We sequenced some new #genomes!
Novel high-quality #amoeba genomes reveal widespread #codonUsage mismatch between #giantViruses and their hosts.
doi.org/10.1101/2024...
#ProtistsOnSky #MicroSky 🖥️🧬
1/4
Novel high-quality #amoeba genomes reveal widespread #codonUsage mismatch between #giantViruses and their hosts.
doi.org/10.1101/2024...
#ProtistsOnSky #MicroSky 🖥️🧬
1/4
October 25, 2024 at 1:03 PM
We sequenced some new #genomes!
Novel high-quality #amoeba genomes reveal widespread #codonUsage mismatch between #giantViruses and their hosts.
doi.org/10.1101/2024...
#ProtistsOnSky #MicroSky 🖥️🧬
1/4
Novel high-quality #amoeba genomes reveal widespread #codonUsage mismatch between #giantViruses and their hosts.
doi.org/10.1101/2024...
#ProtistsOnSky #MicroSky 🖥️🧬
1/4
New preprint: #Salmonella virulence genes may use a stress-adapted codon bias to sustain translation under infection-like conditions.
📖 shorturl.at/8QiGO
✍️ Frédéric Goormaghtigh & Dirk Bumann
@ulbruxelles.bsky.social
@biozentrum.unibas.ch
#Microsky #CodonUsage #Translation #BacterialPathogenesis
📖 shorturl.at/8QiGO
✍️ Frédéric Goormaghtigh & Dirk Bumann
@ulbruxelles.bsky.social
@biozentrum.unibas.ch
#Microsky #CodonUsage #Translation #BacterialPathogenesis
June 19, 2026 at 3:14 AM
New preprint: #Salmonella virulence genes may use a stress-adapted codon bias to sustain translation under infection-like conditions.
📖 shorturl.at/8QiGO
✍️ Frédéric Goormaghtigh & Dirk Bumann
@ulbruxelles.bsky.social
@biozentrum.unibas.ch
#Microsky #CodonUsage #Translation #BacterialPathogenesis
📖 shorturl.at/8QiGO
✍️ Frédéric Goormaghtigh & Dirk Bumann
@ulbruxelles.bsky.social
@biozentrum.unibas.ch
#Microsky #CodonUsage #Translation #BacterialPathogenesis
Signature codon usage patterns define functional gene families, this is in yeast and could be also very informative for bacteria and link with tRNA modifs #rnasky #codonusage #rnabiology #rnamodifications
Synonymous codon usage defines functional gene families - BMC Biology
Background The degeneracy of the genetic code is increasingly recognized for roles in regulating translation rate, protein folding, and cell response. However, the functional genomics of codon usage p...
link.springer.com
January 30, 2026 at 12:43 PM
Signature codon usage patterns define functional gene families, this is in yeast and could be also very informative for bacteria and link with tRNA modifs #rnasky #codonusage #rnabiology #rnamodifications
🔗 Ready to analyze your codon usage? GCUA makes sophisticated codon bias analysis accessible to everyone.
#Bioinformatics #CodingSequences #CodonUsage #Python #Genomics #MolecularEvolution #SyntheticBiology #GeneExpression #Optimization
#Bioinformatics #CodingSequences #CodonUsage #Python #Genomics #MolecularEvolution #SyntheticBiology #GeneExpression #Optimization
June 1, 2025 at 7:28 PM
🔗 Ready to analyze your codon usage? GCUA makes sophisticated codon bias analysis accessible to everyone.
#Bioinformatics #CodingSequences #CodonUsage #Python #Genomics #MolecularEvolution #SyntheticBiology #GeneExpression #Optimization
#Bioinformatics #CodingSequences #CodonUsage #Python #Genomics #MolecularEvolution #SyntheticBiology #GeneExpression #Optimization
Excited to share our new paper in BMC Bioinformatics! We present RSCUcaller, a user-friendly R package to analyze synonymous codon usage bias. It's a versatile tool for genomics & molecular biology research. #RStats #Bioinformatics #CodonUsage bmcbioinformatics.biomedcentral.com/articles/10....
RSCUcaller: an R package for analyzing differences in relative synonymous codon usage (RSCU) - BMC Bioinformatics
Background Synonymous codon usage bias, a significant factor in gene expression and genome evolution, was extensively studied in genomics and molecular biology. Although the genetic code is universal,...
bmcbioinformatics.biomedcentral.com
June 15, 2025 at 7:44 PM
Excited to share our new paper in BMC Bioinformatics! We present RSCUcaller, a user-friendly R package to analyze synonymous codon usage bias. It's a versatile tool for genomics & molecular biology research. #RStats #Bioinformatics #CodonUsage bmcbioinformatics.biomedcentral.com/articles/10....