#nfCore
Empowering bioinformatics communities with Nextflow and nf-core. #nfCore #Nextflow #FAIR #Bioinformatics #GenomeBiology
genomebiology.biomedcentral.com/articles/10....
August 11, 2025 at 2:31 PM
An nf-core framework for the systematic comparison of alternative modeling tools: the multiple sequence alignment case study. #nfCore #ToolsComparison #MSA #NARgenomicsAndBioinformatics #Bioinformatics 🧬 🖥️
academic.oup.com/nargab/artic...
August 11, 2025 at 8:31 AM
Interested in #nfcore #nextflow #pipelines ?

🐛 Need help setting up/debugging a pipeline/run?
🦆 Developing a pipeline and need brainstorming?
🗣️ Join the @nf-co.re weekly helpdesk with community experts!

Today's takes place at 10:00 (Berlin time): nf-co.re/join#gather-...
Gather | Virtual HQ for Remote Teams
Work remotely side-by-side in digital Spaces that make virtual interactions more human.
gather.town
November 21, 2024 at 8:01 AM
Had so much fun on the Nextflow podcast! Great reminiscing about the early days of #nfcore and talking about how we're building the best #protein annotator for #biodiversity at @seanome.bsky.social
Join @ewels.bsky.social as he interviews @olgabot.bsky.social, founder & CEO of @seanome.bsky.social, on today's Nextflow podcast! 🎙️

From MIT to marine genomics, Olga discusses her experience with Nextflow and @nf-co.re, and her vision for ocean research

🎧 Tune in: hubs.la/Q03chXDs0
Finding novel proteins at Seanome, with Olga Botvinnik | The Nextflow Podcast by Seqera
Seqera | The Home for Open Science | From the creators of Nextflow, Wave, and MultiQC
hubs.la
April 9, 2025 at 12:05 AM
If you use #claudeai and develop #nf-core, this is a good set of skills that will save you time: github.com/jonasscheid/... Thanks Jonas Scheid.
GitHub - jonasscheid/claude-nfcore-plugin
Contribute to jonasscheid/claude-nfcore-plugin development by creating an account on GitHub.
github.com
February 27, 2026 at 6:04 PM
Interested in #nfcore #nextflow #pipelines ?

🐛 Need help setting up/debugging a pipeline/run?
🦆 Developing a pipeline and need brainstorming?
🗣️ Join the @nf-co.re weekly helpdesk with community experts!

Last session of 2024 takes place today at 10:00 (Berlin time) on nf-co.re/join#gather-...
Join nf-core
Read about the different ways you can get involved with nf-core
nf-co.re
December 19, 2024 at 7:38 AM
✨ The @nf-co.re library (1400+ reusable modules, 100+ pipelines) makes bioinformatics workflows seamless and FAIR.

Now, you can build a custom library for your organization! Learn how to modularize tools and future-proof your code 👇

hubs.la/Q031dvxx0

#Nextflow #nfcore
Building an nf-core style modules library for your organization | Seqera
If you would like to bring nf-core’s approach to enabling code within your own organization, you can!
hubs.la
January 6, 2025 at 8:06 AM
Interested in #nfcore #nextflow #pipelines?

🐛 Need help setting up/debugging a pipeline/run?
🦆 Developing a pipeline and need brainstorming?
🗣️ Join the @nf-co.re weekly helpdesk with community experts!

First EMEA-APAC session of 2025 today at 10:00 (Berlin time) on nf-co.re/join#gather-town
January 16, 2025 at 8:01 AM
🧑🏾‍💻 Need help with #nfcore #nextflow (#bioinformatics) pipelines, running or developing?

Join our helpdesk!

- 🌍 Eur/M.E./Afr: Thurs. @ 10:00-11:00 CEST (Today!)
- 🌏 Asia-Pacific: Weds. @ 15:00 NZDT
- 🌎 Americas: Tues. @ 14:00 ET

See the nf-core slack and #weekly-helpdesk channel for more details!
September 11, 2025 at 7:03 AM
🧬🖥️ The Sarek pipeline from #nfcore deserves a lot more attention.! Input fastq, bams, crams, vcfs - get a full state-of-the-art analysis. Rare to see such well maintained and flexible software in the open domain, please support:

www.biorxiv.org/content/10.1...
Scalable and efficient DNA sequencing analysis on different compute infrastructures aiding variant d...
bioRxiv - the preprint server for biology, operated by Cold Spring Harbor Laboratory, a research and educational institution
www.biorxiv.org
September 25, 2023 at 10:40 AM
🧑‍💻 Need help with #nfcore #nextflow #bioinformatics pipelines, running or developing?

We are merging the 🌍 Eur/M.E./Afr and the 🌎 Americas weekly helpdesk.

Please join our host @vagkaratzas.bsky.social, nf-core maintainer, this Thursday at 14:30 CET | 08:30 ET on play.workadventu.re/@/nf-core/nf...
November 25, 2025 at 11:07 AM
Nice!

FYI, the abstract page links to github.com/nfcore/marsseq (incorrect). The actual PDF lists github.com/nfcore/marsseq but hyperlinks to the (correct) github.com/nf-core/mars... (with the - in nf-core)
github.com
May 27, 2025 at 8:55 PM
🐉🌹Happy #SantJordi / Feliç Sant Jordi!

Today we celebrate love with roses and books... And we can do it with a touch of code.

Perquè també es pot celebrar Sant Jordi des de la línia de comandes.

▶️ 𝚗𝚎𝚡𝚝𝚏𝚕𝚘𝚠 𝚛𝚞𝚗 𝚌𝚝𝚞𝚗𝚒/𝚜𝚊𝚗𝚝-𝚓𝚘𝚛𝚍𝚒

🔗 github.com/ctuni/sant-j...

#Nextflow #nfcore #bioinformatics
April 23, 2025 at 10:56 AM
Let the #nfcore hackathon begin!
November 28, 2023 at 1:26 PM
We're excited to announce the first release of the #nfcore #rnastructurome pipeline! 🎉 nf-co.re/rnastructuro...

This pipeline provides a standardised workflow for analysing public chemical probing datasets to generate RNA reactivity profiles and predict #RNA secondary structures.
rnastructurome: Introduction
a bioinformatics pipeline for analysing chemical high-throughput RNA structure-probing data
nf-co.re
September 11, 2026 at 10:58 AM
We just released nf-test 0.8.2 🚀. It now calculates md5 hash of .gz files based on file content 💾. Thanks Koen Bossers and the community for your support! Next aim: 100 stars on github ⭐️😊 #nextflow #nfcore
github.com/askimed/nf-t...
Release v0.8.2 · askimed/nf-test
What's Changed Actually skip creating default NextflowConfig by @afaulconbridge in #137 fix typo in docs by @mashehu in #142 Update nextflow_process.md by @sateeshperi in #133 add copy button to c...
github.com
November 30, 2023 at 11:33 AM
Interested in #nfcore #nextflow #pipelines?

🐛 Need help setting up/debugging a pipeline/run?
🦆 Developing a pipeline and need brainstorming?
🗣️ Join the @nf-co.re weekly helpdesk with community experts!

Today's EMEA-APAC begins at 10:00 (Berlin time) on nf-co.re/join#gather-town
February 13, 2025 at 7:57 AM
❓ What do you think about nf-core ❓

🤔 We want your thoughts on the initiative, whether you are a user, developer, newcomer or veteran.

✏️ Fill out this short and anonymous <5min survey to help us guide the community! seqera.typeform.com/2025-nf-core

#bioinformatics #nextflow #nfcore #pipelines
nf-core community survey 2025
This short 8-question survey aims to gauge the current feelings about the nf-core initiative and community. Say what you love and how we can make the community even better!
seqera.typeform.com
February 17, 2025 at 10:49 AM
3 days of coding, collaboration, and open-source science! 💻🧬

We just wrapped the Aussie node of the @nextflow.ai @seqera.io #nfcore Hackathon in Sydney. Our local experts tackled ProteinFold pipelines, built new config tools, and connected with the global community.

Read more 🔗
Strengthening Australia’s Nextflow community through local and global collaboration — Australian BioCommons
The Sydney satellite of the international nf-core Hackathon brought together members of the Nextflow and nf-core community to work collaboratively on a diverse range of projects.
buff.ly
March 31, 2026 at 3:00 AM
🌟 Grateful to our incredible community for a successful 3rd round of the Nextflow and nf-core Mentorship Program! 🚀 Mentors, Mentees, CZI Science - your dedication shines bright. Let's keep pushing the boundaries of bioinformatics and open-source collaboration! 🙌#nextflow #nfcore
October 4, 2023 at 1:28 PM
🧖 Our helpdesk will be open again today at 10:00 CEST (09:00 BST), with nf-core maintainer's team member and module maestro Simon Pearce on-call to help you with anything #nfcore and #nextflow #pipelines!
🧑🏾‍💻 Need help with #nfcore #nextflow (#bioinformatics) pipelines, running or developing?

📅 We host regular helpdesks for different TZs!

- 🌍 Eur/M.E./Afr: Thurs. @ 10:00-11:00 CEST (Today!)
- 🌏 Asia-Pacific: Weds. @ 15:00 NZDT
- 🌎 Americas: Tues. @ 14:00 ET

Join the nf-core slack for more details!
September 25, 2025 at 5:26 AM
Pipeline release! nf-core/quantms v1.2.0 - nfcore/quantms v1.2.0 - Thimphu!

Please see the changelog: https://github.com/nf-core/quantms/releases/tag/1.2.0
November 2, 2023 at 6:25 PM
Need a hand with your #Nextflow or #nfcore pipeline?
Join our weekly drop-in session — every Friday 10–11 CET with Daniel Straub (Uni Tübingen).
Ask questions, get tips, and connect with the community!
📍 Zoom: tinyurl.com/mwz84xvb
#Bioinformatics #OpenScience #NFDI4Microbiota
November 5, 2025 at 8:18 AM
🧑‍💻 Need help with #nfcore #nextflow #bioinformatics pipelines, running or developing?

We are merging the 🌍 Eur/M.E./Afr and the 🌎 Americas weekly helpdesk.

Please join our nf-core maintainers, this Thursday at 14:30 CET | 08:30 ET on play.workadventu.re/@/nf-core/nf...
December 3, 2025 at 5:35 PM
🧑🏾‍💻 Need help with #nfcore #nextflow (#bioinformatics) pipelines, running or developing?

📅 We host regular helpdesks for different TZs!

- 🌍 Eur/M.E./Afr: Thurs. @ 10:00 CEST (Today!)
- 🌏 Asia-Pacific: Weds. @ 15:00 NZDT
- 🌎 Americas: Tues. @ 14:00 ET

Join the nf-co.re slack for more details!
May 15, 2025 at 6:46 AM