ssolo.bsky.social
@ssolo.bsky.social
Physicist turned Evolutionary Biologist, Model-Based Evolutionary Genomics Research Unit @oistedu.bsky.social phylogenomics, HGT, somatic evolution (http://ssolo.bsky.social)
lead by Anzhelika together with @tweethinking.bsky.social @xrefugee13.bsky.social @benjwoodcroft.bsky.social @anja1.bsky.social and others..
July 4, 2026 at 6:33 AM
lead by Anzhelika together with @tweethinking.bsky.social @xrefugee13.bsky.social @benjwoodcroft.bsky.social @anja1.bsky.social and others..
Reposted by ssolo.bsky.social
Why? Because ELM was optimized by ML for use with C60 on a large pan-eukaryotic data set and fits much better than LG. See this paper: academic.oup.com/mbe/article/... /2
GTRpmix: A Linked General Time-Reversible Model for Profile Mixture Models
Abstract. Profile mixture models capture distinct biochemical constraints on the amino acid substitution process at different sites in proteins. These mode
academic.oup.com
December 9, 2025 at 6:30 PM
Why? Because ELM was optimized by ML for use with C60 on a large pan-eukaryotic data set and fits much better than LG. See this paper: academic.oup.com/mbe/article/... /2
Reposted by ssolo.bsky.social
Read the study here, which featured researchers from OIST, @bristoluni.bsky.social, @niozsearesearch.bsky.social and @uniofbath.bsky.social 👇https://www.nature.com/articles/s41586-025-09808-z
Dated gene duplications elucidate the evolutionary assembly of eukaryotes - Nature
Analysis of eukaryotic gene sequences using a relaxed molecular clock methodology indicate that eukaryotes emerged 3.0–2.25 billion years ago as a result of mitochondrial endosymbiosis with complex archaea that already possessed an elaborated cytoskeleton, membrane trafficking, endomembrane, phagocytotic machinery and a nucleus.
www.nature.com
December 4, 2025 at 7:37 AM
Read the study here, which featured researchers from OIST, @bristoluni.bsky.social, @niozsearesearch.bsky.social and @uniofbath.bsky.social 👇https://www.nature.com/articles/s41586-025-09808-z