Applied to fibroblasts and neuron like cells, conserved m6A placement emerges.
Stoichiometry shifts are real, and defensible, because controls support them.
#Trinobia #Bioinformatics #NanoporeSequencing #Epitranscriptomics #ScientificMethods #Research
Stoichiometry shifts are real, and defensible, because controls support them.
#Trinobia #Bioinformatics #NanoporeSequencing #Epitranscriptomics #ScientificMethods #Research
May 13, 2026 at 6:04 PM
Applied to fibroblasts and neuron like cells, conserved m6A placement emerges.
Stoichiometry shifts are real, and defensible, because controls support them.
#Trinobia #Bioinformatics #NanoporeSequencing #Epitranscriptomics #ScientificMethods #Research
Stoichiometry shifts are real, and defensible, because controls support them.
#Trinobia #Bioinformatics #NanoporeSequencing #Epitranscriptomics #ScientificMethods #Research
Understanding the Impact of Individual Nucleotide on Oxford Nanopore Current Signals With Interpretable Prediction Models
Bioinformatics and Biology Insights
@journals.sagepub.com
journals.sagepub.com/doi/10.1177/...
#nanoporesequencing #bioinformatics #DNAsequencing #MachineLearning #openaccess
Bioinformatics and Biology Insights
@journals.sagepub.com
journals.sagepub.com/doi/10.1177/...
#nanoporesequencing #bioinformatics #DNAsequencing #MachineLearning #openaccess
October 3, 2025 at 9:41 PM
Understanding the Impact of Individual Nucleotide on Oxford Nanopore Current Signals With Interpretable Prediction Models
Bioinformatics and Biology Insights
@journals.sagepub.com
journals.sagepub.com/doi/10.1177/...
#nanoporesequencing #bioinformatics #DNAsequencing #MachineLearning #openaccess
Bioinformatics and Biology Insights
@journals.sagepub.com
journals.sagepub.com/doi/10.1177/...
#nanoporesequencing #bioinformatics #DNAsequencing #MachineLearning #openaccess
It’s incredibly gratifying to see our work on Direct RNA sequencing getting recognised in this way. Congratulations to all the team at @oxfordnanopore.bsky.social who helped us to make it a reality!
www.the-scientist.com/2024-top-10-...
#RNASequencing #Innovation #NanoporeSequencing #RNAResearch
www.the-scientist.com/2024-top-10-...
#RNASequencing #Innovation #NanoporeSequencing #RNAResearch
2024 Top 10 Innovations
The latest group of winning technologies has a little something for everyone—from scientists at the lab bench to those in the clinic and even the classroom.
www.the-scientist.com
December 14, 2024 at 10:25 AM
It’s incredibly gratifying to see our work on Direct RNA sequencing getting recognised in this way. Congratulations to all the team at @oxfordnanopore.bsky.social who helped us to make it a reality!
www.the-scientist.com/2024-top-10-...
#RNASequencing #Innovation #NanoporeSequencing #RNAResearch
www.the-scientist.com/2024-top-10-...
#RNASequencing #Innovation #NanoporeSequencing #RNAResearch
Kicking off my BlueSky account with a 🚨 new paper alert!!
Thrilled to share that my final PhD paper is now out in Nature Medicine @natmedicine.bsky.social 🎉
🔗 www.nature.com/articles/s41...
#MethylationClassification #MolecularDiagnostics #CNSTumours #NanoporeSequencing
Thrilled to share that my final PhD paper is now out in Nature Medicine @natmedicine.bsky.social 🎉
🔗 www.nature.com/articles/s41...
#MethylationClassification #MolecularDiagnostics #CNSTumours #NanoporeSequencing
Prospective, multicenter validation of a platform for rapid molecular profiling of central nervous system tumors - Nature Medicine
Application of a nanopore sequencing workflow for real-time analysis of brain tumors results in molecular classification within a 30-minute intraoperative window, followed by comprehensive profiling w...
www.nature.com
March 25, 2025 at 2:13 PM
Kicking off my BlueSky account with a 🚨 new paper alert!!
Thrilled to share that my final PhD paper is now out in Nature Medicine @natmedicine.bsky.social 🎉
🔗 www.nature.com/articles/s41...
#MethylationClassification #MolecularDiagnostics #CNSTumours #NanoporeSequencing
Thrilled to share that my final PhD paper is now out in Nature Medicine @natmedicine.bsky.social 🎉
🔗 www.nature.com/articles/s41...
#MethylationClassification #MolecularDiagnostics #CNSTumours #NanoporeSequencing
De novo protein sequencing is of clinical relevance but quite challenging, could single-molecule #nanoporesequencing offer the solution? ➡️ www.nature.com/articles/s41...
Toward single-molecule protein sequencing using nanopores - Nature Biotechnology
Maglia and colleagues discuss advances in nanopore technology en route to single-molecule protein sequencing
www.nature.com
March 31, 2025 at 6:30 AM
De novo protein sequencing is of clinical relevance but quite challenging, could single-molecule #nanoporesequencing offer the solution? ➡️ www.nature.com/articles/s41...
🏆 Ryan Lab success at London Calling 2026!
Huge congratulations to Eleanor and Steven, whose telomere-to-telomere chromosome assembly work using nanopore sequencing was recognised with a Spotlight talk win and a Highly Commended Poster award.
#NanoporeSequencing #Genomics #ChildhoodCancerResearch
Huge congratulations to Eleanor and Steven, whose telomere-to-telomere chromosome assembly work using nanopore sequencing was recognised with a Spotlight talk win and a Highly Commended Poster award.
#NanoporeSequencing #Genomics #ChildhoodCancerResearch
June 1, 2026 at 8:39 AM
🏆 Ryan Lab success at London Calling 2026!
Huge congratulations to Eleanor and Steven, whose telomere-to-telomere chromosome assembly work using nanopore sequencing was recognised with a Spotlight talk win and a Highly Commended Poster award.
#NanoporeSequencing #Genomics #ChildhoodCancerResearch
Huge congratulations to Eleanor and Steven, whose telomere-to-telomere chromosome assembly work using nanopore sequencing was recognised with a Spotlight talk win and a Highly Commended Poster award.
#NanoporeSequencing #Genomics #ChildhoodCancerResearch
There were only two sequences in NCBI Genbank that had ITS sequences for this species, and both only included ITS2, not ITS1.
So once this gets uploaded to genbank, it'll be a real expansion to the available reference database.
I'm far too excited about this
#mycology #fungi #nanoporesequencing
So once this gets uploaded to genbank, it'll be a real expansion to the available reference database.
I'm far too excited about this
#mycology #fungi #nanoporesequencing
December 4, 2024 at 1:52 AM
There were only two sequences in NCBI Genbank that had ITS sequences for this species, and both only included ITS2, not ITS1.
So once this gets uploaded to genbank, it'll be a real expansion to the available reference database.
I'm far too excited about this
#mycology #fungi #nanoporesequencing
So once this gets uploaded to genbank, it'll be a real expansion to the available reference database.
I'm far too excited about this
#mycology #fungi #nanoporesequencing
🧬 Dive into Puerto Rico's first Nanopore Sequencing Symposium! Scientists shared their research with the Oxford Nanopore user community, co-hosted by Arecibo C3 and partner institutions. 📡
#AreciboC3 #NanoporeSequencing #PRScienceTrust
#AreciboC3 #NanoporeSequencing #PRScienceTrust
September 12, 2026 at 1:01 PM
🧬 Dive into Puerto Rico's first Nanopore Sequencing Symposium! Scientists shared their research with the Oxford Nanopore user community, co-hosted by Arecibo C3 and partner institutions. 📡
#AreciboC3 #NanoporeSequencing #PRScienceTrust
#AreciboC3 #NanoporeSequencing #PRScienceTrust
Single-molecule direct RNA sequencing reveals the shaping of epitranscriptome across multiple species. #DirectRNAseq #Epitranscriptomics #SingleMoleculeSequencing #NanoporeSequencing
@nanoporetech.com @natcomms.nature.com
www.nature.com/articles/s41...
@nanoporetech.com @natcomms.nature.com
www.nature.com/articles/s41...
Single-molecule direct RNA sequencing reveals the shaping of epitranscriptome across multiple species - Nature Communications
Nanopore direct RNA sequencing is promising for epitranscriptome study but remains limited in single-molecule resolution. Here, the authors develop SingleMod, a tool for accurate single-molecule m6A…
www.nature.com
June 4, 2025 at 9:15 AM
Single-molecule direct RNA sequencing reveals the shaping of epitranscriptome across multiple species. #DirectRNAseq #Epitranscriptomics #SingleMoleculeSequencing #NanoporeSequencing
@nanoporetech.com @natcomms.nature.com
www.nature.com/articles/s41...
@nanoporetech.com @natcomms.nature.com
www.nature.com/articles/s41...
New TB genomics study! Culture-free Mycobacterium tuberculosis WGS using nanopore sequencing directly from sputum. Faster, simpler, and actionable for public health.
biorxiv.org/content/10.1101/2025.09.23.678181v1
#NanoporeSequencing #Genomics #TB
biorxiv.org/content/10.1101/2025.09.23.678181v1
#NanoporeSequencing #Genomics #TB
Direct nanopore sequencing of M. tuberculosis on sputa and rescue of suboptimal results to enhance transmission surveillance
Whole-genome sequencing (WGS) enhances precision in predicting antimicrobial resistance and tracking Mycobacterium tuberculosis (MTB) transmission. Due to MTB’s slow-growing nature, genomic results…
www.biorxiv.org
October 8, 2025 at 7:24 PM
New TB genomics study! Culture-free Mycobacterium tuberculosis WGS using nanopore sequencing directly from sputum. Faster, simpler, and actionable for public health.
biorxiv.org/content/10.1101/2025.09.23.678181v1
#NanoporeSequencing #Genomics #TB
biorxiv.org/content/10.1101/2025.09.23.678181v1
#NanoporeSequencing #Genomics #TB
New tool: segSHAPE. It fixes alignment by using Dorado's basecaller move table as a prior constraint, then learns position-specific k-mer signal models instead of assuming one k-mer = one signal everywhere.
#NanoporeSequencing #RNAStructure
#NanoporeSequencing #RNAStructure
June 19, 2026 at 6:07 PM
New tool: segSHAPE. It fixes alignment by using Dorado's basecaller move table as a prior constraint, then learns position-specific k-mer signal models instead of assuming one k-mer = one signal everywhere.
#NanoporeSequencing #RNAStructure
#NanoporeSequencing #RNAStructure
Register for our free event #MaxwellInFocus - 9 June 2026, London: https://ow.ly/hCzv50YWKPe
Speaker Iman Awadh, Royal Marsden - Maxwell and ONT optimisation for diagnostic use. A practical session for labs at the intersection of automated extraction and long-read sequencing
#NanoporeSequencing
Speaker Iman Awadh, Royal Marsden - Maxwell and ONT optimisation for diagnostic use. A practical session for labs at the intersection of automated extraction and long-read sequencing
#NanoporeSequencing
June 1, 2026 at 8:05 AM
Register for our free event #MaxwellInFocus - 9 June 2026, London: https://ow.ly/hCzv50YWKPe
Speaker Iman Awadh, Royal Marsden - Maxwell and ONT optimisation for diagnostic use. A practical session for labs at the intersection of automated extraction and long-read sequencing
#NanoporeSequencing
Speaker Iman Awadh, Royal Marsden - Maxwell and ONT optimisation for diagnostic use. A practical session for labs at the intersection of automated extraction and long-read sequencing
#NanoporeSequencing
Fantastic to host Nerea. Great progress. Especially thanks to Isabel.
www.linkedin.com/posts/earlha...
www.linkedin.com/posts/earlha...
Earlham Institute on LinkedIn: #collaboration #nanoporesequencing #dnareplication #bioinformatic
Science couldn’t happen without #collaboration and we often welcome visitors to the Earlham Institute.
We recently welcomed Nerea Murugarren to the…
www.linkedin.com
November 16, 2024 at 9:28 AM
Fantastic to host Nerea. Great progress. Especially thanks to Isabel.
www.linkedin.com/posts/earlha...
www.linkedin.com/posts/earlha...
Exciting short communication by Bessette et al.
High-throughput detection of microeukaryotic parasites in insects using Nanopore sequencing
tinyurl.com/2s3j39u3
#Agriculture
#MicroSporidia
#ProtistParasite
#Sequencing
#ThirdGenerationSequencing
#CropResistance
#NanoporeSequencing
High-throughput detection of microeukaryotic parasites in insects using Nanopore sequencing
tinyurl.com/2s3j39u3
#Agriculture
#MicroSporidia
#ProtistParasite
#Sequencing
#ThirdGenerationSequencing
#CropResistance
#NanoporeSequencing
tinyurl.com
August 26, 2026 at 12:25 PM
Exciting short communication by Bessette et al.
High-throughput detection of microeukaryotic parasites in insects using Nanopore sequencing
tinyurl.com/2s3j39u3
#Agriculture
#MicroSporidia
#ProtistParasite
#Sequencing
#ThirdGenerationSequencing
#CropResistance
#NanoporeSequencing
High-throughput detection of microeukaryotic parasites in insects using Nanopore sequencing
tinyurl.com/2s3j39u3
#Agriculture
#MicroSporidia
#ProtistParasite
#Sequencing
#ThirdGenerationSequencing
#CropResistance
#NanoporeSequencing
Нанопора измерила верность искусственных букв ДНК: более 98,6% на цикл для B≡S и опыт с алфавитом ATGCBSPZ. Киберхимик EASY Азот — о карте ошибок.
#SyntheticBiology #NanoporeSequencing
https://easy-tm.com/news/nanopora-izmerila-tochnost-kopirovaniya-dnk-s-vosemyu-bukvami/
#SyntheticBiology #NanoporeSequencing
https://easy-tm.com/news/nanopora-izmerila-tochnost-kopirovaniya-dnk-s-vosemyu-bukvami/
Нанопора измерила точность копирования ДНК с восемью буквами
Нанопоровое секвенирование и машинное обучение измерили сохранение искусственных пар оснований; для B≡S точность превысила 98,6% на цикл.
easy-tm.com
August 25, 2026 at 2:30 AM
Нанопора измерила верность искусственных букв ДНК: более 98,6% на цикл для B≡S и опыт с алфавитом ATGCBSPZ. Киберхимик EASY Азот — о карте ошибок.
#SyntheticBiology #NanoporeSequencing
https://easy-tm.com/news/nanopora-izmerila-tochnost-kopirovaniya-dnk-s-vosemyu-bukvami/
#SyntheticBiology #NanoporeSequencing
https://easy-tm.com/news/nanopora-izmerila-tochnost-kopirovaniya-dnk-s-vosemyu-bukvami/
Meet one of our #MaxwellInFocus speakers - Vânia Costa, from Oxford Nanopore Technologies.
She'll be comparing Maxwell® extraction kits for Nanopore sequencing, fragmentation effects and 12-month stability data.
A free event, on 9 June, London - https://ow.ly/eSYE50YW9Fe
#NanoporeSequencing
She'll be comparing Maxwell® extraction kits for Nanopore sequencing, fragmentation effects and 12-month stability data.
A free event, on 9 June, London - https://ow.ly/eSYE50YW9Fe
#NanoporeSequencing
May 13, 2026 at 8:05 AM
Meet one of our #MaxwellInFocus speakers - Vânia Costa, from Oxford Nanopore Technologies.
She'll be comparing Maxwell® extraction kits for Nanopore sequencing, fragmentation effects and 12-month stability data.
A free event, on 9 June, London - https://ow.ly/eSYE50YW9Fe
#NanoporeSequencing
She'll be comparing Maxwell® extraction kits for Nanopore sequencing, fragmentation effects and 12-month stability data.
A free event, on 9 June, London - https://ow.ly/eSYE50YW9Fe
#NanoporeSequencing
A Barcoded ITS Primer-Based Nanopore Sequencing Protocol for Detection of Alternaria Species and Other Fungal Pathogens in Diverse Plant Hosts
#Alternaria
#ITSprimers
#nanoporesequencing
#plantpathogen
#mycobiome
www.mdpi.com/2309-608X/11...
#Alternaria
#ITSprimers
#nanoporesequencing
#plantpathogen
#mycobiome
www.mdpi.com/2309-608X/11...
www.mdpi.com
March 28, 2025 at 8:56 PM
A Barcoded ITS Primer-Based Nanopore Sequencing Protocol for Detection of Alternaria Species and Other Fungal Pathogens in Diverse Plant Hosts
#Alternaria
#ITSprimers
#nanoporesequencing
#plantpathogen
#mycobiome
www.mdpi.com/2309-608X/11...
#Alternaria
#ITSprimers
#nanoporesequencing
#plantpathogen
#mycobiome
www.mdpi.com/2309-608X/11...
D2Sim: A Computational Simulator for NanoporeSequencing based DNA Data Storage https://www.biorxiv.org/content/10.1101/2024.03.17.585393v1
D2Sim: A Computational Simulator for NanoporeSequencing based DNA Data Storage https://www.biorxiv.org/content/10.1101/2024.03.17.585393v1
DNA data storage has gained significant attention due to its high storage density and durability. Ho
www.biorxiv.org
March 17, 2024 at 9:47 PM
D2Sim: A Computational Simulator for NanoporeSequencing based DNA Data Storage https://www.biorxiv.org/content/10.1101/2024.03.17.585393v1
D2Sim: A Computational Simulator for NanoporeSequencing based DNA Data Storage https://www.biorxiv.org/content/10.1101/2024.03.17.585393v1
D2Sim: A Computational Simulator for NanoporeSequencing based DNA Data Storage https://www.biorxiv.org/content/10.1101/2024.03.17.585393v1
DNA data storage has gained significant attention due to its high storage density and durability. Ho
www.biorxiv.org
March 17, 2024 at 9:47 PM
D2Sim: A Computational Simulator for NanoporeSequencing based DNA Data Storage https://www.biorxiv.org/content/10.1101/2024.03.17.585393v1
Nanopore sequencing enables highly accurate genotyping and identification of resistance determinants in key nosocomial pathogens
Blakeway, L. V., Cottingham, H. et al.
Paper
Details
#NanoporeSequencing #Genotyping #AntimicrobialResistance
Blakeway, L. V., Cottingham, H. et al.
Paper
Details
#NanoporeSequencing #Genotyping #AntimicrobialResistance
July 29, 2025 at 4:03 PM
Nanopore sequencing enables highly accurate genotyping and identification of resistance determinants in key nosocomial pathogens
Blakeway, L. V., Cottingham, H. et al.
Paper
Details
#NanoporeSequencing #Genotyping #AntimicrobialResistance
Blakeway, L. V., Cottingham, H. et al.
Paper
Details
#NanoporeSequencing #Genotyping #AntimicrobialResistance