Cansu Dinçer
@cansudincer.bsky.social
Postdoc at University of Oxford-WIMM @imm.ox.ac.uk
Computational Biologist #cancer
Computational Biologist #cancer
Reposted by Cansu Dinçer
Excited to see BEstimate out -
a computational tool for base editing guide RNA design for screening, disease modelling and correction of pathogenic variants.
It's SNP-aware, so you can parse non-reference genomes, and reports off-target sites.
paper:
link.springer.com/article/10.1...
a computational tool for base editing guide RNA design for screening, disease modelling and correction of pathogenic variants.
It's SNP-aware, so you can parse non-reference genomes, and reports off-target sites.
paper:
link.springer.com/article/10.1...
BEstimate: a computational tool for the design and interpretation of CRISPR base editing experiments - Genome Biology
CRISPR base editors enable scalable targeted DNA mutagenesis and are a powerful tool for analysing the function of variants of uncertain significance and disease modelling. Existing guide RNA (gRNA) d...
link.springer.com
May 6, 2026 at 7:15 PM
Excited to see BEstimate out -
a computational tool for base editing guide RNA design for screening, disease modelling and correction of pathogenic variants.
It's SNP-aware, so you can parse non-reference genomes, and reports off-target sites.
paper:
link.springer.com/article/10.1...
a computational tool for base editing guide RNA design for screening, disease modelling and correction of pathogenic variants.
It's SNP-aware, so you can parse non-reference genomes, and reports off-target sites.
paper:
link.springer.com/article/10.1...
🚨Moving from Cambridge to Oxford!
After my PhD at the Wellcome Sanger Institute and @mgarnett.bsky.social lab, I’m leaving Cambridge -my second home- to start as a Postdoc at Oxford-WIMM in Sumana Sharma’s group! Grateful for the journey so far and excited for what’s ahead! 🎉
After my PhD at the Wellcome Sanger Institute and @mgarnett.bsky.social lab, I’m leaving Cambridge -my second home- to start as a Postdoc at Oxford-WIMM in Sumana Sharma’s group! Grateful for the journey so far and excited for what’s ahead! 🎉
August 4, 2025 at 3:12 PM
🚨Moving from Cambridge to Oxford!
After my PhD at the Wellcome Sanger Institute and @mgarnett.bsky.social lab, I’m leaving Cambridge -my second home- to start as a Postdoc at Oxford-WIMM in Sumana Sharma’s group! Grateful for the journey so far and excited for what’s ahead! 🎉
After my PhD at the Wellcome Sanger Institute and @mgarnett.bsky.social lab, I’m leaving Cambridge -my second home- to start as a Postdoc at Oxford-WIMM in Sumana Sharma’s group! Grateful for the journey so far and excited for what’s ahead! 🎉
🚨 Excited to share our latest preprint!
@mgarnett.bsky.social @mattcoelho.bsky.social
We introduce BEstimate, a flexible, comprehensive tool for designing and interpreting CRISPR-based editing experiments.
#CRISPR #BEstimate #BaseEditor
@mgarnett.bsky.social @mattcoelho.bsky.social
We introduce BEstimate, a flexible, comprehensive tool for designing and interpreting CRISPR-based editing experiments.
#CRISPR #BEstimate #BaseEditor
BEstimate: a computational tool for the design and interpretation of CRISPR base editing experiments https://www.biorxiv.org/content/10.1101/2025.05.19.654892v1
May 22, 2025 at 1:21 PM
🚨 Excited to share our latest preprint!
@mgarnett.bsky.social @mattcoelho.bsky.social
We introduce BEstimate, a flexible, comprehensive tool for designing and interpreting CRISPR-based editing experiments.
#CRISPR #BEstimate #BaseEditor
@mgarnett.bsky.social @mattcoelho.bsky.social
We introduce BEstimate, a flexible, comprehensive tool for designing and interpreting CRISPR-based editing experiments.
#CRISPR #BEstimate #BaseEditor
I'm incredibly grateful to have been selected as one of the best talks at the Downing College Postgraduate Conference 2025, an honour I shared with brilliant Ms Herrick-Doyle, from Oxford, Lincoln College, whose presentation was truly inspiring.
@downingcollege.bsky.social
@downingcollege.bsky.social
May 13, 2025 at 2:59 PM
I'm incredibly grateful to have been selected as one of the best talks at the Downing College Postgraduate Conference 2025, an honour I shared with brilliant Ms Herrick-Doyle, from Oxford, Lincoln College, whose presentation was truly inspiring.
@downingcollege.bsky.social
@downingcollege.bsky.social
Glad to share one of the happiest moment in my life. I’d like to thank my dear supervisor @mgarnett.bsky.social for his incredible support, encouragement and guidance, and all the Garnett team for their friendship. I am extremely grateful for this remarkable journey 🥂
#phdone
#phdone
Congratulations to @cansudincer.bsky.social on successfully completing her PhD viva today.
December 13, 2024 at 11:45 AM
Glad to share one of the happiest moment in my life. I’d like to thank my dear supervisor @mgarnett.bsky.social for his incredible support, encouragement and guidance, and all the Garnett team for their friendship. I am extremely grateful for this remarkable journey 🥂
#phdone
#phdone