Ela Pertea's keynote at HitSeq is starting!
July 14, 2026 at 3:06 PM
Ela Pertea's keynote at HitSeq is starting!
🧬🖥️ @noorpratap.bsky.social is now talking about alevin-fry-atac at HitSeq! Come check out his talk (and Zahra's I. oarfish right after)!
July 23, 2025 at 1:06 PM
🧬🖥️ @noorpratap.bsky.social is now talking about alevin-fry-atac at HitSeq! Come check out his talk (and Zahra's I. oarfish right after)!
🚨 Final Call! 🚨
The last day to submit abstracts for the HitSeq Special Track is April 17th! 🧬
📅 HitSeq is part of ISMB 2025, July 20–24, Liverppol, UK 🇬🇧
📢 Don’t miss your chance to present your work on high-throughput sequencing!
Submit now 👉 www.iscb.org/ismbeccb2025...
#HitSeq #ISMB2025
The last day to submit abstracts for the HitSeq Special Track is April 17th! 🧬
📅 HitSeq is part of ISMB 2025, July 20–24, Liverppol, UK 🇬🇧
📢 Don’t miss your chance to present your work on high-throughput sequencing!
Submit now 👉 www.iscb.org/ismbeccb2025...
#HitSeq #ISMB2025
April 16, 2025 at 10:53 PM
🚨 Final Call! 🚨
The last day to submit abstracts for the HitSeq Special Track is April 17th! 🧬
📅 HitSeq is part of ISMB 2025, July 20–24, Liverppol, UK 🇬🇧
📢 Don’t miss your chance to present your work on high-throughput sequencing!
Submit now 👉 www.iscb.org/ismbeccb2025...
#HitSeq #ISMB2025
The last day to submit abstracts for the HitSeq Special Track is April 17th! 🧬
📅 HitSeq is part of ISMB 2025, July 20–24, Liverppol, UK 🇬🇧
📢 Don’t miss your chance to present your work on high-throughput sequencing!
Submit now 👉 www.iscb.org/ismbeccb2025...
#HitSeq #ISMB2025
I will talk about those papers in my Hitseq keynote tomorrow at #ISMBECCB2025, so if you are in Liverpool don't miss it.
July 23, 2025 at 3:17 PM
I will talk about those papers in my Hitseq keynote tomorrow at #ISMBECCB2025, so if you are in Liverpool don't miss it.
The GreedyMini paper is finally out as part of #ISMBECCB2025 proceedings: academic.oup.com/bioinformati.... Arseny will present it on the last day (July 24th) and last session (14:20) of the HiTSeq meeting.
GreedyMini: generating low-density DNA minimizers
AbstractMotivation. Minimizers are the most popular k-mer selection scheme in algorithms and data structures analyzing high-throughput sequencing (HTS) dat
academic.oup.com
July 16, 2025 at 6:31 AM
The GreedyMini paper is finally out as part of #ISMBECCB2025 proceedings: academic.oup.com/bioinformati.... Arseny will present it on the last day (July 24th) and last session (14:20) of the HiTSeq meeting.
📣Meet our amazing @HiTSeq Keynotes speakers at the #ISMB2024 conference on July 12-16 in Montréal, Canada! Bringing the most novel statistical and computational methods for medicine and cell evolution to you! Call for abstracts is already open! iscb.org/ismb2024/home #ISCB
February 20, 2024 at 4:47 PM
📣Meet our amazing @HiTSeq Keynotes speakers at the #ISMB2024 conference on July 12-16 in Montréal, Canada! Bringing the most novel statistical and computational methods for medicine and cell evolution to you! Call for abstracts is already open! iscb.org/ismb2024/home #ISCB
@longtrec.bsky.social is presenting the latest & hottest long-read transcriptomics research at #ISMBECCB2025! Posters D-176 (isONclust3), C-207 (Multisample isoforms), C-237 (TSS prediction), D-202 (Single-cellSQANTI), and talks at iRNA (TUSCO, Amanita) and HitSeq (SQANTI-reads) @hitseq.bsky.social
July 21, 2025 at 10:28 AM
@longtrec.bsky.social is presenting the latest & hottest long-read transcriptomics research at #ISMBECCB2025! Posters D-176 (isONclust3), C-207 (Multisample isoforms), C-237 (TSS prediction), D-202 (Single-cellSQANTI), and talks at iRNA (TUSCO, Amanita) and HitSeq (SQANTI-reads) @hitseq.bsky.social
We open our second day at #Hitseq @hitseq.bsky.social with our last key note speaker Tobias Marschall and his insightful talk about the human pangenome and the challenges for structural variation analysis. His work has focused on tackling current limitations such as sample size and remaining gaps
July 24, 2025 at 9:02 AM
We open our second day at #Hitseq @hitseq.bsky.social with our last key note speaker Tobias Marschall and his insightful talk about the human pangenome and the challenges for structural variation analysis. His work has focused on tackling current limitations such as sample size and remaining gaps
🖥️🧬 Looking forward to the first day of HiTSeq at #ISMB2025 today. If you're around and want to chat, let me know! Make sure to see the COMBINE-lab goodness, @noorpratap.bsky.social's talk on alevin-fry-atac and Zhara's talk on Oarfish, at HiTSeq right after the lunch break!
July 23, 2025 at 6:58 AM
🖥️🧬 Looking forward to the first day of HiTSeq at #ISMB2025 today. If you're around and want to chat, let me know! Make sure to see the COMBINE-lab goodness, @noorpratap.bsky.social's talk on alevin-fry-atac and Zhara's talk on Oarfish, at HiTSeq right after the lunch break!
📢 1 week left to submit your abstract for #ISMBECCB2025 to @hitseq.bsky.social !!!!
Share your work & discover new algorithms and applications for sequencing data analysis!!!! 💽 🧬
🗓️ April 17, 2025
📥 Submit: www.iscb.org/ismbeccb2025...
and select HitSeq!
@bcbhubcsic.bsky.social @iscb.bsky.social
Share your work & discover new algorithms and applications for sequencing data analysis!!!! 💽 🧬
🗓️ April 17, 2025
📥 Submit: www.iscb.org/ismbeccb2025...
and select HitSeq!
@bcbhubcsic.bsky.social @iscb.bsky.social
April 10, 2025 at 12:50 PM
📢 1 week left to submit your abstract for #ISMBECCB2025 to @hitseq.bsky.social !!!!
Share your work & discover new algorithms and applications for sequencing data analysis!!!! 💽 🧬
🗓️ April 17, 2025
📥 Submit: www.iscb.org/ismbeccb2025...
and select HitSeq!
@bcbhubcsic.bsky.social @iscb.bsky.social
Share your work & discover new algorithms and applications for sequencing data analysis!!!! 💽 🧬
🗓️ April 17, 2025
📥 Submit: www.iscb.org/ismbeccb2025...
and select HitSeq!
@bcbhubcsic.bsky.social @iscb.bsky.social
We have officially started #HitSeq track @hitseq.bsky.social at #ISMBECCB2025. Francisco de la Vega, introduces our first #keynote speaker Valentina Boeva @valboeva.bsky.social with her talk: "Learning variant effects on chromatin accessibility and 3D structure without matched Hi-C data"
July 23, 2025 at 10:56 AM
We have officially started #HitSeq track @hitseq.bsky.social at #ISMBECCB2025. Francisco de la Vega, introduces our first #keynote speaker Valentina Boeva @valboeva.bsky.social with her talk: "Learning variant effects on chromatin accessibility and 3D structure without matched Hi-C data"
#ISMB2026 welcome to the first day of #HitSeq! We will start this year session at 11AM with a keynote form Andre Kahles: “Petabase-Scale Sequence Search with MetaGraph” at International Ballroom Center. Full schedule: www.hitseq.org/schedule.html
HiTSeq 2026: Conference on High Throughput Sequencing Algorithms and Applications - Schedule
www.hitseq.org
July 13, 2026 at 12:24 PM
#ISMB2026 welcome to the first day of #HitSeq! We will start this year session at 11AM with a keynote form Andre Kahles: “Petabase-Scale Sequence Search with MetaGraph” at International Ballroom Center. Full schedule: www.hitseq.org/schedule.html
July 24, 2025 at 7:56 AM
Our #ISMB2026 paper is now online!
I’m excited to present it at HiTSeq on July 13.
Many thanks to my advisor @pashadag.bsky.social. I’m also grateful to @iscb.bsky.social for awarding me the Conference Fellowship.
If you’ll be at ISMB, feel free to stop by my talk and say hi. I’d love to connect!
I’m excited to present it at HiTSeq on July 13.
Many thanks to my advisor @pashadag.bsky.social. I’m also grateful to @iscb.bsky.social for awarding me the Conference Fellowship.
If you’ll be at ISMB, feel free to stop by my talk and say hi. I’d love to connect!
The gift of novelty: repeat-robust k-mer-based estimators of mutation rates
AbstractMotivation. Estimating mutation rates between evolutionarily related sequences is a central problem in molecular evolution. Due to the rapid expans
academic.oup.com
July 11, 2026 at 1:39 PM
Our #ISMB2026 paper is now online!
I’m excited to present it at HiTSeq on July 13.
Many thanks to my advisor @pashadag.bsky.social. I’m also grateful to @iscb.bsky.social for awarding me the Conference Fellowship.
If you’ll be at ISMB, feel free to stop by my talk and say hi. I’d love to connect!
I’m excited to present it at HiTSeq on July 13.
Many thanks to my advisor @pashadag.bsky.social. I’m also grateful to @iscb.bsky.social for awarding me the Conference Fellowship.
If you’ll be at ISMB, feel free to stop by my talk and say hi. I’d love to connect!
Meet our amazing sponsor PacBio @pacbio.bsky.social for @hitseq.bsky.social track at #ISMBECCB2025 represented by Elizabeth Tseng with her talk "Bioinformatics analysis for long-read RNA sequencing: challenges and promises" #hitseq #iscb #sequencing #application #iverpool #uk
July 23, 2025 at 4:00 PM
Meet our amazing sponsor PacBio @pacbio.bsky.social for @hitseq.bsky.social track at #ISMBECCB2025 represented by Elizabeth Tseng with her talk "Bioinformatics analysis for long-read RNA sequencing: challenges and promises" #hitseq #iscb #sequencing #application #iverpool #uk
The HitSeq cosi is totally our jam.
December 22, 2025 at 3:43 PM
The HitSeq cosi is totally our jam.
HitSeq was really hitting hard today!
July 15, 2026 at 12:15 AM
HitSeq was really hitting hard today!
Today’s COSI spotlight is on HiTSeq: High Throughput Sequencing Algorithms and Applications!
HiTSeq focuses on the latest computational advances for analyzing high-throughput sequencing data.
HiTSeq focuses on the latest computational advances for analyzing high-throughput sequencing data.
March 18, 2025 at 9:01 AM
Today’s COSI spotlight is on HiTSeq: High Throughput Sequencing Algorithms and Applications!
HiTSeq focuses on the latest computational advances for analyzing high-throughput sequencing data.
HiTSeq focuses on the latest computational advances for analyzing high-throughput sequencing data.
@imartayan.bsky.social pronounced my name incorrectly. Is it wrong of me to hope that generations of students and bioinformaticians to come will continue to do so?
www.youtube.com/watch?v=35Yg...
www.youtube.com/watch?v=35Yg...
Conway-Bromage-Lyndon (CBL): an exact, dynamic... - Igor Martayan - HiTSeq - ISMB 2024
YouTube video by ISCB
www.youtube.com
March 11, 2025 at 5:51 AM
@imartayan.bsky.social pronounced my name incorrectly. Is it wrong of me to hope that generations of students and bioinformaticians to come will continue to do so?
www.youtube.com/watch?v=35Yg...
www.youtube.com/watch?v=35Yg...
Submit via the ISMB 2026 system and select HiTSeq as the track. More info at hitseq.org.
HiTSeq 2026: Conference on High Throughput Sequencing Algorithms and Applications - Home
hitseq.org
April 1, 2026 at 5:52 PM
Submit via the ISMB 2026 system and select HiTSeq as the track. More info at hitseq.org.
We are thrilled to have our HiTSeq member, Dr. Christina Boucher, featured in a new episode for the #BioinfoBridges
#iscbc #podcast! 🎙️🔬
Have you ever wondered how bioinformatics is used to decode microbial genomes?
🚀 Full Episode Now!
🎙️ Spotify: open.spotify.com/episode/7uhm...
#NGS #microbiology
#iscbc #podcast! 🎙️🔬
Have you ever wondered how bioinformatics is used to decode microbial genomes?
🚀 Full Episode Now!
🎙️ Spotify: open.spotify.com/episode/7uhm...
#NGS #microbiology
March 26, 2025 at 8:07 PM
We are thrilled to have our HiTSeq member, Dr. Christina Boucher, featured in a new episode for the #BioinfoBridges
#iscbc #podcast! 🎙️🔬
Have you ever wondered how bioinformatics is used to decode microbial genomes?
🚀 Full Episode Now!
🎙️ Spotify: open.spotify.com/episode/7uhm...
#NGS #microbiology
#iscbc #podcast! 🎙️🔬
Have you ever wondered how bioinformatics is used to decode microbial genomes?
🚀 Full Episode Now!
🎙️ Spotify: open.spotify.com/episode/7uhm...
#NGS #microbiology
I will attend #ISMB2026 and be presenting Amaranth, a scRNA-Seq assembler that improves single-cell transcript assembly by modeling UMI reads and internal reads discriminatively.
Talk presentation will be on July 14, Tue, at 2:20 pm in HitSeq.
Paper: academic.oup.com/bioinformati...
Talk presentation will be on July 14, Tue, at 2:20 pm in HitSeq.
Paper: academic.oup.com/bioinformati...
Validate User
doi.org
July 13, 2026 at 2:31 AM
I will attend #ISMB2026 and be presenting Amaranth, a scRNA-Seq assembler that improves single-cell transcript assembly by modeling UMI reads and internal reads discriminatively.
Talk presentation will be on July 14, Tue, at 2:20 pm in HitSeq.
Paper: academic.oup.com/bioinformati...
Talk presentation will be on July 14, Tue, at 2:20 pm in HitSeq.
Paper: academic.oup.com/bioinformati...
John will share how to achieve higher throughput and fidelity in screening via flexible, high-accuracy barcode decoding. He presents a principled, information theory-based software solution that unifies diverse, demanding decoding tasks within one robust framework.
#HiTSeq
📅 July 23 | 📍 Poster C-192
#HiTSeq
📅 July 23 | 📍 Poster C-192
July 19, 2025 at 5:33 PM
John will share how to achieve higher throughput and fidelity in screening via flexible, high-accuracy barcode decoding. He presents a principled, information theory-based software solution that unifies diverse, demanding decoding tasks within one robust framework.
#HiTSeq
📅 July 23 | 📍 Poster C-192
#HiTSeq
📅 July 23 | 📍 Poster C-192
Deadline for proceeding papers for #ISMB26 approaching fast - send your work on sequence analysis algos and tag then for #HiTSeq @hitseq.bsky.social
📢 The #ISMB2026 Proceedings deadline is ONE WEEK away!
📅 Deadline: January 20, 2026 (no extensions)
Selected papers will be published in Bioinformatics and presented at the conference in DC this July!
📥Submit here: https://www.iscb.org/ismb2026/call-for-submissions/proceedings
📅 Deadline: January 20, 2026 (no extensions)
Selected papers will be published in Bioinformatics and presented at the conference in DC this July!
📥Submit here: https://www.iscb.org/ismb2026/call-for-submissions/proceedings
January 16, 2026 at 10:02 PM
Deadline for proceeding papers for #ISMB26 approaching fast - send your work on sequence analysis algos and tag then for #HiTSeq @hitseq.bsky.social
Submit your abstract to HiTSeq at ISMB 2025 (July 20–24, Liverpool, UK)! Topics: short/long read analysis, assembly, variant detection, methylation, metagenomics, oncology, tools & more. Open to academia + industry. Deadline: April 17!
www.hitseq.org
www.hitseq.org
HiTSeq 2025: Conference on High Throughput Sequencing Algorithms and Applications - Home
www.hitseq.org
April 12, 2025 at 4:24 AM
Submit your abstract to HiTSeq at ISMB 2025 (July 20–24, Liverpool, UK)! Topics: short/long read analysis, assembly, variant detection, methylation, metagenomics, oncology, tools & more. Open to academia + industry. Deadline: April 17!
www.hitseq.org
www.hitseq.org