Chao Xiong
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chaoxiong.bsky.social
Chao Xiong
@chaoxiong.bsky.social
Research Fellow/ARC DECRA Fellow at the University of Western Australia. Interested in soil and plant microbiomes, environmental pathogens, and soil health.
ISME20 in Auckland!

It has been a great few days filled with inspiring talks and discussions. It’s been wonderful to catch up with mentors and many old and new friends.

Looking forward to presenting our work this Thursday:

Poster PS3.22.429
🗓 20 August
⏰ 10:00 AM

#ISME20
August 19, 2026 at 9:25 AM
Reposted by Chao Xiong
🌱 Interested in crop microbiomes, plant pathogens, and climate-resilient agriculture?

We are recruiting a PhD student at University of Western Australia to investigate how climate extremes influence crop microbiomes, pathogen invasion, and plant health.

researchdegrees.uwa.edu.au/scholarships...
June 4, 2026 at 6:29 AM
🌱 Interested in crop microbiomes, plant pathogens, and climate-resilient agriculture?

We are recruiting a PhD student at University of Western Australia to investigate how climate extremes influence crop microbiomes, pathogen invasion, and plant health.

researchdegrees.uwa.edu.au/scholarships...
June 4, 2026 at 6:29 AM
Great opportunity to work with an amazing team and explore exciting research topics!!
2 X Scholarships in microbial ecology, soil health and crop disease management are available in our lab @uwanews The University of Western Australia. Both domestic and international candidates can apply

More details & how to apply - visit web-link below
researchdegrees.uwa.edu.au/scholarships...
May 25, 2026 at 11:47 AM
Reposted by Chao Xiong
Featured Article: Unearthing importance of soil microbial diversity

Global atlas & biogeography of human pathogens in soils reveals negative association w/soil microbial diversity. Global pathogen mortality + linked w/soil prevalence
@prof-braj-singh.bsky.social
www.cell.com/cell-host-mi...
Soil microbial diversity associates with lower prevalence of human bacterial pathogens across global soils
Xiong et al. report the most dominant human bacterial pathogens and their environmental drivers in global soils. Many dominant pathogens show negative associations with soil microbial diversity and po...
www.cell.com
May 19, 2026 at 3:18 PM
Reposted by Chao Xiong
Microbial diversity creates a global firewall against pathogens in soil

Bickel & Berg Preview @prof-braj-singh.bsky.social
work revealing human pathogens linked to disease(TB, melioidosis, sepsis) are widespread in agricultural soils w/reduced microbial diversity
www.cell.com/cell-host-mi...
Microbial diversity creates a global firewall against pathogens in soil
Soil is a critical ecological contributor to plant and animal health. In this issue of Cell Host & Microbe, Xiong et al. use global metagenomic data to show that human pathogens linked to diseases lik...
www.cell.com
May 19, 2026 at 3:19 PM
Reposted by Chao Xiong
Thank you Samuel Bickel & Berg Gabriele for highlighting our findings of @cellhostmicrobe article -Microbial diversity creates a global firewall against pathogens in soil. lnkd.in/eQiZd5ST

@global-ecology.bsky.social

Original paper can be found below
www.cell.com/cell-host-mi...
May 17, 2026 at 10:43 AM
Reposted by Chao Xiong
Now officially published in @natureportfolio.nature.com Nature Communications. Here

We provide first global atlas of bacterial plant pathogens and demonstrates that high microbial diversity is associated with decline in plant pathogen prevalence at the globe scale.

www.nature.com/articles/s41...
Dominance and natural suppression of bacterial plant pathogens across global soils - Nature Communications
A global study of 1602 soil samples identifies dominant bacterial plant pathogens and reveals microbial traits, soil carbon and climate that promote natural suppression, while climate change may incre...
www.nature.com
May 14, 2026 at 1:05 PM
Reposted by Chao Xiong
Unearthing importance of soil microbial diversity

Global atlas & biogeography of human bacterial pathogens in soils reveals pathogens negatively associate w/soil microbial diversity. Global mortality assoc. w/pathogens positively linked w/soil prevalence
www.cell.com/cell-host-mi...
Soil microbial diversity associates with lower prevalence of human bacterial pathogens across global soils
Xiong et al. report the most dominant human bacterial pathogens and their environmental drivers in global soils. Many dominant pathogens show negative associations with soil microbial diversity and po...
www.cell.com
April 3, 2026 at 7:42 PM
Reposted by Chao Xiong
Higher soil biodiversity, lower human pathogen prevalence!

Soil is far more than the ground beneath our feet — it is a living system influencing food safety and human disease risk.

Our new paper @cp-cellhostmicrobe.bsky.social

authors.elsevier.com/a/1msNK6t8JE...

www.uwa.edu.au/news/article...
April 1, 2026 at 7:03 AM
Reposted by Chao Xiong
Our new paper in
@cellhostmicrobe

Soil microbial diversity associates with lower prevalence of human bacterial pathogens across global soils
authors.elsevier.com/a/1msNK6t8JE...

Soil biodiversity linked to lower human infectious disease risk
University press release
uwa.edu.au/news/article...
April 1, 2026 at 12:51 PM
Higher soil biodiversity, lower human pathogen prevalence!

Soil is far more than the ground beneath our feet — it is a living system influencing food safety and human disease risk.

Our new paper @cp-cellhostmicrobe.bsky.social

authors.elsevier.com/a/1msNK6t8JE...

www.uwa.edu.au/news/article...
April 1, 2026 at 7:03 AM
Reposted by Chao Xiong
Our new paper in @cp-cellhostmicrobe.bsky.social includes
1. Global atlas of human pathogens in soils
2. Soil biodiversity negatively linked with human pathogens
3. Many pathogens to increase in future climates
4. Positive link between pathogens & mortality
authors.elsevier.com/a/1msNK6t8JE...
March 31, 2026 at 3:18 PM
Reposted by Chao Xiong
“Climate scientists at World Weather Attribution published an analysis Friday that found this heat wave would be ‘virtually impossible for this time of year in a world without human-induced climate change.’”
The US is on the verge of an all-time heat record for March. Yes, it’s climate change. | CNN
The impending US heat record is an alarming signal of how hot the planet is getting and how fast it’s happening.
www.cnn.com
March 20, 2026 at 7:22 PM
Reposted by Chao Xiong
🌎🧪
Heatwaves. Droughts. Floods. As climate extremes become more frequent, they may be silently increasing the risk of plant disease outbreaks by reshaping plant pathogens, beneficial microbiomes and host immunity. Check out our latest Review in dlvr.it/TRR2wT
March 20, 2026 at 1:14 PM
Heatwaves. Droughts. Floods. As climate extremes become more frequent, they may be silently increasing the risk of plant disease outbreaks by reshaping plant pathogens, beneficial microbiomes and host immunity. Check out our latest Review in dlvr.it/TRR2wT
March 19, 2026 at 11:49 PM
Reposted by Chao Xiong
Eco-evolutionary dynamics sustain a potent yet rare antibiotic gene cluster in Streptomyces

-in #ISMEJournal

academic.oup.com/ismej/advanc...
Eco-evolutionary dynamics sustain a potent yet rare antibiotic gene cluster in Streptomyces
Abstract. Microbial secondary metabolites have been recognized and utilized for nearly a century. Nevertheless, the eco-evolutionary mechanisms governing t
academic.oup.com
March 18, 2026 at 12:50 PM
Reposted by Chao Xiong
Climate extremes are changing the rules of plant disease.
A must‑read review on pathogens, microbiomes and plant health in a warming world:
www.nature.com/articles/s41... [nature.com]
Impacts of climate extremes on plant pathogens, microbiomes and plant health - Nature Reviews Microbiology
In this Review, Singh and colleagues discuss the impacts of key climate extremes on soil-borne pathogens, plant microbiomes and host physiology that ultimately determine disease outcomes, as well as t...
www.nature.com
March 18, 2026 at 1:04 AM
Reposted by Chao Xiong
In @natrevmicro.nature.com , we examine
1. climate extreme impacts on plant pathogens, microbiomes, host physiology & disease outcomes
2. different responses of pathosystems to extreme from climate change
3. integrated pathway to support climate-resilient ecosystems

www.nature.com/articles/s41...
March 17, 2026 at 4:27 AM
Reposted by Chao Xiong
Great review from @prof-braj-singh.bsky.social -> Impacts of climate extremes on plant pathogens, microbiomes and plant health | Nature Reviews Microbiology
Impacts of climate extremes on plant pathogens, microbiomes and plant health | Nature Reviews Microbiology
Plant diseases pose a great risk to global food security, and recent research indicates that pathogen pressures on plant productivity will substantially increase under ongoing climate change (that is, increasing CO2 levels and global warming). However, our mechanistic and predictive knowledge of the impacts of climate extremes, such as heatwaves and prolonged droughts, and their interaction with other climatic factors, on plant pathogens, hosts and microbiomes, remains largely unknown. This is an important knowledge gap that limits our ability to develop effective strategies to mitigate the socioeconomic impacts of climate change-induced plant disease outbreaks. This Review examines the impacts of key climate extremes on soil-borne pathogens, plant microbiomes and host physiology that ultimately determine disease outcomes. We explore evidence that suggests that the responses of pathogen–host–microbiome interactions to climate extremes may differ in many ways from those to long-term climate change. Climate extremes may increase the virulence and distribution of many pathogens, suppress certain plant immune responses, and weaken the core functions of host microbiomes within the disease triangle, thereby facilitating disease outbreaks. We propose an integrated pathway for harnessing microbiomes to address the critical challenges posed by climate extremes. These insights offer new approaches to mitigate disease risks by harnessing microbiomes and metabolites under climate extremes, with the potential to support climate-resilient and sustainable agricultural and natural ecosystems.
sco.lt
March 14, 2026 at 11:03 PM
Reposted by Chao Xiong
Thank you @jeanmichelane.bsky.social for your kind words. We hope this article will prompt new line of research.
Great review from @prof-braj-singh.bsky.social -> Impacts of climate extremes on plant pathogens, microbiomes and plant health | Nature Reviews Microbiology
Impacts of climate extremes on plant pathogens, microbiomes and plant health | Nature Reviews Microbiology
Plant diseases pose a great risk to global food security, and recent research indicates that pathogen pressures on plant productivity will substantially increase under ongoing climate change (that is, increasing CO2 levels and global warming). However, our mechanistic and predictive knowledge of the impacts of climate extremes, such as heatwaves and prolonged droughts, and their interaction with other climatic factors, on plant pathogens, hosts and microbiomes, remains largely unknown. This is an important knowledge gap that limits our ability to develop effective strategies to mitigate the socioeconomic impacts of climate change-induced plant disease outbreaks. This Review examines the impacts of key climate extremes on soil-borne pathogens, plant microbiomes and host physiology that ultimately determine disease outcomes. We explore evidence that suggests that the responses of pathogen–host–microbiome interactions to climate extremes may differ in many ways from those to long-term climate change. Climate extremes may increase the virulence and distribution of many pathogens, suppress certain plant immune responses, and weaken the core functions of host microbiomes within the disease triangle, thereby facilitating disease outbreaks. We propose an integrated pathway for harnessing microbiomes to address the critical challenges posed by climate extremes. These insights offer new approaches to mitigate disease risks by harnessing microbiomes and metabolites under climate extremes, with the potential to support climate-resilient and sustainable agricultural and natural ecosystems.
sco.lt
March 16, 2026 at 5:29 AM
Reposted by Chao Xiong
In a new paper in Nature Communications
- we
1. provide first global map of dominant bacterial plant pathogens
2. show microbial diversity, SOC, some Streptomyces, AM fungi linked to low pathogen prevalence
3. Many pathogens to increase under future climates

www.nature.com/articles/s41...
March 16, 2026 at 5:34 AM