#GutMicrobes
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jcamthrash.bsky.social
CarveMe-GutMicrobes: Automated Metabolic Model Reconstruction for Gut Microbial Species and Communities www.biorxiv.org/content/10.6... #jcampubs
June 29, 2026 at 1:43 PM
kkormas.bsky.social
The disciplinary matrix of #holobiont biology
www.science.org/doi/10.1126/...
#SymbioSky #gutmicrobes #hostmicrobiota #hostmicrobe #microbialecology #symbiosis #microbeinteractions
The disciplinary matrix of holobiont biology
Uniting life’s seen and unseen realms guides a conceptual advance in research
www.science.org
November 15, 2024 at 10:31 AM
kkormas.bsky.social
#cattle #microbiome #holobiont #gutmicrobes #hostmicrobe #microbialecology #microbeinteractions
June 5, 2026 at 4:18 AM
lizsayavedra.bsky.social
Our brand-new paper in #GutMicrobes reveals how Bilophila wadsworthia and Bacteroides thetaiotaomicron interact in the gut, driving H₂S production & metabolic shifts with potential links to inflammation & disease. #GutHealth Check it out: doi.org/10.1080/1949...
Bacteroides thetaiotaomicron enhances H2S production in Bilophila wadsworthia
Sulfate- and sulfite-reducing bacteria (SRB) are a group of strict anaerobes found within the human gut. Bilophila wadsworthia, a sulfite-reducing bacterium which produces hydrogen sulfide (H2S) fr...
doi.org
November 29, 2024 at 9:05 AM
aizepellon.bsky.social
Thrilled to share the newest publication from #AnguitaLab 🧫🎉🍵

"The microbiota metabolite, phloroglucinol, confers long-term protection against inflammation" #GutMicrobes @tandfresearch.bsky.social

@cicbiogune.bsky.social
#MicroSky #ImmunoSky #phloroglucinol

www.tandfonline.com/doi/full/10....
The microbiota metabolite, phloroglucinol, confers long-term protection against inflammation
Phloroglucinol is a key byproduct of gut microbial metabolism that has been widely used as a treatment for irritable bowel syndrome. Here, we demonstrate that phloroglucinol tempers macrophage resp...
www.tandfonline.com
December 16, 2024 at 3:41 PM
kiranrpatil.bsky.social
Interested in Genome-scale Metabolic Models for Gut microbes? Check out our latest preprint on automated model reconstruction. Carved by @ariannabasilecc.bsky.social, in teamwork with Aditi, @indraroux.bsky.social, @metagenomez.bsky.social, and @skamrad.bsky.social. www.biorxiv.org/content/10.6...
CarveMe-GutMicrobes: Automated Metabolic Model Reconstruction for Gut Microbial Species and Communities
Genome-scale metabolic models (GSMMs) are important aids towards system-level understanding of the metabolic physiology of the gut microbes and for rational microbiome engineering. While large-scale r...
www.biorxiv.org
July 1, 2026 at 5:23 AM
seqbiome.bsky.social
Our Head of Bio-Informatics Marcus Claesson & our Senior Bioinformatician Dr Shriram Patel were major contributors to a recently published multi-omics study on #IBD in #GutMicrobes.
seqbiome.com/host-microbe...

#microbiomeanalysis #microbiomesequencing #clinicalresearch #Metagenomics
January 21, 2025 at 1:52 PM
kkormas.bsky.social
Using the amazing #protein sources of #lupin and the top invader fish #Lagocephalus sceleratus in #fishmeal, leaves the #european #seabass #Dicentrarchus labrax #gut #bacteria rather unmodified
#SymbioSky #MicroSky #microbiomesky #gutmicrobes #hostmicrobe #microbeinteractions #aquaculture
biorxiv-microbiol.bsky.social bioRxiv Microbiology @biorxiv-microbiol.bsky.social · Jun 26
Consistent gut bacterial microbiota in European sea bass fed aquafeeds containing sustainable plant and invasive fish-based ingredients https://www.biorxiv.org/content/10.64898/2026.06.26.733563v1
June 26, 2026 at 6:28 PM
kkormas.bsky.social
Integrating Isotopic #Niche Metrics and #Gut #Microbiota Assembly Reveals Codiversification-Mediated Coexistence Mechanisms in Riverine #Fish
#freshwater #phylosymbiosis #holobiont #isotope #symbiosis #gutmicrobes #SymbioSky #MicroSky #microbiomesky
dx.doi.org/10.2139/ssrn...
Integrating Isotopic Niche Metrics and Gut Microbiota Assembly Reveals Codiversification-Mediated Coexistence Mechanisms in Riverine Fish
Understanding niche dimensions and interspecific niche overlap is fundamental for evaluating resource partitioning and competitive interactions among sympatric
dx.doi.org
April 5, 2025 at 7:50 AM
umdscience.bsky.social
Biological sciences Ph.D. student Gabriela Arp discovered how #GutMicrobes tell our hormones what to do ➡️ go.umd.edu/arp
Gabriela Arp wearing a lab coat and working with lab instruments
February 12, 2026 at 8:05 PM
hosmic.bsky.social
#gutmicrobes #hostmicrobiota #hostmicrobe #microbialecology #symbiosis #microbeinteractions #holobiont #hostmicrobeecology @microbiomevif.bsky.social @mikrobiokosmos.bsky.social
kkormas.bsky.social Kostas Kormas 🐟🦞🐚🦭💩🔬🧪🧬📝 ✈️ 🏳️‍🌈 @kkormas.bsky.social · May 26
Our new study on how altitudinal gradients in river systems affect the #diet - #microbiome coupling in the #benthic stone #loach (#Schistura fasciolata) across the Yuanjiang-Red River Basin, #China [1/3]
#SymbioSky #MicroSky #microbiomesky @hostmicrobelit.bsky.social
doi.org/10.1016/j.ge...
Redirecting
doi.org
May 26, 2026 at 9:41 AM
bhmullish.bsky.social
Great to see this work from Shiv Radhakrishnan and colleagues out in #GutMicrobes - using network analysis to explore #microbiome #metabolome interactions in an #IBD inception cohort: doi.org/10.1080/1949... @imperialmdr.bsky.social @imperialhepatology.bsky.social #IBDSky #GISky
doi.org
July 18, 2025 at 12:12 PM
wffricke.bsky.social
“The gut microbiota predicts and time-restricted feeding delays experimental colitis” New paper out from our group in GutMicrobes: www.tandfonline.com/doi/full/10..... Congratulations to first authors Hannah Ruple and Eva Haasis. (1/x)
The gut microbiota predicts and time-restricted feeding delays experimental colitis
The etiology of inflammatory bowel disease (IBD) remains unclear, treatment options unsatisfactory and disease development difficult to predict for individual patients. Dysbiosis of the gastrointes...
www.tandfonline.com
January 24, 2025 at 2:45 PM
fds.wsocial.eu
#GutMicrobes Actively Support #Immunity in People Living with #HIV
#Science
Gut Microbes Actively Support Immunity in People Living with HIV - Weizmann Wonder Wander - News, Features and Discoveries
A study conducted in Israel and Ethiopia, led by researchers at the Weizmann Institute of Science and Hadassah, reveals that the microbiome partly compensates for the immune damage caused by the viral...
wis-wander.weizmann.ac.il
September 12, 2026 at 3:12 PM
kkormas.bsky.social
#Sex -related #gut #microbiota in three geographically separated #Norway #lobster (#Nephrops norvegicus) #populations

doi.org/10.1101/2025...

#SymbioSky #MikroSky #highereducation #gutmicrobes #hostmicrobiota #hostmicrobe #microbialecology #symbiosis #microbeinteractions #hostmicrobeecology
Sex-related gut microbiota in three geographically separated Norway lobster (Nephrops norvegicus) populations
Despite the ecological and economic interest of the Norway lobster (Nephrops norvegicus), its gut microbiota remains largely understudied. The current study aimed at investigating the gut bacterial mi...
doi.org
February 15, 2025 at 8:16 AM
biohackingpathway.bsky.social
Follow @biohackingpathway for more

#GutHealthhashtag/GutHealth" class="hover:underline text-blue-600 dark:text-sky-400 no-card-link">#GutHealth #GutMicrobiome #MicrobiomeDiversity #GutHealth #HealthyDiet #Nutrition #Wellness #Science #HealthTips #wellnesscommunity #wellnesslife #DietaryDiversity #GutMicrobes
July 23, 2026 at 5:08 AM
biohackingpathway.bsky.social
Follow @biohackingpathway for more

#GutHealthhashtag/GutHealth" class="hover:underline text-blue-600 dark:text-sky-400 no-card-link">#GutHealth #GutMicrobiome #MicrobiomeDiversity #GutHealth #HealthyDiet #Nutrition #Wellness #Science #HealthTips #wellnesscommunity #wellnesslife #DietaryDiversity #GutMicrobes
May 11, 2026 at 3:34 PM
biohackingpathway.bsky.social
Follow @biohackingpathway for more

#GutHealthhashtag/GutHealth" class="hover:underline text-blue-600 dark:text-sky-400 no-card-link">#GutHealth #GutMicrobiome #MicrobiomeDiversity #GutHealth #HealthyDiet #Nutrition #Wellness #Science #HealthTips #wellnesscommunity #wellnesslife #DietaryDiversity #GutMicrobes
May 14, 2025 at 4:08 AM
jacquesizard.bsky.social
Microbiome and metabolome data decipher the keystone organism(s) in the digestive tract of primate #microbiome #metabolome #gutmicrobiome #GutMicrobes #microsky doi.org/10.1128/msys...
Microbiome and metabolome association network analysis identifies Clostridium_sensu_stricto_1 as a stronger keystone genus candidate than Bifidobacterium in the gut of common marmosets | mSystems
Previous studies have identified significant individuality within the gut microbiome of common marmosets. The reasons for this inter-subject variability and how it relates to health in captivity are p...
doi.org
July 25, 2025 at 7:57 PM
biohackingpathway.bsky.social
Follow @biohackingpathway for more

#GutHealthhashtag/GutHealth" class="hover:underline text-blue-600 dark:text-sky-400 no-card-link">#GutHealth #GutMicrobiome #MicrobiomeDiversity #GutHealth #HealthyDiet #Nutrition #Wellness #Science #HealthTips #wellnesscommunity #wellnesslife #DietaryDiversity #GutMicrobes
June 16, 2026 at 10:26 PM
genesndiseases.bsky.social
#VitaminADeficiency from #pregnancy reduces #SCFA-producing #GutMicrobes, lowering SCFA levels and suppressing colonic CEACAM1, impairing epithelial integrity; timely postnatal VA supplementation restores SCFAs, and protects colonic barrier function.
Read: doi.org/10.1016/j.ge...
Vitamin A deficiency suppresses CEACAM1 to impair colonic epithelial barrier function via downregulating microbial-derived short-chain fatty acids
April 18, 2026 at 6:45 AM
anthropology.net
Gut microbes may have powered human brain evolution by enhancing energy use. A new study links large-brain primates' gut microbes to higher metabolism. #HumanEvolution #Anthropology #GutMicrobes #PrimateResearch
Did Gut Microbes Help Fuel the Evolution of Large Human Brains?
The Energetic Cost of Brain Growth
www.anthropology.net
December 3, 2024 at 3:24 PM
yersim.bsky.social
📢 new paper alert! 📢
Do we find the same #bacteria in the mouth and in the gut of stunded children?

Go find out: doi.org/10.1080/1949...

#microbiome #gut #gutmicrobes #metagenomic

With @vonaeschlab.bsky.social at @dmf-unil.bsky.social
Strain-level translocation and enrichment dynamics of oral bacteria in the lower gastrointestinal tract of stunted children
Emerging evidence suggests that ectopic colonization of oral bacteria in the lower digestive tract may exacerbate gastrointestinal disorders. Nevertheless, it remains unclear whether bacteria of or...
doi.org
April 7, 2026 at 12:42 PM
ihu-infiny.bsky.social
🔬 #TuesdayReading

Congrats to @chassainglab.bsky.social , co-Scientific Director of IHU Infiny & Head of the Microbiota-Host Interactions team @institutpasteur.bsky.social, on his study in #GutMicrobes!

⬇️ 1/2
March 25, 2025 at 9:26 AM
kkormas.bsky.social
The #intestinal clock drives the #microbiome to maintain gastrointestinal #homeostasis
doi.org/10.1038/s414...
#SymbioSky #SciComm #MikroSky #gutmicrobes #hostmicrobiota #hostmicrobe #microbialecology #symbiosis #microbeinteractions #mustread
The intestinal clock drives the microbiome to maintain gastrointestinal homeostasis - Nature Communications
Here, Heddes et al. demonstrate a major role for the intestinal circadian clock in driving microbiome dynamics. Microbiota transfer from intestinal clock-deficient mice promotes altered intestinal phe...
doi.org
January 1, 2025 at 1:57 PM