#Podospora
Our description of the transcriptomic changes during sexual development in #Podospora anserina is out in @genomics.peercommunityin.org ! peercommunityjournal.org/articles/10....
@i2bcparissaclay.bsky.social @univparissaclay.bsky.social
Sexual reproduction is controlled by successive transcriptomic waves in Podospora anserina
peercommunityjournal.org
July 7, 2025 at 5:40 AM
And another preprint this week! 🍄🎉
This time it's about gene expression from fertilization to spores formation in our favorite fungus #Podospora anserina.

#parissaclay #i2bc

www.biorxiv.org/content/10.1...
Sexual reproduction is controlled by successive transcriptomic waves in Podospora anserina
Despite the inherent challenge of finding suitable mating partners, most eukaryotes use sexual reproduction to produce offspring endowed with increase genetic diversity and fitness. The persistence of...
www.biorxiv.org
December 11, 2024 at 11:03 AM
Happy to see this out! "Reconstructing NOD-like receptor alleles with high internal conservation in #Podospora anserina using long-read sequencing", now in ‪@microbiologysociety.org‬! 🧬

Keep reading for a simple explanation 🧵 1/n
#Fungi #Allorecognition
www.microbiologyresearch.org/content/jour...
Reconstructing NOD-like receptor alleles with high internal conservation in Podospora anserina using long-read sequencing
NOD-like receptors (NLRs) are intracellular immune receptors that detect pathogen-associated cues and trigger defence mechanisms, including regulated cell death. In filamentous fungi, some NLRs mediat...
www.microbiologyresearch.org
July 2, 2025 at 6:10 PM
A recent shift in centromere size and DNA content in Podospora pseudocomata co-occurs with the loss of a fungal genome defense system https://www.biorxiv.org/content/10.64898/2025.12.02.690432v1
December 3, 2025 at 2:31 AM
Fast and Tortuous nuclei 😄
journals.asm.org/doi/10.1128/...
Super happy to be part of this story with my friend and colleague Sylvain Brun in @ijmonod.bsky.social !

Have a look at the movies to see nuclei traveling and stretching like crazy;)
Fast and tortuous: extreme deformations and fast movements of the cell nucleus are driven by microtubules in the model fungus Podospora anserina | mBio
Here, using live-cell fluorescence imaging, we report the remarkable and complex behavior of male nuclei during sexual reproduction in the model fungus Podospora anserina. In particular, during their ...
journals.asm.org
September 1, 2026 at 9:03 PM
Happy to share the last #Podospora paper!

With @tatianagiraud.bsky.social we show that the sequence polymorphisms around the mating-type are rather a consequence than the cause of recombination inhibition.

@univparissaclay.bsky.social @i2bcparissaclay.bsky.social @ideevl.bsky.social
Genetic differentiation in the MAT-proximal region is not sufficient for suppressing recombination in Podospora anserina
Abstract. Recombination is advantageous over the long-term, as it allows efficient selection and purging deleterious mutations. Nevertheless, recombination
track.smtpsendmail.com
January 25, 2025 at 12:16 PM
Hi-C data from the filamentous fungus Podospora anserina and associated 3D models to visualize the spatial organization of its chromosomes https://www.biorxiv.org/content/10.64898/2026.06.14.732207v1
June 18, 2026 at 10:35 PM
✍️ The Guichet Lab published a new article

📖 mBio
📃 Fast and tortuous: extreme deformations and fast movements of the cell nucleus are driven by microtubules in the model fungus Podospora anserina

🔗 doi.org/10.1128/mbio...
August 4, 2026 at 12:58 PM
Happy to see our last preprint online! We show that a mysterious recombination inhibition persists even with identical sequences on both mating-type chromosomes in our favorite fungus #Podospora anserina.

www.biorxiv.org/content/10.1...

#universiteparissaclay #i2bc #ideev #cnrs
Genetic differentiation in the MAT-proximal region is not sufficient for suppressing recombination in Podospora anserina
Recombination is advantageous over the long-term, as it allows efficient selection and purging deleterious mutations. Nevertheless, recombination suppression has repeatedly evolved in sex chromosomes and mating-type chromosomes. The evolutionary causes for recombination suppression and the proximal mechanisms preventing crossing overs are still poorly understood. Several hypotheses have recently been suggested based on theoretical models, and in particular, that divergence could accumulate neutrally around a sex-determining region and reduce recombination rates, a self-reinforcing process that could foster progressive extension of recombination suppression. The ascomycete fungus Podospora anserina is an excellent model for investigating these questions. A 0.8 Mb region around the mating-type locus is non-recombining, despite being collinear between the two mating types. This fungus is mostly selfing, so that strains are highly homozygous, except in the non-recombining region around the mating-type locus that displays differentiation between mating types. Here, we generated a mutant to test the hypothesis that sequence divergence alone is responsible for recombination cessation. We replaced the mat- idiomorph by the sequence of the mat+ idiomorph, to obtain a strain that is sexually compatible with the mat-reference strain and isogenic to this strain in the MAT-proximal region. Crosses showed that recombination was still suppressed in the MAT-proximal region in the mutant strains, indicating that other proximal mechanisms than inversions or mere sequence divergence are responsible for recombination suppression in this fungus. This finding suggests that selective mechanisms likely acted for suppressing recombination, as the neutral model does not seem to hold, at least in this fungus. ### Competing Interest Statement The authors have declared no competing interest.
biorxiv.org
December 8, 2024 at 12:53 PM
Genetic differentiation in the MAT-proximal region is not sufficient for suppressing recombination in Podospora anserina https://www.biorxiv.org/content/10.1101/2024.12.03.626592v1
December 8, 2024 at 12:33 AM
Reconstructing NOD-like receptor alleles with high internal conservation in Podospora anserina using long-read sequencing https://www.biorxiv.org/content/10.1101/2025.01.13.632504v1
January 16, 2025 at 8:48 AM
It's out!! Using population and comparative genomics of Podospora fungi, we show that a class of genes called #NLRs display evolutionary signatures that are consistent with an immune function, much like in plants and animals! 1/n 🍄
#popgen #balancingselection #introgression

doi.org/10.1093/gbe/...
NOD-Like Receptor Genes Undergo Diversity-Enhancing Evolution in a Fungal Species Complex
Abstract. Fungi harbor diverse arrays of genes encoding NOD-like receptors (NLRs), key intracellular immune proteins found in plants, animals, and bacteria
doi.org
August 7, 2026 at 9:49 PM
We wrote a review in a slightly different, lighthearted style 😁.
"Starship Discovery: A Collaborative Approach to Uncover Massive Transposable Elements" 🚀🧬

Thank you and congratulations to the coauthors!
#fungi #genomics #transposons #science #Podospora

link.springer.com/chapter/10.1...
Starship Discovery: A Collaborative Approach to Uncover Massive Transposable Elements
The ability to generate high-quality fungal genomes brought with it new frontiers of scientific discovery and paved the way for answering outstanding biological mysteries. Recently, several independen...
link.springer.com
December 23, 2024 at 3:53 PM
Sexual reproduction is controlled by successive transcriptomic waves in Podospora anserina https://www.biorxiv.org/content/10.1101/2024.12.09.627484v1
December 11, 2024 at 10:34 AM
That sounds fine, too. Do you know the Podospora anserina story? It’s wonderful.

pubmed.ncbi.nlm.nih.gov/7407910/

www.cell.com/trends/micro...
Podospora anserina
Podospora anserina is a coprophilous ascomycete fungus that has been used as a model organism since the 1930s. It has been reported from numerous types of herbivore dung globally, but recent genetic a...
www.cell.com
May 22, 2026 at 1:35 PM
Next, @fungage-lab.bsky.social on one of my favorite topics: starships 🚀 first, covering the discovery of unprecedentedly large mobile elements in Podospora. Shout out to @loreament.bsky.social, here with us in spirit
#ecfg17
March 4, 2025 at 11:54 AM
Sexual reproduction is controlled by successive transcriptomic waves in Podospora anserina https://www.biorxiv.org/content/10.1101/2024.12.09.627484v1
December 11, 2024 at 10:34 AM