#GalaxyProject
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Eight contributors, one day, and a pile of outdated metagenomics tools — here is what the October 14th microGalaxy hackathon achieved!
https://galaxyproject.org/news/2026-10-19-microgalaxy-hackathon-outcomes/

##UseGalaxy ##GalaxyProject ##EOSC
One Day, Many Tool Updates: microGalaxy Hackathon Recap
Eight contributors, one day, and a pile of outdated metagenomics tools — here is what the October 14th microGalaxy hackathon achieved!
galaxyproject.org
October 28, 2026 at 11:39 PM
galaxyproject.bsky.social
Galaxy's integration of BioImage.IO AI models, an example of good practice in AI-enabled science
https://galaxyproject.org/news/2026-10-21-raise-registry/

##UseGalaxy ##GalaxyProject ##EOSC
Fluorescence microscopy image of cell nuclei with red segmentation contours drawn by the BioImage.IO NucleiSegmentationBoundaryModel in Galaxy. Landsat satellite image of Arctic thermokarst ponds with 152 water bodies outlined in red by the same nuclei segmentation model, applied without retraining.
October 29, 2026 at 10:16 PM
galaxyproject.bsky.social
The miaDash Shiny app from the Bioconductor microbiome team is now an interactive tool on usegalaxy.eu: import, analyse and visualise microbiome data without writing a line of code.
https://galaxyproject.org/news/2026-10-21-miadash-interactive-tool/

##UseGalaxy ##GalaxyProject ##Microbiome ##miaDash
The miaDash logo DADA2, mothur, QIIME 2, LotuS2, Kraken2 with Bracken, MetaPhlAn, HUMAnN and FAIRyMAGs feed prepared tables into miaDash. Output panels include abundance barplots, heatmaps, ordination, scree and loading plots, trees, networks, scatter plots and boxplots, alongside data exports to Galaxy. The iSEE explorer launched from miaDash, showing the interactive panels
October 28, 2026 at 5:43 PM
galaxyproject.bsky.social
A Galaxy-centric report from the EOSC symposium in Florence.
https://galaxyproject.org/news/2026-10-20-eosc-symposium-2026/

##UseGalaxy ##GalaxyProject
Galaxy as a use case at the EOSC Node Germany booth: the booth's table features wooden toy train tracks in the "infinity" shape and colors of the EOSC logo. The train has come to a stop at the "Galaxy" station. There are also various Galaxy stickers and pins distributed on the table. Wolfgang at the stage of the auditorium of the Palazzo dei Congressi presenting a slide showing a complex Galaxy workflow invocation titled: "Relax and let Galaxy's workflow engine do the hard work for you"
October 28, 2026 at 9:02 PM
galaxyproject.bsky.social
EOSC-MESH kickoff meeting in Ghent: Galaxy helps extend the European Open Science Cloud!
https://galaxyproject.org/news/2026-10-20-eosc-mesh-kickoff/

##UseGalaxy ##GalaxyProject
EOSC-MESH kickoff meeting group photo
October 21, 2026 at 2:14 PM
galaxyproject.bsky.social
48 hours, ocean data and fresh ideas! Galaxy Europe's Earth System Sciences platform joins the Ocean Hackathon adventure.
https://galaxyproject.org/news/2026-10-13-gess-for-ocean-hackathon/

##UseGalaxy ##GalaxyProject ##EOSC
Ocean Hackathon 2026 Galaxy for Earth System Sciences Example of a marine data analysis workflow using Galaxy Europe
October 15, 2026 at 5:56 PM
galaxyproject.bsky.social
and analyze your own LC-MS, GC-MS or NMR data through tutoring sessions.

📍 Rennes, France
📅 5 April 2027
🔗 More info & registration: https://training.galaxyproject.org/training-material/events/2027-04-05-workflow4experimenters-2027.html

##UseGalaxy ##GalaxyProject ##EOSC (2/2)
Workflow4Experimenters 2027
Analyze your data with Galaxy and the Workflow4Metabolomics infrastructure! During this one-week-long on-site course (preceded by half-a-week of webinars), you will learn how to use the W4M-promoted Galaxy tools for metabolomics, and analyze your own LC-MS, GC-MS or NMR data through tutoring sessions.
training.galaxyproject.org
October 14, 2026 at 1:19 PM
galaxyproject.bsky.social
#GalaxyProject ##EOSC (2/2)
October 12, 2026 at 6:17 PM
galaxyproject.bsky.social
Efficient start of the ESG4Stars project with kick-off meeting, general assembly and first collaborative working days all in one week
https://galaxyproject.org/news/2026-10-12-esg4stars-kicked-off/

##UseGalaxy ##GalaxyProject
Opening presentation of the kick-off meeting Group photo of participants taken in front of the main building of the Faculty of Engineering at the University of Freiburg on the very sunny October afternoon of day 1 The five high-level objectives of ESG4Stars: track smarter, transfer less, store less, compute less and drive change printed in the style of an energy label together with short catch phrases - Make energy use visible, measurable and FAIR; Move only the necessary data; Optimise storage footprints with storage classes and modern file formats; Reduce redundant processing and allocate right-sized resources; Raise awareness and drive adoption into European research infrastructures - explaining each objective
October 13, 2026 at 4:12 PM
galaxyproject.bsky.social
Circumvent context window limits of LLMs by splitting long texts into manageable chunks
https://galaxyproject.org/news/2026-10-02-langchain-text-splitters/

##UseGalaxy ##GalaxyProject ##EOSC
Demo of LangChain Text Splitters in Galaxy
October 7, 2026 at 4:11 PM
galaxyproject.bsky.social
Across 160 bioinformatics tasks, agents using Galaxy achieved accuracy comparable to agents writing custom code.
https://galaxyproject.org/news/2026-09-21-ai-agents-benchmark/

##UseGalaxy ##GalaxyProject
Local image
October 4, 2026 at 7:41 PM
galaxyproject.bsky.social
📣 Introduction to the Data Analysis Platform Galaxy (in German)

📍 Freiburg, Germany
📅 2 December 2026
🔗 More info & registration: https://galaxyproject.org/events/2026-12-02-ub-cl/

##UseGalaxy ##GalaxyProject ##EOSC ##EuroScienceGateway
Introduction to the Data Analysis Platform Galaxy (in German)
Galaxy Community Hub
galaxyproject.org
September 17, 2026 at 8:39 PM
galaxyproject.bsky.social
The Image Analysis in Galaxy community is happy to share the first publication on bioimage data analysis, management and community practices in Galaxy
https://galaxyproject.org/news/2026-09-16-bioimagingpub-jm/

##UseGalaxy ##GalaxyProject ##EOSC
Galaxy single-cell and spatial omics graphical abstract
September 17, 2026 at 4:45 PM
galaxyproject.bsky.social
At IUSSI 2026 in Freiburg, Mina Hojat Ansari presented how reproducible, multi-layer metagenomic analysis in Galaxy helps investigate termite gut microbiome recovery after molting.
https://galaxyproject.org/news/2026-09-08-galaxy-iussi/

##UseGalaxy ##GalaxyProject ##EOSC
Group photograph of participants at the 20th International Congress of IUSSI in Freiburg Title slide of Mina Hojat Ansari’s IUSSI 2026 presentation on termite gut microbiome reassembly using Galaxy
September 10, 2026 at 6:25 PM
galaxyproject.bsky.social
Galaxy Training Academy 2026 brought together more than 2,200 registrations from 108 countries for a free, global week of self-paced Galaxy training across 11 tracks.
https://galaxyproject.org/news/2026-09-08-gta2026-recap/

##UseGalaxy ##GalaxyProject ##EOSC
Global distribution of registrations for Galaxy Training Academy 2026 Galaxy Training Academy 2026 Meet the Experts schedule
September 9, 2026 at 3:33 PM
galaxyproject.bsky.social
The latest Galaxy newsletter is here! 📰✨

Catch up on Galaxy 26.1, Galaxy Labs, UseGalaxy Canada, research and training highlights, community news, jobs, and upcoming events across the Galaxy ecosystem.

galaxyproject.org/news/2026-09...

#usegalaxy #GalaxyProject
Galaxy Newsletter September 2026
Explore Galaxy 26.1 and Galaxy Labs, welcome UseGalaxy Canada, see how Galaxy Australia is simplifying data movement, discover Galaxy-powered wildlife ecology and public-health workflows, and find job...
galaxyproject.org
September 9, 2026 at 1:15 PM
galaxyproject.bsky.social
Only a handful of spots remain for the 2nd Galaxy Tool Development Workshop in Freiburg (7-9 October 2026). Registration closes on 11 September, and remote participation is available.
https://galaxyproject.org/news/2026-09-09-tool-dev-workshop/

##UseGalaxy ##GalaxyProject ##EOSC
Last Few Spots left - Galaxy Tool Development Workshop, Registration Closes 14 September
Only a handful of spots remain for the 2nd Galaxy Tool Development Workshop in Freiburg (7-9 October 2026). Registration closes on 11 September, and remote participation is available.
galaxyproject.org
September 9, 2026 at 3:30 PM
galaxyproject.bsky.social
Welcome, UseGalaxy Canada! 🇨🇦
UseGalaxy.ca is now part of the UseGalaxy.* family, expanding access to free, powerful, reproducible Galaxy infrastructure for researchers in Canada and beyond.

Explore: usegalaxy.ca

#usegalaxy #GalaxyProject #OpenScience
Galaxy
Galaxy is a community-driven web-based analysis platform for life science research.
UseGalaxy.ca
September 3, 2026 at 1:14 PM
galaxyproject.bsky.social
1st in a 4-part BRC-Analytics series on Cyclospora outbreak analysis: what genomes, genotyping panels and sequencing data exist, and how an independent open implementation of the public 8-marker method is built and validated in Galaxy.
https://gxy.io/blog/Cyclospora1

##UseGalaxy ##GalaxyProject
Assembly quality across the 49 public C. cayetanensis assemblies. None is chromosome-level and the median assembly is in 1,391 pieces. The CDC Cyclospora eight-marker genotyping panel: each amplicon with its primers, SNP count and haplotype-calling windows. Stage-by-stage comparison of the legacy R implementation and PyEuk. PyEuk's distance and clustering path, from haplotype sheet to outbreak clusters.
August 14, 2026 at 8:52 PM
brcanalytics.bsky.social
1st in a 4-part BRC-Analytics series on Cyclospora outbreak analysis: what genomes, genotyping panels and sequencing data exist, and how an independent open implementation of the public 8-marker method is built and validated in Galaxy.
https://gxy.io/blog/Cyclospora1

##UseGalaxy ##GalaxyProject
Assembly quality across the 49 public C. cayetanensis assemblies. None is chromosome-level and the median assembly is in 1,391 pieces. The CDC Cyclospora eight-marker genotyping panel: each amplicon with its primers, SNP count and haplotype-calling windows. Stage-by-stage comparison of the legacy R implementation and PyEuk. PyEuk's distance and clustering path, from haplotype sheet to outbreak clusters.
August 14, 2026 at 8:52 PM
galaxyproject.bsky.social
After ten years on a Jekyll-on-GitHub setup, galaxyproject.eu is now completely powered by the Galaxy Hub — a fast, metadata-driven home that any Galaxy community can reuse.
https://galaxyproject.org/news/2026-08-07-eu-website-on-galaxy-hub/

##UseGalaxy ##GalaxyProject ##EOSC
The European Galaxy Project Website Is Now Fully Served by the Galaxy Hub
After ten years on a Jekyll-on-GitHub setup, galaxyproject.eu is now completely powered by the Galaxy Hub — a fast, metadata-driven home that any Galaxy community can reuse.
galaxyproject.org
August 12, 2026 at 7:07 PM
brcanalytics.bsky.social
approaches for comprehensive surveys and remember: these things improve FAST! https://galaxyproject.org/news/2025-12-2-claude-lit/

##galaxy ##galaxyproject ##claude ##chatgpt ##llm ##anthropic (2/2)
Using Claude AI for Literature Searches
LLMs for literature search produce 'interesting' results: It is almost useful
galaxyproject.org
December 2, 2025 at 10:14 PM
brcanalytics.bsky.social
Last Friday, we hosted a video webinar Q&A about BRC Analytics where we discussed the future of the project and encouraged interested people to get involved in planning for next steps. A video of that webinar (w/auto-generated captions) is available on YouTube: youtu.be/dWK8AAk-Wns
BRC Analytics Q&A 2024-10-04
YouTube video by GalaxyProject
youtu.be
October 8, 2024 at 6:13 PM
bioconductor.bsky.social
📝 New Bioconductor blog post!

Written during #GBCC2025 CoFest, this post highlights recent work to bring Bioconductor tools into Galaxy, featuring training materials, wrapper examples, and ideas for tool developers.

Read more 👉 blog.bioconductor.org/posts/2025-0...

#Bioconductor #GalaxyProject
Bringing Bioconductor to Galaxy: A CoFest Collaboration – Bioconductor community blog
Written during CoFest at GBCC2025, this post shares training materials, introduces Galaxy tool wrapping, and previews what’s next for integrating Bioconductor tools in Galaxy.
blog.bioconductor.org
July 3, 2025 at 9:40 AM
bebatut.bsky.social
🚀 Want to get started?

🔬 Explore Galaxy-Ecology workflows
📖 Check out the Galaxy Training Network for tutorials
🤝 Join the community & contribute!

#OpenData #GalaxyProject
March 28, 2025 at 9:59 AM