and "Convergent genomic evolution of human gut bacteria along an industrialization gradient" www.cell.com/cell/fulltex... in @cellpress.bsky.social
🌍🦠💩🎉
🌍🦠💩🎉
Convergent genomic evolution of human gut bacteria along an industrialization gradient
Analysis of globally diverse gut bacterial isolate genomes shows that host environments
across the industrialization gradient shape genome remodeling and convergent selection,
while industrialization ...
www.cell.com
November 2, 2026 at 5:43 PM
and "Convergent genomic evolution of human gut bacteria along an industrialization gradient" www.cell.com/cell/fulltex... in @cellpress.bsky.social
🌍🦠💩🎉
🌍🦠💩🎉
New online! The genomic and epigenomic evolution of colorectal cancer
The genomic and epigenomic evolution of colorectal cancer
Nature Reviews Gastroenterology & Hepatology, Published online: 02 November 2026; doi:10.1038/s41575-026-01265-xThis Review describes the genomic and epigenomic evolution of colorectal cancer, and the implications of evolutionary mechanisms for treatment strategies and patient management.
dlvr.it
November 2, 2026 at 4:45 PM
New online! The genomic and epigenomic evolution of colorectal cancer
Super happy our DominL paper is online at Nature Communications! We used Neanderthal ancestry to tackle a long standing challenge in human genetics: identifying regions enriched for recessive deleterious mutations, and we found that they are up to 9% of the genome www.nature.com/articles/s41...
Neanderthal introgressed ancestry reveals human genomic regions enriched with recessive deleterious mutations - Nature Communications
Here the authors use Neanderthal ancestry and machine learning to identify human genomic regions enriched for deleterious recessive mutations, revealing a non-uniform landscape of recessive mutations ...
www.nature.com
November 2, 2026 at 4:16 PM
Super happy our DominL paper is online at Nature Communications! We used Neanderthal ancestry to tackle a long standing challenge in human genetics: identifying regions enriched for recessive deleterious mutations, and we found that they are up to 9% of the genome www.nature.com/articles/s41...
Tandem repeats in methanogenic archaea and their viruses reveal a shared potential for rapid genomic diversification https://www.biorxiv.org/content/10.64898/2026.10.30.763056v1
November 3, 2026 at 1:20 PM
Tandem repeats in methanogenic archaea and their viruses reveal a shared potential for rapid genomic diversification https://www.biorxiv.org/content/10.64898/2026.10.30.763056v1
Collaborative work led by @wrad07.bsky.social w/ @texasparkswildlife.bsky.social @tamueccb.bsky.social - we generated a reference genome for Hypostomus & used whole genome sequencing to examine population structure of invasive suckermouth armored catfish in TX onlinelibrary.wiley.com/doi/10.1111/...
The Genomic Complexity of Invasion: Cryptic Lineages, Founder Effects and Sex Determination in Armoured Catfish
Genetic biocontrol approaches offer promising tools for managing invasive species. However, their success depends on species identity, demographic history and the genomic architecture of sex determin...
onlinelibrary.wiley.com
October 31, 2026 at 6:46 PM
Collaborative work led by @wrad07.bsky.social w/ @texasparkswildlife.bsky.social @tamueccb.bsky.social - we generated a reference genome for Hypostomus & used whole genome sequencing to examine population structure of invasive suckermouth armored catfish in TX onlinelibrary.wiley.com/doi/10.1111/...
Each flowerpot snake is born from an unfertilized egg via "premeiotic endoreplication". She's a genetic clone of her mother. We call this 'parthenogenesis'.
And each cell in her body will have *3* copies of her genome, which is very unusual.
What we think happened: about 41 million years ago...
And each cell in her body will have *3* copies of her genome, which is very unusual.
What we think happened: about 41 million years ago...
Genomic insights into evolution of parthenogenesis and triploidy in the flowerpot snake
The genome of the flowerpot snake provides insights into triploid formation and parthenogenetic reproduction.
www.science.org
November 3, 2026 at 2:00 PM
Each flowerpot snake is born from an unfertilized egg via "premeiotic endoreplication". She's a genetic clone of her mother. We call this 'parthenogenesis'.
And each cell in her body will have *3* copies of her genome, which is very unusual.
What we think happened: about 41 million years ago...
And each cell in her body will have *3* copies of her genome, which is very unusual.
What we think happened: about 41 million years ago...
Genomic study discovers that Native Hawaiians and Easter Islanders came from same ancient ‘ultravoyager’ group.
www.livescience.com/archaeology/...
www.livescience.com/archaeology/...
Native Hawaiians and Easter Islanders came from same 'ultravoyager' group
Members of the same people who settled Easter Island also discovered Hawaii, a new study finds.
www.livescience.com
November 1, 2026 at 10:13 PM
Genomic study discovers that Native Hawaiians and Easter Islanders came from same ancient ‘ultravoyager’ group.
www.livescience.com/archaeology/...
www.livescience.com/archaeology/...
Genome-guided characterization of Nocardiopsis lopnurensis sp. nov. & genomic features potentially associated with halotolerance & alkalitolerance
New Nocardiopsis species from Lop Nur shows genomic traits linked to salt & alkali tolerance
www.sciencedirect.com/science/arti... #OpenAccess #MicroSky
New Nocardiopsis species from Lop Nur shows genomic traits linked to salt & alkali tolerance
www.sciencedirect.com/science/arti... #OpenAccess #MicroSky
October 31, 2026 at 4:57 PM
Genome-guided characterization of Nocardiopsis lopnurensis sp. nov. & genomic features potentially associated with halotolerance & alkalitolerance
New Nocardiopsis species from Lop Nur shows genomic traits linked to salt & alkali tolerance
www.sciencedirect.com/science/arti... #OpenAccess #MicroSky
New Nocardiopsis species from Lop Nur shows genomic traits linked to salt & alkali tolerance
www.sciencedirect.com/science/arti... #OpenAccess #MicroSky
Genomic Prediction is transforming genetics research. 🧬
#GSA welcomes submissions exploring new methods, benchmarking challenges, environmental impacts, and community insights in genomic prediction. Share your research and advance the conversation.
🔗 oxford.ly/3U4Gckj
#GSA welcomes submissions exploring new methods, benchmarking challenges, environmental impacts, and community insights in genomic prediction. Share your research and advance the conversation.
🔗 oxford.ly/3U4Gckj
November 1, 2026 at 4:02 PM
Genomic Prediction is transforming genetics research. 🧬
#GSA welcomes submissions exploring new methods, benchmarking challenges, environmental impacts, and community insights in genomic prediction. Share your research and advance the conversation.
🔗 oxford.ly/3U4Gckj
#GSA welcomes submissions exploring new methods, benchmarking challenges, environmental impacts, and community insights in genomic prediction. Share your research and advance the conversation.
🔗 oxford.ly/3U4Gckj
Highlight on our recent paper on the genomic signatures of cold adaptation in Antarctic notothenioid fish in Genome Biology 🐟 🧬
#FishGenomics #ColdAdaptation
link.springer.com/article/10.1...
#FishGenomics #ColdAdaptation
link.springer.com/article/10.1...
📣 #Forschungsnews: Wie überleben Fische bei -1,9 °C? 🐟❄️ Neue Studie unter Leitung von Iliana Bista zeigt: Frostschutzproteine, „springende Gene“ und weitere genetische Anpassungen helfen Antarktisfischen, extremer Kälte zu trotzen. 🧬
👉 https://sgn.one/6pj
📷 BAS / Brockington
👉 https://sgn.one/6pj
📷 BAS / Brockington
November 2, 2026 at 8:32 AM
Highlight on our recent paper on the genomic signatures of cold adaptation in Antarctic notothenioid fish in Genome Biology 🐟 🧬
#FishGenomics #ColdAdaptation
link.springer.com/article/10.1...
#FishGenomics #ColdAdaptation
link.springer.com/article/10.1...
Learn Retrieving Genomic Data From Ensembl (Free Seminar) at your own pace!
#Research #Instats
Full details and registration in the first reply.
#Research #Instats
Full details and registration in the first reply.
November 2, 2026 at 6:44 PM
Learn Retrieving Genomic Data From Ensembl (Free Seminar) at your own pace!
#Research #Instats
Full details and registration in the first reply.
#Research #Instats
Full details and registration in the first reply.
ICYMI: New online! The genomic and epigenomic evolution of colorectal cancer
The genomic and epigenomic evolution of colorectal cancer
Nature Reviews Gastroenterology & Hepatology, Published online: 02 November 2026; doi:10.1038/s41575-026-01265-xThis Review describes the genomic and epigenomic evolution of colorectal cancer, and the implications of evolutionary mechanisms for treatment strategies and patient management.
dlvr.it
November 3, 2026 at 4:45 PM
ICYMI: New online! The genomic and epigenomic evolution of colorectal cancer
Now online! Convergent genomic evolution of human gut bacteria along an industrialization gradient
Convergent genomic evolution of human gut bacteria along an industrialization gradient
Analysis of globally diverse gut bacterial isolate genomes shows that host environments across the industrialization gradient shape genome remodeling and convergent selection, while industrialization is linked to increased HGT-driven gene acquisition and expanded genome size.
dlvr.it
November 3, 2026 at 1:41 PM
Now online! Convergent genomic evolution of human gut bacteria along an industrialization gradient
Genomic structural variations distinguishing archaic and modern humans are associated with neurodevelopment www.cell.com/iscience/ful...
Genomic structural variations distinguishing archaic and modern humans are associated with neurodevelopment
Genomics; Evolutionary biology
www.cell.com
November 1, 2026 at 12:15 PM
Genomic structural variations distinguishing archaic and modern humans are associated with neurodevelopment www.cell.com/iscience/ful...
New in JB: Janet-Maitre & Feldman review how Acinetobacter baumannii, in the absence of many classical virulence factors, uses “persist and resist” strategy, including genomic and metabolic flexibility, to cause disease.
journals.asm.org/doi/10.1128/...
@asm.org #JBacteriol @microsky.bsky.social
journals.asm.org/doi/10.1128/...
@asm.org #JBacteriol @microsky.bsky.social
November 3, 2026 at 3:32 PM
New in JB: Janet-Maitre & Feldman review how Acinetobacter baumannii, in the absence of many classical virulence factors, uses “persist and resist” strategy, including genomic and metabolic flexibility, to cause disease.
journals.asm.org/doi/10.1128/...
@asm.org #JBacteriol @microsky.bsky.social
journals.asm.org/doi/10.1128/...
@asm.org #JBacteriol @microsky.bsky.social
Plus d’1/4 des neurones prélevés sur des fœtus humains présentent une anomalie chromosomique.
Seuls 6 % subsistent dans le cerveau des nouveau-nés.
Il y aurait donc un mécanisme permettant de réguler le nombre de neurones déficients et déterminer lesquels sont autorisés à subsister dans le cerveau
Seuls 6 % subsistent dans le cerveau des nouveau-nés.
Il y aurait donc un mécanisme permettant de réguler le nombre de neurones déficients et déterminer lesquels sont autorisés à subsister dans le cerveau
Perinatal elimination of genetically aberrant human cortical neurons - Nature
Single-neuron sequencing shows that widespread genomic abnormalities are common prenatally but largely eliminated around birth, indicating developmental genome quality control in human neurons.
www.nature.com
November 3, 2026 at 10:16 AM
Plus d’1/4 des neurones prélevés sur des fœtus humains présentent une anomalie chromosomique.
Seuls 6 % subsistent dans le cerveau des nouveau-nés.
Il y aurait donc un mécanisme permettant de réguler le nombre de neurones déficients et déterminer lesquels sont autorisés à subsister dans le cerveau
Seuls 6 % subsistent dans le cerveau des nouveau-nés.
Il y aurait donc un mécanisme permettant de réguler le nombre de neurones déficients et déterminer lesquels sont autorisés à subsister dans le cerveau
Advancing Clinical Genomic Analysis with a Skill-Centred Agent
Qiaoyu Zheng et al.
#arXiv #cs.AI #q-bio.GN
Qiaoyu Zheng et al.
#arXiv #cs.AI #q-bio.GN
Advancing Clinical Genomic Analysis with a Skill-Centred Agent
Clinical genomic analysis requires experts to integrate evolving guidelines, databases, and computational evidence. As sequencing has become increasingly accessible, this complex and labor-intensive process has become a major bottleneck to the timely use of genomic information in clinical decision-…
arxiv.org
October 31, 2026 at 8:58 PM
Genomic erosion across avifauna in a biodiversity hotspot sounds a conservation alarm | Science www.science.org/doi/10.1126/...
Genomic erosion across avifauna in a biodiversity hotspot sounds a conservation alarm
Loss of biodiversity can have a hidden dimension—the cryptic erosion of genetic diversity even in the face of apparent species resilience. We quantified changes in genetic diversity by comparing histo...
www.science.org
November 2, 2026 at 5:15 AM
Genomic erosion across avifauna in a biodiversity hotspot sounds a conservation alarm | Science www.science.org/doi/10.1126/...
Early Gravettian genomic data from Western Europe reveal population movements before the LGM www.science.org/doi/10.1126/...
Early Gravettian genomic data from Western Europe reveal population movements before the LGM
Anatomically modern humans first settled in Europe at least 45,000 years ago, yet limited genomic data from 45 to 20 thousand years (ka) constrain reconstructions of Upper Palaeolithic population…
www.science.org
November 1, 2026 at 8:17 AM
Early Gravettian genomic data from Western Europe reveal population movements before the LGM www.science.org/doi/10.1126/...
I'm a bit puzzled by these large declines in diversity in common species. Yes, there numbers have declined but losing 40% of species diversity in 20 generations would imply Ne's on the order of 10s.
www.science.org/doi/10.1126/...
www.science.org/doi/10.1126/...
Genomic erosion across avifauna in a biodiversity hotspot sounds a conservation alarm
Loss of biodiversity can have a hidden dimension—the cryptic erosion of genetic diversity even in the face of apparent species resilience. We quantified changes in genetic diversity by comparing histo...
www.science.org
November 2, 2026 at 6:46 PM
I'm a bit puzzled by these large declines in diversity in common species. Yes, there numbers have declined but losing 40% of species diversity in 20 generations would imply Ne's on the order of 10s.
www.science.org/doi/10.1126/...
www.science.org/doi/10.1126/...
Pathotypr identifica los 14 linajes/clados del complejo M. tuberculosis, incluidos los raros. Detecta mutaciones de resistencia, infecciones mixtas y la referencia más cercana, sin alineamiento.
doi.org/10.3201/eid3...
doi.org/10.3201/eid3...
Alignment-Free Tool for Assemblies and Reads in Genomic Surveillance of Tuberculosis
Tool for Genomic Surveillance of Tuberculosis
doi.org
November 1, 2026 at 7:01 PM
Pathotypr identifica los 14 linajes/clados del complejo M. tuberculosis, incluidos los raros. Detecta mutaciones de resistencia, infecciones mixtas y la referencia más cercana, sin alineamiento.
doi.org/10.3201/eid3...
doi.org/10.3201/eid3...
🌱 New research in #G3journal shows that gene family evolution in #Arabidopsis is governed by a combination of conserved birth–death dynamics and lineage-specific genomic processes.
🔗 buff.ly/8lA0OWl
🔗 buff.ly/8lA0OWl
November 2, 2026 at 7:04 PM
🌱 New research in #G3journal shows that gene family evolution in #Arabidopsis is governed by a combination of conserved birth–death dynamics and lineage-specific genomic processes.
🔗 buff.ly/8lA0OWl
🔗 buff.ly/8lA0OWl
Convergent genomic evolution of human gut bacteria along an industrialization gradient - www.cell.com/cell/fulltex... 🌎🧪 #Medsky
Convergent genomic evolution of human gut bacteria along an industrialization gradient
Analysis of globally diverse gut bacterial isolate genomes shows that host environments
across the industrialization gradient shape genome remodeling and convergent selection,
while industrialization ...
www.cell.com
November 2, 2026 at 7:02 PM
Convergent genomic evolution of human gut bacteria along an industrialization gradient - www.cell.com/cell/fulltex... 🌎🧪 #Medsky
Don't forget, successful application of any piece/gene/metabolite/etc requires a full understanding of any and all conditionalities that may affect function.
So GxE, niche breadth, fluctuating selection, genomic background, community composition,....
So GxE, niche breadth, fluctuating selection, genomic background, community composition,....
November 3, 2026 at 5:45 PM
Don't forget, successful application of any piece/gene/metabolite/etc requires a full understanding of any and all conditionalities that may affect function.
So GxE, niche breadth, fluctuating selection, genomic background, community composition,....
So GxE, niche breadth, fluctuating selection, genomic background, community composition,....