"To maintain the integrity of global influenza surveillance, we further recommend the sequences generated in this study be verified and potentially withdrawn."
Help. My Flu Databases -- they are sick.
www.nature.com/articles/s41...
Help. My Flu Databases -- they are sick.
www.nature.com/articles/s41...
Evidence of widespread sequencing errors in global avian influenza study - Nature Communications
Nature Communications - Evidence of widespread sequencing errors in global avian influenza study
www.nature.com
November 3, 2026 at 12:25 PM
"To maintain the integrity of global influenza surveillance, we further recommend the sequences generated in this study be verified and potentially withdrawn."
Help. My Flu Databases -- they are sick.
www.nature.com/articles/s41...
Help. My Flu Databases -- they are sick.
www.nature.com/articles/s41...
Review @natrevgenet.nature.com
Sequencing and analysis of the human adaptive immune receptor repertoire
www.nature.com/articles/s41...
Sequencing and analysis of the human adaptive immune receptor repertoire
www.nature.com/articles/s41...
November 3, 2026 at 1:32 AM
Review @natrevgenet.nature.com
Sequencing and analysis of the human adaptive immune receptor repertoire
www.nature.com/articles/s41...
Sequencing and analysis of the human adaptive immune receptor repertoire
www.nature.com/articles/s41...
What if de novo peptide sequencing uses a proteome as a guide without being constrained by it?
Unlike DB search, PepPr, a peptide language model improves variant peptide identification and enhances AB sequencing hypervariable regions.
Preprint by the Gagneur lab: www.biorxiv.org/content/10.6...
Unlike DB search, PepPr, a peptide language model improves variant peptide identification and enhances AB sequencing hypervariable regions.
Preprint by the Gagneur lab: www.biorxiv.org/content/10.6...
PepPr: De Novo peptide sequencing with peptide priors
Mass spectrometry-based peptide sequencing underpins proteomics. Database search confines to predefined candidates, whereas de novo peptide sequencing (DNPS) struggles with incomplete spectra. Existin...
www.biorxiv.org
November 2, 2026 at 9:26 PM
What if de novo peptide sequencing uses a proteome as a guide without being constrained by it?
Unlike DB search, PepPr, a peptide language model improves variant peptide identification and enhances AB sequencing hypervariable regions.
Preprint by the Gagneur lab: www.biorxiv.org/content/10.6...
Unlike DB search, PepPr, a peptide language model improves variant peptide identification and enhances AB sequencing hypervariable regions.
Preprint by the Gagneur lab: www.biorxiv.org/content/10.6...
November 3, 2026 at 11:10 PM
Sequencing is a helluva psychological phenomenon
Enough with the doom and gloom, Brewers fans. If I told you in September we'd be up 3-1 in the World Series with Miz on the mound to clinch - every one of you would take it.
October 28, 2026 at 2:54 PM
Sequencing is a helluva psychological phenomenon
A targeted sorting-sequencing pipeline for resolving membrane-intact microbial communities spj.science.org/doi/10.34133... #jcampubs
November 2, 2026 at 2:41 PM
A targeted sorting-sequencing pipeline for resolving membrane-intact microbial communities spj.science.org/doi/10.34133... #jcampubs
Maybe because the UK learnt as times and attitudes changed and they contributed to the world.
Vaccines, Antibiotics, DNA sequencing, Railroads, radar, jet engines, turboprops, crusade against slavery.
Russia is stuck in the past, doesn't evolve.
Vaccines, Antibiotics, DNA sequencing, Railroads, radar, jet engines, turboprops, crusade against slavery.
Russia is stuck in the past, doesn't evolve.
November 1, 2026 at 3:43 PM
Maybe because the UK learnt as times and attitudes changed and they contributed to the world.
Vaccines, Antibiotics, DNA sequencing, Railroads, radar, jet engines, turboprops, crusade against slavery.
Russia is stuck in the past, doesn't evolve.
Vaccines, Antibiotics, DNA sequencing, Railroads, radar, jet engines, turboprops, crusade against slavery.
Russia is stuck in the past, doesn't evolve.
While authors assert they carved a pumpkin, they fail to provide support for this claim. Please include DNA sequencing results to confirm gourd identity.
October 31, 2026 at 10:29 AM
While authors assert they carved a pumpkin, they fail to provide support for this claim. Please include DNA sequencing results to confirm gourd identity.
Nature research paper: Rare and common genetic variants shape single-cell immune gene expression
go.nature.com/4A0afsA
go.nature.com/4A0afsA
Rare and common genetic variants shape single-cell immune gene expression - Nature
Phase 1 of TenK10K takes single-cell RNA sequencing and matched whole-genome sequencing data from 1,925 individuals, enabling detection of associations for common and rare genetic variants, the latter of which have been uncharacterized in their impact on cell-specific gene expression.
go.nature.com
November 2, 2026 at 1:26 PM
Nature research paper: Rare and common genetic variants shape single-cell immune gene expression
go.nature.com/4A0afsA
go.nature.com/4A0afsA
Curious about long-read sequencing and how to turn raw data into a high-quality genome assembly? Want to get the most out of your sequencing data and avoid common assembly pitfalls?
🚀 Join our Long-Read Genome Assembly course!
www.physalia-courses.org/courses-work...
🚀 Join our Long-Read Genome Assembly course!
www.physalia-courses.org/courses-work...
November 2, 2026 at 11:08 AM
Curious about long-read sequencing and how to turn raw data into a high-quality genome assembly? Want to get the most out of your sequencing data and avoid common assembly pitfalls?
🚀 Join our Long-Read Genome Assembly course!
www.physalia-courses.org/courses-work...
🚀 Join our Long-Read Genome Assembly course!
www.physalia-courses.org/courses-work...
When sequencing with @plasmidsaurus.bsky.social, I will always spend the extra money for premium (ligation) sequencing. One consensus sequence often can't tell the whole story!
A few months ago my Dad brought a bad cold home from a cruise. I thought I might find an unusual virus, but the PCR said just Rhinovirus. But when I sequenced it I found something I'd never seen before - a 70/30 co-infection of HRV-B and HRV-C! So two different Rhinovirus species at once!
November 2, 2026 at 1:25 PM
When sequencing with @plasmidsaurus.bsky.social, I will always spend the extra money for premium (ligation) sequencing. One consensus sequence often can't tell the whole story!
The authors have posted a reply. I havent reviewed it in full. But they claim a 'bulk upload' error with GISAID.
www.nature.com/articles/s41...
www.nature.com/articles/s41...
Reply to: Evidence of widespread sequencing errors in global avian influenza study - Nature Communications
Nature Communications - Reply to: Evidence of widespread sequencing errors in global avian influenza study
www.nature.com
November 3, 2026 at 2:55 PM
The authors have posted a reply. I havent reviewed it in full. But they claim a 'bulk upload' error with GISAID.
www.nature.com/articles/s41...
www.nature.com/articles/s41...
The sequencing blipped in the last clone batch.
October 31, 2026 at 5:37 PM
The sequencing blipped in the last clone batch.
Currently attending a conference on long-read sequencing #LRUA26 at Uppsala University. A lot of inspiring talks during the first day and a great venue. Looking forward to hearing more on biodiversity genomics and current updates on sequencing technologies in upcoming days.
November 2, 2026 at 7:43 PM
Currently attending a conference on long-read sequencing #LRUA26 at Uppsala University. A lot of inspiring talks during the first day and a great venue. Looking forward to hearing more on biodiversity genomics and current updates on sequencing technologies in upcoming days.
So this explains some of the assembly problems of E. faecium with Illumina sequencing! 😶
Transposable elements are driving rapid adaptation of Enterococcus faecium.
www.nature.com/articles/s41...
www.nature.com/articles/s41...
Transposable elements are driving rapid adaptation of Enterococcus faecium - Nature
Over three decades, rapid expansion of the transposable element ISL3 has reshaped Enterococcus faecium, which helps to explain this pathogen’s growing clinical threat.
www.nature.com
November 3, 2026 at 4:42 PM
So this explains some of the assembly problems of E. faecium with Illumina sequencing! 😶
Automated in situ sequencing using Micro-Manager for microscope control: www.biorxiv.org/content/10.6...
Robust and accessible in situ sequencing with an open-source automated sequencer
Targeted in situ sequencing underlies many spatial transcriptomic, barcoded connectomic, and multiplexed perturbation techniques. Each experiment requires many cycles of chemical reactions and imaging...
www.biorxiv.org
November 2, 2026 at 6:37 PM
Automated in situ sequencing using Micro-Manager for microscope control: www.biorxiv.org/content/10.6...
Sequencing, I think they call it, is really good.
November 2, 2026 at 1:45 AM
Sequencing, I think they call it, is really good.
The Long-Read Sequencing Uppsala workshop is happening tomorrow! Join in remotely with Drs. Caroline Howard and Graeme Oatley from the Tree of Life Programme at the Wellcome Sanger Institute.
This session will be a kick-off for a regular forum to discuss biodiversity sequencing.
lrua.se
This session will be a kick-off for a regular forum to discuss biodiversity sequencing.
lrua.se
Long-Read Sequencing Uppsala, November 2–4, 2026
#LRUA26: Empower your research with long-read sequencing technologies and connect with experts, peers, and industry leaders in Uppsala this November.
lrua.se
November 3, 2026 at 5:05 PM
The Long-Read Sequencing Uppsala workshop is happening tomorrow! Join in remotely with Drs. Caroline Howard and Graeme Oatley from the Tree of Life Programme at the Wellcome Sanger Institute.
This session will be a kick-off for a regular forum to discuss biodiversity sequencing.
lrua.se
This session will be a kick-off for a regular forum to discuss biodiversity sequencing.
lrua.se
Yes agreed that would be an incredibly difficult study to run. Probably impossible to accurately measure effect even with sequencing and similar.
November 3, 2026 at 11:26 PM
Yes agreed that would be an incredibly difficult study to run. Probably impossible to accurately measure effect even with sequencing and similar.
CellWhisperer uses multimodal learning of transcriptomes and text to answer questions about single-cell RNA-sequencing data go.nature.com/3WPGJnW
rdcu.be/TamrmUPBYm6a
rdcu.be/TamrmUPBYm6a
Multimodal learning enables chat-based exploration of single-cell data - Nature Biotechnology
CellWhisperer uses multimodal learning of transcriptomes and text to answer questions about single-cell RNA-sequencing data.
go.nature.com
October 30, 2026 at 1:04 AM
CellWhisperer uses multimodal learning of transcriptomes and text to answer questions about single-cell RNA-sequencing data go.nature.com/3WPGJnW
rdcu.be/TamrmUPBYm6a
rdcu.be/TamrmUPBYm6a
I think he sequenced a 35-yr-old tobamovirus from my lab as an exercise in direct sequencing of human RNA viruses - only no-one had any of those lying around 😁
Meet the team: Contributing Investigator Dr Ruan Marais' research interests include development of novel molecular techniques for infectious disease diagnostics.
#CIDRITeam
#CIDRITeam
November 2, 2026 at 8:07 AM
I think he sequenced a 35-yr-old tobamovirus from my lab as an exercise in direct sequencing of human RNA viruses - only no-one had any of those lying around 😁
Laboratory investigations via full genome sequencing indicated the outbreak likely resulted from a zoonotic spillover.
November 3, 2026 at 7:33 AM
Laboratory investigations via full genome sequencing indicated the outbreak likely resulted from a zoonotic spillover.
Fracture (DiN28) is free to download/name your price for the whole of November. Featuring their fabled retro-style sequencing, courtesy of Mark Shreeve's giant Moog modular system, coupled with a heady mix of quirky melodic lines and spacey atmospheres.
dinrecords.bandcamp.com/album/fractu...
dinrecords.bandcamp.com/album/fractu...
Fracture (DiN28), by ARC
5 track album
dinrecords.bandcamp.com
November 1, 2026 at 9:33 AM
Fracture (DiN28) is free to download/name your price for the whole of November. Featuring their fabled retro-style sequencing, courtesy of Mark Shreeve's giant Moog modular system, coupled with a heady mix of quirky melodic lines and spacey atmospheres.
dinrecords.bandcamp.com/album/fractu...
dinrecords.bandcamp.com/album/fractu...