData #OpenScience #Proteomics #Genomics #Bioimaging 🧬 🖥️🧪🔓
⬇️
academic.oup.com/nar/advance-...
EMBL’s European Bioinformatics Institute (EMBL-EBI) in 2025
Abstract. The European Molecular Biology Laboratory’s European Bioinformatics Institute (EMBL-EBI) is one of the world’s leading sources of public biomolec
academic.oup.com
November 15, 2025 at 2:38 PM
toptags.bsky.social
🔥 BlueSky trending hashtags (30m):

#booksky #photography #romancelandia #art #gamedev #nardatabaseissue #tfbs #database #jaspar #genomics #openscience #bioinformatics #christmas #indiedev #wcsj25 #birds #birdphotography #highkey #cardinals #wildlifephotography
December 2, 2025 at 1:30 PM
bffo.bsky.social
From the @genomebrowser.bsky.social team in @narjournal.bsky.social #NARDatabaseIssue | The UCSC Genome Browser database: 2026 update | #Bioinformatics #Genomics #Database #OpenScience 🧬 🖥️🧪🔓
⬇️
academic.oup.com/nar/advance-...
The UCSC Genome Browser database: 2026 update
Abstract. Now in its 25th year of operation, the UCSC Genome Browser (https://genome.ucsc.edu) provides a central location for researchers around the world
academic.oup.com
November 19, 2025 at 6:04 PM
bffo.bsky.social
From @damlaob.bsky.social & colleagues in @narjournal.bsky.social #NARDatabaseIssue | #JASPAR 2026: expansion of transcription factor binding profiles and integration of deep learning models | #Bioinformatics #Genomics #Database #OpenScience #TFBS 🧬 🖥️🧪🔓
⬇️
academic.oup.com/nar/advance-...
JASPAR 2026: expansion of transcription factor binding profiles and integration of deep learning models
Abstract. JASPAR (https://jaspar.elixir.no/) is an open-access database that has provided high-quality, manually curated, and non-redundant DNA binding pro
academic.oup.com
December 2, 2025 at 1:25 PM
bffo.bsky.social
From the @hgnc.bsky.social team in @narjournal.bsky.social #NARDatabaseIssue | Genenames.org : the #HGNC and #PGNC resources in 2026 | #Bioinformatics #Database #OpenScience #Genomics #Proteomics #OpenData 🧬 🖥️🧪🔓
⬇️
academic.oup.com/nar/advance-...
Home | HUGO Gene Nomenclature Committee
Genenames.org
November 26, 2025 at 6:40 PM
toptags.bsky.social
🚀 BlueSky trending hashtags (15m):

#booksky #photography #romancelandia #art #gamedev #nardatabaseissue #tfbs #database #jaspar #genomics #openscience #bioinformatics #christmas #indiedev #wcsj25 #birds #birdphotography #highkey #cardinals #wildlifephotography
December 2, 2025 at 1:30 PM
bffo.bsky.social
From the @narjournal.bsky.social #NARDatabaseIssue | CircTarget: a comprehensive database of circRNA--target RNA interactions across multiple cell types | #Bioinformatics #Database #Genomics #RNA #CircRNA #OpenScience 🧬 🖥️🧪🔓
⬇️
academic.oup.com/nar/advance-...
CircTarget: a comprehensive database of circRNA–target RNA interactions across multiple cell types
Abstract. Circular RNAs (circRNAs) are stable, widespread regulatory molecules produced primarily by back-splicing of pre-mRNAs, with critical roles in gen
academic.oup.com
January 1, 2026 at 4:42 PM
bffo.bsky.social
From the @geneontology.bsky.social team in the @narjournal.bsky.social #NARDatabaseIssue | The Gene Ontology knowledgebase in 2026 | #Bioinformatics #Database #OpenScience #GO #Ontology #GeneOnlology #OpenData 🧬 🖥️🧪🔓
⬇️ academic.oup.com/nar/advance-...
The Gene Ontology knowledgebase in 2026
Abstract. The Gene Ontology (GO) knowledgebase (https://geneontology.org) is a comprehensive resource describing the functions of genes. The GO knowledgeba
academic.oup.com
December 21, 2025 at 12:38 AM
bffo.bsky.social
From Kim Pruitt & team in the @narjournal.bsky.social #NARDatabaseIssue | #Database resources of the National Center for Biotechnology Information in 2026 | #Bioinformatics #OpenScience #Proteomics #Genomics #Education #Research #OpenData #OpenSource #NCBI 🧬 🖥️🧪🔓
⬇️
academic.oup.com/nar/advance-...
Database resources of the National Center for Biotechnology Information in 2026
Abstract. The National Center for Biotechnology Information (NCBI) provides biomedical data resources including PubMed®, a repository of citations and abst
academic.oup.com
December 13, 2025 at 3:54 PM
bffo.bsky.social
From @narjournal.bsky.social #NARDatabaseIssue | MiMeDB 2.0: the Human Microbial Metabolome Database for 2026 | #Bioinformatics #Metabolomics #Database #OpenScience #Human 🧪🔓🇨🇦 CC/ @wishartnode.bsky.social
⬇️
academic.oup.com/nar/advance-...
MiMeDB 2.0: the Human Microbial Metabolome Database for 2026
Abstract. The Microbial Metabolome Database (MiMeDB) (https://mimedb.org) is a comprehensive, freely accessible resource linking human-associated microbes
academic.oup.com
November 24, 2025 at 12:40 AM
bffo.bsky.social
From one of the @ebi.embl.org team, published in @narjournal.bsky.social #NARDatabaseIssue | ChEBI: re-engineered for a sustainable future | #Bioinformatics #Database #Chemistry #OpenData #OpenScience #ChemicalEntitiesofBiologicalInterest 🧬 🖥️🧪🔓
⬇️
academic.oup.com/nar/advance-...
ChEBI: re-engineered for a sustainable future
Abstract. Chemical Entities of Biological Interest (ChEBI) is a high-quality, manually curated, and open-access database and ontology of chemical entities
academic.oup.com
November 29, 2025 at 5:38 PM
bffo.bsky.social
From the @ebi.embl.org team published in the @narjournal.bsky.social #NARDatabaseIssue | The European Nucleotide Archive in 2025 | #Bioinformatics #Database #FAIR #Proteomics #Genomics #OpenScience #OpenData #ENA #INSDC 🧬 🖥️🧪🔓
⬇️
academic.oup.com/nar/advance-...
The European Nucleotide Archive in 2025
Abstract. The European Nucleotide Archive (ENA; https://www.ebi.ac.uk/ena), hosted at the European Molecular Biology Laboratory’s European Bioinformatics I
academic.oup.com
December 4, 2025 at 2:37 PM
bffo.bsky.social
From Sameer Velankar & colleagues in @narjournal.bsky.social #NARDatabaseIssue | PDBe: enhanced structural data exploration to facilitate discovery | #Bioinformatics #Database #OpenScience #Proteomics #PDB 🧬 🖥️🧪🔓
⬇️
academic.oup.com/nar/advance-...
PDBe: enhanced structural data exploration to facilitate discovery
Abstract. Protein Data Bank in Europe (PDBe) is a founding member of the worldwide Protein Data Bank (wwPDB), delivering open access to experimentally dete
academic.oup.com
December 11, 2025 at 3:13 PM
bffo.bsky.social
From the @rnacentral.bsky.social team in the @narjournal.bsky.social #NARDatabaseIssue | RNAcentral in 2026: genes and literature integration | #Bioinformatics #Database #OpenScience #Genomics #RNA #ncRNA 🧬 🖥️🧪🔓
⬇️
academic.oup.com/nar/advance-...
RNAcentral in 2026: genes and literature integration
Abstract. RNAcentral was founded in 2014 to serve as a comprehensive database of non-coding RNA sequences. It began by providing a single unified interface
academic.oup.com
December 19, 2025 at 1:59 AM
bffo.bsky.social
From @sneumann.bsky.social and colleagues in @narjournal.bsky.social #NARDatabaseIssue | MassBank: an open and FAIR mass spectral data resource | #Bioinformatics #Proteomics #OpenScience #FAIR #Database 🧪🔓
⬇️
academic.oup.com/nar/advance-...
MassBank: an open and FAIR mass spectral data resource
Abstract. The open spectral library MassBank (https://massbank.jp/) started in 2006 in Japan, as one of the first open source and open access cross-vendor
academic.oup.com
November 12, 2025 at 3:12 PM
bffo.bsky.social
From @danielrigden.bsky.social & @xosegb.bsky.social in an #Editorial in @narjournal.bsky.social #NARDatabaseIssue | The 2026 Nucleic Acids Research database issue and the online molecular biology database collection | #Bioinformatics #Database #OpenScience 🧬🖥️🧪🔓
⬇️
academic.oup.com/nar/advance-...
The 2026 Nucleic Acids Research database issue and the online molecular biology database collection
Abstract. The 2026 Nucleic Acids Research database issue has 182 papers from across biology and neighbouring fields. Eighty-four of these papers describe n
academic.oup.com
December 24, 2025 at 12:36 PM
bffo.bsky.social
From the @narjournal.bsky.social #NARDatabaseIssue | ProteomeXchange consortium in 2026: making proteomics data #FAIR | #Bioinformatics #Proteomics #OpenScience 🧪🔓
⬇️
academic.oup.com/nar/article/...
The ProteomeXchange consortium in 2026: making proteomics data FAIR
Abstract. The ProteomeXchange consortium of proteomics resources (http://www.proteomexchange.org) was established to standardize open data practices in the
academic.oup.com
November 10, 2025 at 4:21 PM
bffo.bsky.social
From @pmadrigal.bsky.social @anilthanki.bsky.social + friends in @narjournal.bsky.social #NARDatabaseIssue | Expression Atlas in 2026: enabling #FAIR and open expression data through community collaboration and integration | #Bioinformatics #Database #Genomics 🧬🖥️🧪🔓
⬇️
academic.oup.com/nar/advance-...
Expression Atlas in 2026: enabling FAIR and open expression data through community collaboration and integration
Abstract. Expression Atlas (https://www.ebi.ac.uk/gxa/home) is EMBL-EBI’s comprehensive knowledgebase for gene and protein expression across tissues, cell
academic.oup.com
December 11, 2025 at 2:43 PM
bffo.bsky.social
From the @ensembl.org team in the @narjournal.bsky.social #NARDatabaseIssue | Ensembl 2026 | #Bioinformatics #Database #OpenScience #Genomics #37546Genomes #Ensembl 🧬 🖥️🧪🔓 CC/ @ebi.embl.org
⬇️
academic.oup.com/nar/advance-...
Ensembl 2026
Abstract. The Ensembl project (https://www.ensembl.org) is a public and open resource providing access to genomes, annotations, high-quality tools, and met
academic.oup.com
November 27, 2025 at 1:46 PM
bffo.bsky.social
From @narjournal.bsky.social #NARDatabaseIssue | KinaseDB: an integrated multi-omics platform for the human kinome with disease-specific target prioritization | #Bioinformatics #Database #OpenScience | 🧬🖥️🧪🔓
⬇️
doi.org/10.1093/nar/...
KinaseDB: an integrated multi-omics platform for the human kinome with disease-specific target prioritization
Abstract. Protein kinases govern cellular signalling and disease progression and represent major therapeutic targets, yet comprehensive characterization ac
doi.org
September 12, 2026 at 1:22 PM
bffo.bsky.social
From the @narjournal.bsky.social #NARDatabaseIssue | #DDBJ update in 2025: system integration for global data-sharing including #pathogen surveillance | #Bioinformatics #Database #Genomics #OpenScience #OpenData 🧬 🖥️🧪🔓 🇯🇵
⬇️
academic.oup.com/nar/advance-...
DDBJ update in 2025: system integration for global data-sharing including pathogen surveillance
Abstract. The Bioinformation and DNA Data Bank of Japan Center (https://www.ddbj.nig.ac.jp/) continues to serve as a global core infrastructure for biologi
academic.oup.com
November 25, 2025 at 5:05 PM
bffo.bsky.social
From @elliot-bhm.bsky.social & colleagues in @narjournal.bsky.social #NARDatabaseIssue | Virus taxonomy: the database of the International Committee on Taxonomy of Viruses | #Bioinformatics #Database #OpenData #Taxonomy #Proteomics #OpenScience #Genomics 🧬 🖥️🧪🔓
⬇️
academic.oup.com/nar/advance-...
Virus taxonomy: the database of the International Committee on Taxonomy of Viruses
Abstract. Taxonomic classification underlies all biological science and is the basis for comparative analysis of biological organisms and therefore our und
academic.oup.com
November 27, 2025 at 1:21 PM