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#matchms #proudpi #compmetabolomics #metabolomics #bioinformatics | Justin J.J. van der Hooft

October 30, 2026 at 4:06 PM

Justin J.J. van der Hooft

@jjjvanderhooft.bsky.social

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Great news Laura Rosina Torres Ortega and many congratulations on this achievement 👏 🎉 - it was not the first time you tried to obtain financial support to extend your skillset and solidify a software...

#specreboot #naturalproducts #discovery #community #proudpi #compmetabolomics #multiomics #metabolomics #goats #bioinformatics | Justin J.J. van der Hooft

October 23, 2026 at 8:24 PM

Justin J.J. van der Hooft

@jjjvanderhooft.bsky.social

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Thanks Esteban Charria Girón for all your contributions to the Bioinformatics Group. It has been a privilege to supervise and mentor you with Marnix Medema and to see you growing as a scientist and p...

The Evolving Bileome: A Pan-Repository Landscape of Expanded Bile Acid and Related Steroidal Signatures | Esteban Charria Girón

October 23, 2026 at 8:52 PM

Justin J.J. van der Hooft

@jjjvanderhooft.bsky.social

lnkd.in/p/eKtC_eWc #ProudPI in #CompMetabolomics and #MultiOmics 😎

Some more news from the SpecReBoot team! 🔁 After releasing our SpecReBoot preprint, one big question remained: Could our framework handle much larger datasets? Were we ready for repository-scale anal...

#compmetabolomics #metabolomics #teamwork #ms2lda #specreboot #bioinformatics | Justin J.J. van der Hooft

October 23, 2026 at 8:14 PM

Justin J.J. van der Hooft

@jjjvanderhooft.bsky.social

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Thanks to all participants of the Utrecht Bioinformatics Center Symposium today! 😎 It was my pleasure to highlight in my keynote how (the power of) collaboration enabled the creation of innovative me...

#community #keynote #team #wageningen #ms2deepscore #specreboot #ms2lda #metabolomics #compmetabolomics #networking #annotation #omics #mining #bioinformatics | Justin J.J. van der Hooft

October 2, 2026 at 4:14 PM

Justin J.J. van der Hooft

@jjjvanderhooft.bsky.social

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Many thanks to Daniel Globisch & Ingela Lanekoff for inviting me to Uppsala University to connect with the Nordic Metabolomics Society #community and deliver a #keynote on scalable and explainable omi...

NWO funding for research into biochemical alternatives | Justin J.J. van der Hooft

September 30, 2026 at 7:37 PM

Justin J.J. van der Hooft

@jjjvanderhooft.bsky.social

Enjoyable morning walk through the old university town of Uppsala, Sweden 😎 Now the 5th Nordic Metabolomics Conference started with the plenary of Oliver Fiehn #NMetC2026 #metabolomics #CompMetabolomics #community

September 28, 2026 at 8:22 AM

Justin J.J. van der Hooft

@jjjvanderhooft.bsky.social

#TERRAPATH #CompGenomics #CompMetabolomics #MultiOmics #ProudPI 😎

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Proud, excited, and honoured that our TERRAPATH KIC Biochemical Diversity Consortium Grant got funded by NWO (Dutch Research Council) 😎 Ever since I was a small boy, I have been fascinated by how l...

#teamwork #metabolomics #massspectrometry #ms2query #specreboot #networks #microbiology #microbiome #consortia #organoids #proudpi #compmetabolomics #bioinformatics | Justin J.J. van der Hooft

September 18, 2026 at 1:12 PM

Justin J.J. van der Hooft

@jjjvanderhooft.bsky.social

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🚨 New Preprint Alert 🚨 Many congrats 👏 🎉 to Larissa Della Vedova for posting her PhenoReWire preprint online! 😎 Are you working with microbiomes or microbial consortia? It is commonly known that sm...

#plantmetwiki #opensource #plantmetwiki #proudpi #compmetabolomics #plant #biosynthesis #pathways #naturalproducts #discovery #multiomics #bioinformatics | Justin J.J. van der Hooft

September 1, 2026 at 7:59 AM

Justin J.J. van der Hooft

@jjjvanderhooft.bsky.social

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🚨 New Preprint Alert 🚨 A great effort led by Elena Del Pup 🙌 Doing plant research with omics data? Curious to find plant biosynthesis pathways? Do have a look at our new knowledge graph based resou...

August 27, 2026 at 5:41 AM

Justin J.J. van der Hooft

@jjjvanderhooft.bsky.social

#open #artemis #proudpi #compmetabolomics #metabolomics #massspectrometry #molecular #networking #settings #naturalproducts #discovery #bioinformatics | Justin J.J. van der Hooft

🚨 New Preprint Alert 🚨 A great effort led by Laura Rosina Torres Ortega 🙌 With thanks to Esteban Charria Girón for his great contributions 😎 Creating molecular networks to guide your biochemical a...

#icms2026 #phenorewire #proudpi #compmetabolomics #metabolomics #microbiology #community | Justin J.J. van der Hooft

August 27, 2026 at 5:46 AM

Justin J.J. van der Hooft

@jjjvanderhooft.bsky.social

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Great efforts by Larissa Della Vedova in teaching in the short courses during #ICMS2026 🙌 If you are around in Lyon these days, don't forget to visit her poster on #PhenoReWire - what it is and does...

SpecReBoot Library Matching Preprint | Justin J.J. van der Hooft

August 23, 2026 at 5:51 PM

Justin J.J. van der Hooft

@jjjvanderhooft.bsky.social

#Teamwork #ProudPI in #CompMetabolomics 😎

Doing untargeted mass spectrometry-based #metabolomics?

Want to boost your chances in correctly matching your mass spectra to library spectra?

Give our new #SpecReBoot resampling strategy a try! 🙂

www.linkedin.com/posts/jjjvan...

🚨 New Preprint Alert 🚨 Congratulations 👏 🎉 to the CompMet team for presenting this preprint on boosting library matching for untargeted mass spectrometry-based metabolomics workflows 🙌 Metabolite a...

August 1, 2026 at 8:27 AM

Justin J.J. van der Hooft

@jjjvanderhooft.bsky.social

🚨 New Paper 📜 Alert 🚨

#ProudPI in #CompMetabolomics
#teamwork #collaboration #substructure
#MS2LDA #metabolomics #MassQL #MolNetEnhancer #goats 🐐

www.linkedin.com/posts/jjjvan...

July 10, 2026 at 7:10 PM

Justin J.J. van der Hooft

@jjjvanderhooft.bsky.social

#proudpi #compmetabolomics #metabolomics #fungi #naturalproducts #discovery #bioinformatics | Justin J.J. van der Hooft

Great recognition of Esteban Charria Girón's PhD thesis work! 🙌 His drive to explore fungal biosynthetic and chemical diversity combined with his creativity make him a well-deserved recipient of this ...

June 12, 2026 at 8:36 PM

Justin J.J. van der Hooft

@jjjvanderhooft.bsky.social

#dortmund #ms2deepscore #specreboot #ms2lda #fermo #specreboot #metabolomics #compmetabolomics #wageningen #bioinformatics | Justin J.J. van der Hooft

Many thanks Sven Heiles for the kind invitation to come to #Dortmund Leibniz-Institut für Analytische Wissenschaften – ISAS – e.V. to discuss metabolomics and multiomics strategies to better understan...

June 11, 2026 at 4:52 PM

Justin J.J. van der Hooft

@jjjvanderhooft.bsky.social

#fermo #compmetabolomics #metabolomics #naturalproducts #discovery #feature #prioritization #bioactivity #phenotypes #datascience #integration #samplegroups #molecularnetworking #librarymatching… | Ju...

🚨 New Paper Alert 🚨 Very proud of previous team member Mitja Zdouc, PhD on the completion of our #FERMO paper in ACS Measurement Science Au! Have a look at Mitja's post to find out all about FERMO...

June 1, 2026 at 10:16 AM

Justin J.J. van der Hooft

@jjjvanderhooft.bsky.social

#fermo #specreboot #wageningen #teamwork #metsoc2026 #compmetabolomics #metabolomics #molecularnetworking #fungi #pathogen #fermo #specreboot #teamwork #goats #bioinformatics | Justin J.J. van der Hoo...

Goodbye 👋 Paula Derksen Macruz and mucho obrigado for your great contributions and your drive to learn many tools including #FERMO and #SpecReBoot during your six months' stay here with the CompMet Gr...

May 29, 2026 at 3:59 PM

Justin J.J. van der Hooft

@jjjvanderhooft.bsky.social

#microbiome #microbes #omics #holomicrobiome #metabolomics #compmetabolomics #bioinformatics | Justin J.J. van der Hooft

This morning I had the opportunity to attend the official launch of the Holomicrobiome Institute in a special location: the planetarium in Artis, Amsterdam! 😎 Seeing things from a different perspecti...

#wageningen #teamwork #compmetabolomics #metabolomics #molecularnetworking #librarymatching #drugs #monitoring #specreboot #teamwork #goats #bioinformatics | Justin J.J. van der Hooft

May 27, 2026 at 12:37 PM

Justin J.J. van der Hooft

@jjjvanderhooft.bsky.social

#ProudPI in #CompMetabolomics 😎

www.linkedin.com/posts/jjjvan...

Goodbye 👋 Elena Ferri and grazie mille for your great contributions and your enthusiasm during your three months' stay here with the CompMet Group! Good luck with all your future metabolomics puzzles ...

May 22, 2026 at 1:11 PM

Justin J.J. van der Hooft

@jjjvanderhooft.bsky.social

#eusm2026 #leiden #metabolomics #computational #compmetabolomics #experimental #design #fermo #bioinformatics | Justin J.J. van der Hooft

Thanks to the European School of Metabolomics #EUSM2026 organizers for pulling off a fabulous week full of good science, good food, and above all, good people. It is incredible that more than 70(!) ...

May 8, 2026 at 4:09 PM

Justin J.J. van der Hooft

@jjjvanderhooft.bsky.social

#molecularnetworking #ms2lda #ms2query #cannabis #plant #metabolomics #proudpi #compmetabolomics #interdisciplinery #team #fair #science #bioinformatics | Justin J.J. van der Hooft

🚨 New Preprint Alarm 🚨 Many congratulations 👏 🎉 to Willy Contreras-Avilés, PhD(c), MPS, MBS & Laura Rosina Torres Ortega for completing this joint PhD thesis chapter that leverages their complementar...

May 7, 2026 at 10:02 AM

Justin J.J. van der Hooft

@jjjvanderhooft.bsky.social

Arrived in Katwijk aan Zee for the EUSM 2026 - European School of Metabolomics 😎
#metabolomics #CompMetabolomics
#community #chromatography #massspectrometry #NMR

May 4, 2026 at 3:23 PM

Justin J.J. van der Hooft

@jjjvanderhooft.bsky.social

#wageningen #dagstuhl #proudpi #compmetabolomics #metabolomics #bioinformatics | Justin J.J. van der Hooft

Getting closer to #Wageningen after an inspiring #Dagstuhl Computational Metabolomics seminar! 😎 It was a week full of agents that churn, marinate, vibe, and what is more, benchmarks, substructures, ...