🚀 Just launched: GraphBin Visualise (WASM) a browser-based visualisation tool for comparing initial metagenomic binning results vs refined results from GraphBin - all running in your browser, no backend required. (1/n)
#bioinformatics #metagenomics #binning #webapp #pyiodide #webassembly
#bioinformatics #metagenomics #binning #webapp #pyiodide #webassembly
GitHub - metagentools/graphbin-visualise-wasm-app: GraphBin Visualise WebAssembly App
GraphBin Visualise WebAssembly App. Contribute to metagentools/graphbin-visualise-wasm-app development by creating an account on GitHub.
github.com
December 2, 2025 at 1:38 AM
🚀 Just launched: GraphBin Visualise (WASM) a browser-based visualisation tool for comparing initial metagenomic binning results vs refined results from GraphBin - all running in your browser, no backend required. (1/n)
#bioinformatics #metagenomics #binning #webapp #pyiodide #webassembly
#bioinformatics #metagenomics #binning #webapp #pyiodide #webassembly
Ooh, much bigger addressable memory, which I think should make it easier to host live in-browser data science notebooks that do real work with @marimo.io or @jupyter.org and #pyiodide?
WASM 3.0 is released! And guess what gets a mention? @spritelyinst.bsky.social's Hoot! webassembly.org/news/2025-09...
Wasm 3.0 Completed - WebAssembly
WebAssembly (abbreviated Wasm) is a binary instruction format for a stack-based virtual machine. Wasm is designed as a portable compilation target for programming languages, enabling deployment on the...
webassembly.org
September 17, 2025 at 7:59 PM
Ooh, much bigger addressable memory, which I think should make it easier to host live in-browser data science notebooks that do real work with @marimo.io or @jupyter.org and #pyiodide?
By sending code to the Rust playground! Pretty much how mdbook does it, although I'm thinking about adding support for other languages (eg. pyiodide for Python and maybe godbolt for C/C++)
December 24, 2024 at 4:50 PM
By sending code to the Rust playground! Pretty much how mdbook does it, although I'm thinking about adding support for other languages (eg. pyiodide for Python and maybe godbolt for C/C++)
“… sandboxing Python is still a very difficult problem”
Sounds like one of us needs to glue together a Python-wrapped WASM interpreter, Pyiodide, and something that asks intelligently asks and grants permission for WASI calls…
Sounds like one of us needs to glue together a Python-wrapped WASM interpreter, Pyiodide, and something that asks intelligently asks and grants permission for WASI calls…
November 24, 2024 at 6:38 PM
“… sandboxing Python is still a very difficult problem”
Sounds like one of us needs to glue together a Python-wrapped WASM interpreter, Pyiodide, and something that asks intelligently asks and grants permission for WASI calls…
Sounds like one of us needs to glue together a Python-wrapped WASM interpreter, Pyiodide, and something that asks intelligently asks and grants permission for WASI calls…
This new experimental version is more storage efficient and uses compressed WACZ archives, saves ~80% of storage space in some cases github.com/archiveBox/a...
GitHub - ArchiveBox/archivebox-js: </> JS Port of ArchiveBox so that it can run fully in-browser, using modern WACZ + CDX capture based on webrecorder + WASM to run Python plugins in-browser using pyi...
</> JS Port of ArchiveBox so that it can run fully in-browser, using modern WACZ + CDX capture based on webrecorder + WASM to run Python plugins in-browser using pyiodide. Lets us run the ful...
github.com
October 7, 2026 at 8:28 PM
This new experimental version is more storage efficient and uses compressed WACZ archives, saves ~80% of storage space in some cases github.com/archiveBox/a...
haha yeah sorry about using so much disk space! you can try our new "Personas" (aka Configuration Presets) feature to select which plugins you want and save storage space by disabling what you don't need.
GitHub - ArchiveBox/archivebox-js: </> JS Port of ArchiveBox so that it can run fully in-browser, using modern WACZ + CDX capture based on webrecorder + WASM to run Python plugins in-browser using pyi...
</> JS Port of ArchiveBox so that it can run fully in-browser, using modern WACZ + CDX capture based on webrecorder + WASM to run Python plugins in-browser using pyiodide. Lets us run the ful...
github.com
October 7, 2026 at 8:27 PM
haha yeah sorry about using so much disk space! you can try our new "Personas" (aka Configuration Presets) feature to select which plugins you want and save storage space by disabling what you don't need.
The Pyiodide project is a shockingly code way to write Python in the browser. Looking forward to building more with this!
October 30, 2024 at 4:26 PM
The Pyiodide project is a shockingly code way to write Python in the browser. Looking forward to building more with this!
🔗 Try it live: metagentools.github.io/graphbin-vis...
🧬 Upload your binning results + assembly graph files and instantly see before/after plots — your data never leaves your computer. (2/n)
#bioinformatics #metagenomics #binning #webapp #pyiodide #webassembly
🧬 Upload your binning results + assembly graph files and instantly see before/after plots — your data never leaves your computer. (2/n)
#bioinformatics #metagenomics #binning #webapp #pyiodide #webassembly
GraphBin Visualise Wasm App
metagentools.github.io
December 2, 2025 at 1:38 AM
🔗 Try it live: metagentools.github.io/graphbin-vis...
🧬 Upload your binning results + assembly graph files and instantly see before/after plots — your data never leaves your computer. (2/n)
#bioinformatics #metagenomics #binning #webapp #pyiodide #webassembly
🧬 Upload your binning results + assembly graph files and instantly see before/after plots — your data never leaves your computer. (2/n)
#bioinformatics #metagenomics #binning #webapp #pyiodide #webassembly
Announcing py2wasm: A Python to Wasm compiler
wasmer.io/posts/py2was...
Take nuitka, compile python code to C, turn it into web assembly, and you got Python in the browser, 3 times faster than pyiodide
wasmer.io/posts/py2was...
Take nuitka, compile python code to C, turn it into web assembly, and you got Python in the browser, 3 times faster than pyiodide
April 23, 2024 at 9:29 AM
Announcing py2wasm: A Python to Wasm compiler
wasmer.io/posts/py2was...
Take nuitka, compile python code to C, turn it into web assembly, and you got Python in the browser, 3 times faster than pyiodide
wasmer.io/posts/py2was...
Take nuitka, compile python code to C, turn it into web assembly, and you got Python in the browser, 3 times faster than pyiodide
Looks like the new release went up this morning. Lots of good things, but not a radical change. I’m hopeful about the higher order improvements. Thanks for the pyiodide build!
July 17, 2026 at 5:34 PM
Looks like the new release went up this morning. Lots of good things, but not a radical change. I’m hopeful about the higher order improvements. Thanks for the pyiodide build!
Awesome! There was a pyiodide build but it stalled out github.com/Z3Prover/z3/... is this a different approach?
March 20, 2026 at 5:54 PM
Awesome! There was a pyiodide build but it stalled out github.com/Z3Prover/z3/... is this a different approach?
I just published syntaqlite 0.6 (github.com/LalitMaganti...), now supporting SQLite dot commands, a big step forward for usability in the real world. That along with Pyiodide support makes it the most impactful release since 0.1!
Wrote about this at lalitm.com/post/syntaql...
Wrote about this at lalitm.com/post/syntaql...
Release v0.6.0 · LalitMaganti/syntaqlite
Shell file support:
syntaqlite now understands SQLite shell scripts: files that mix .dot commands with SQL. The embedded SQL is extracted and the surrounding shell syntax is ignored, so ast, fmt, ...
github.com
June 17, 2026 at 9:07 PM
I just published syntaqlite 0.6 (github.com/LalitMaganti...), now supporting SQLite dot commands, a big step forward for usability in the real world. That along with Pyiodide support makes it the most impactful release since 0.1!
Wrote about this at lalitm.com/post/syntaql...
Wrote about this at lalitm.com/post/syntaql...