Excited to share our largest spatial transcriptomics study to date! We profiled the dorsolateral prefrontal cortex in human 🧠 from 119 brain donors to investigate major depressive disorder (MDD) and bipolar disorder (BD) across biological sex.
www.biorxiv.org/content/10.6...
www.biorxiv.org/content/10.6...
November 2, 2026 at 12:08 PM
Excited to share our largest spatial transcriptomics study to date! We profiled the dorsolateral prefrontal cortex in human 🧠 from 119 brain donors to investigate major depressive disorder (MDD) and bipolar disorder (BD) across biological sex.
www.biorxiv.org/content/10.6...
www.biorxiv.org/content/10.6...
#LongTREC is at Long-Read Sequencing Uppsala (#LRUA26)! 🇸🇪🧬
We're very happy to be presenting our latest work on long-read transcriptomics:
Come and say hi! 👋
#LongTREC #LRUA26 #LongReadSequencing #Transcriptomics #MSCA #Bioinformatics
@anaconesa.bsky.social @tianyuanliu.bsky.social
We're very happy to be presenting our latest work on long-read transcriptomics:
Come and say hi! 👋
#LongTREC #LRUA26 #LongReadSequencing #Transcriptomics #MSCA #Bioinformatics
@anaconesa.bsky.social @tianyuanliu.bsky.social
November 2, 2026 at 6:50 PM
#LongTREC is at Long-Read Sequencing Uppsala (#LRUA26)! 🇸🇪🧬
We're very happy to be presenting our latest work on long-read transcriptomics:
Come and say hi! 👋
#LongTREC #LRUA26 #LongReadSequencing #Transcriptomics #MSCA #Bioinformatics
@anaconesa.bsky.social @tianyuanliu.bsky.social
We're very happy to be presenting our latest work on long-read transcriptomics:
Come and say hi! 👋
#LongTREC #LRUA26 #LongReadSequencing #Transcriptomics #MSCA #Bioinformatics
@anaconesa.bsky.social @tianyuanliu.bsky.social
10X Genomics @10xgenomics.bsky.social had a webinar about the use of Single Cell transcriptomics for blood biology and here are the highlights:
November 2, 2026 at 12:45 PM
10X Genomics @10xgenomics.bsky.social had a webinar about the use of Single Cell transcriptomics for blood biology and here are the highlights:
ARCADE disentangles cell abundance from continuous transcriptional state in spatial transcriptomics https://www.biorxiv.org/content/10.64898/2026.10.28.762703v1
November 3, 2026 at 6:48 PM
ARCADE disentangles cell abundance from continuous transcriptional state in spatial transcriptomics https://www.biorxiv.org/content/10.64898/2026.10.28.762703v1
Spatial transcriptomics of pediatric tuberculosis lymph nodes reveals a conserved hypoxia_SPP1 niche https://www.biorxiv.org/content/10.64898/2026.10.28.762471v1
November 3, 2026 at 12:17 PM
Spatial transcriptomics of pediatric tuberculosis lymph nodes reveals a conserved hypoxia_SPP1 niche https://www.biorxiv.org/content/10.64898/2026.10.28.762471v1
Unified cell segmentation for spatial transcriptomics via transcript reassignment https://www.biorxiv.org/content/10.64898/2026.11.03.764126v1
November 4, 2026 at 7:47 PM
Unified cell segmentation for spatial transcriptomics via transcript reassignment https://www.biorxiv.org/content/10.64898/2026.11.03.764126v1
🌍 Virtual spatial transcriptomics goes global!
An exciting new milestone! Researchers from every inhabited continent have now analyzed virtual spatial transcriptomics data generated using our DeepSpot-M model.
auroraomics.org/news/virtual...
An exciting new milestone! Researchers from every inhabited continent have now analyzed virtual spatial transcriptomics data generated using our DeepSpot-M model.
auroraomics.org/news/virtual...
November 2, 2026 at 8:10 PM
🌍 Virtual spatial transcriptomics goes global!
An exciting new milestone! Researchers from every inhabited continent have now analyzed virtual spatial transcriptomics data generated using our DeepSpot-M model.
auroraomics.org/news/virtual...
An exciting new milestone! Researchers from every inhabited continent have now analyzed virtual spatial transcriptomics data generated using our DeepSpot-M model.
auroraomics.org/news/virtual...
An Analysis benchmarks segmentation methods across different datasets and presents Nextflow, a pipeline for method selection for spatial transcriptomics.
www.nature.com/articles/s41...
www.nature.com/articles/s41...
Benchmarking segmentation methods for spatial transcriptomics - Nature Methods
This Analysis benchmarks segmentation methods across different datasets and presents Nextflow, a pipeline for standardized method selection for spatial transcriptomics.
www.nature.com
October 30, 2026 at 3:02 PM
An Analysis benchmarks segmentation methods across different datasets and presents Nextflow, a pipeline for method selection for spatial transcriptomics.
www.nature.com/articles/s41...
www.nature.com/articles/s41...
Quantitative Donor Histology and Transcriptomics Link Pancreatic Composition and Precancers Across the Adult Lifespan https://www.biorxiv.org/content/10.64898/2026.10.30.763196v1
November 4, 2026 at 2:45 AM
Quantitative Donor Histology and Transcriptomics Link Pancreatic Composition and Precancers Across the Adult Lifespan https://www.biorxiv.org/content/10.64898/2026.10.30.763196v1
ARCADE disentangles cell abundance from continuous transcriptional state in spatial transcriptomics #SingleCell 🧪🧬🖥️
https://www.biorxiv.org/content/10.64898/2026.10.28.762703v1
https://www.biorxiv.org/content/10.64898/2026.10.28.762703v1
November 3, 2026 at 8:01 PM
ARCADE disentangles cell abundance from continuous transcriptional state in spatial transcriptomics #SingleCell 🧪🧬🖥️
https://www.biorxiv.org/content/10.64898/2026.10.28.762703v1
https://www.biorxiv.org/content/10.64898/2026.10.28.762703v1
5/7 Our collaborators @wabniklab.bsky.social and @nowako76.bsky.social made it possible to pair time-resolved transcriptomics with quantitative hormone profiling. We could track changes in gene expression alongside changes in auxin and its oxidation products during the decline and recovery phases.
November 5, 2026 at 1:07 PM
5/7 Our collaborators @wabniklab.bsky.social and @nowako76.bsky.social made it possible to pair time-resolved transcriptomics with quantitative hormone profiling. We could track changes in gene expression alongside changes in auxin and its oxidation products during the decline and recovery phases.
#SenCat
Universal & Cell type-specific #Senescence transcriptomics + proteomics signature
14 primary human cell types incld HUVEC, human coronary endothelial cells & smooth muscle cells😆
#MolecularCell 2026
www.sciencedirect.com/science/arti...
Universal & Cell type-specific #Senescence transcriptomics + proteomics signature
14 primary human cell types incld HUVEC, human coronary endothelial cells & smooth muscle cells😆
#MolecularCell 2026
www.sciencedirect.com/science/arti...
November 3, 2026 at 1:04 PM
#SenCat
Universal & Cell type-specific #Senescence transcriptomics + proteomics signature
14 primary human cell types incld HUVEC, human coronary endothelial cells & smooth muscle cells😆
#MolecularCell 2026
www.sciencedirect.com/science/arti...
Universal & Cell type-specific #Senescence transcriptomics + proteomics signature
14 primary human cell types incld HUVEC, human coronary endothelial cells & smooth muscle cells😆
#MolecularCell 2026
www.sciencedirect.com/science/arti...
We had a great start to the second day of the HCA 2026 Asia Meeting including hearing Peter Kharchenko give the first Keynote address, 'Correcting for cell segmentation errors in analysis of spatial transcriptomics'. #HCA2026Asia #Genomics
November 3, 2026 at 5:22 PM
We had a great start to the second day of the HCA 2026 Asia Meeting including hearing Peter Kharchenko give the first Keynote address, 'Correcting for cell segmentation errors in analysis of spatial transcriptomics'. #HCA2026Asia #Genomics
RNA Analysis and Transcriptomics Market Growth Insights 2035 | WiseGuyReports www.wiseguyreports.com/reports/rna-...
www.wiseguyreports.com
November 4, 2026 at 11:23 AM
RNA Analysis and Transcriptomics Market Growth Insights 2035 | WiseGuyReports www.wiseguyreports.com/reports/rna-...
We’re hiring a postdoc/scientist at Biohub!
How do T cells and neighboring cells form immunological engrams? Explore this with engineered mouse models, spatial transcriptomics & in vivo perturbations!
Apply: job-boards.greenhouse.io/biohub/jobs/...
#Immunology #STEMJobs #Tcells
How do T cells and neighboring cells form immunological engrams? Explore this with engineered mouse models, spatial transcriptomics & in vivo perturbations!
Apply: job-boards.greenhouse.io/biohub/jobs/...
#Immunology #STEMJobs #Tcells
Postdoctoral Fellow/ Scientist I, T Cell Biology and Tissue Immunology
New York, NY (Onsite)
job-boards.greenhouse.io
November 4, 2026 at 3:16 PM
We’re hiring a postdoc/scientist at Biohub!
How do T cells and neighboring cells form immunological engrams? Explore this with engineered mouse models, spatial transcriptomics & in vivo perturbations!
Apply: job-boards.greenhouse.io/biohub/jobs/...
#Immunology #STEMJobs #Tcells
How do T cells and neighboring cells form immunological engrams? Explore this with engineered mouse models, spatial transcriptomics & in vivo perturbations!
Apply: job-boards.greenhouse.io/biohub/jobs/...
#Immunology #STEMJobs #Tcells
RNA Analysis and Transcriptomics Market Growth Insights 2035 | WiseGuyReports www.wiseguyreports.com/reports/rna-...
RNA Analysis and Transcriptomics Market Growth Insights 2035
RNA Analysis and Transcriptomics Market is Expected to Grow From USD 4400 Billion To USD 8.5 Billion by 2035, Reaching at a CAGR of 6.7% During 2026 - 2035
www.wiseguyreports.com
November 3, 2026 at 11:37 AM
RNA Analysis and Transcriptomics Market Growth Insights 2035 | WiseGuyReports www.wiseguyreports.com/reports/rna-...
#Neurodegenerative Theme Review
Genetically Engineered Mouse Models for Alzheimer Disease and Frontotemporal Dementia: New Insights from Single-Cell and Spatial Transcriptomics. Authors from @keck.usc.edu
Full text: https://loom.ly/pWmHil0
#LegacyContent
Genetically Engineered Mouse Models for Alzheimer Disease and Frontotemporal Dementia: New Insights from Single-Cell and Spatial Transcriptomics. Authors from @keck.usc.edu
Full text: https://loom.ly/pWmHil0
#LegacyContent
November 3, 2026 at 5:04 PM
#Neurodegenerative Theme Review
Genetically Engineered Mouse Models for Alzheimer Disease and Frontotemporal Dementia: New Insights from Single-Cell and Spatial Transcriptomics. Authors from @keck.usc.edu
Full text: https://loom.ly/pWmHil0
#LegacyContent
Genetically Engineered Mouse Models for Alzheimer Disease and Frontotemporal Dementia: New Insights from Single-Cell and Spatial Transcriptomics. Authors from @keck.usc.edu
Full text: https://loom.ly/pWmHil0
#LegacyContent
Unified cell segmentation for spatial transcriptomics via transcript reassignment https://www.biorxiv.org/content/10.64898/2026.11.03.764126v1
November 4, 2026 at 7:47 PM
Unified cell segmentation for spatial transcriptomics via transcript reassignment https://www.biorxiv.org/content/10.64898/2026.11.03.764126v1
Stay afterwards for the open discussion on challenges in transcriptomics that lrRNA-seq can address, co-moderated by Wilfried and Ana Conesa (14:30). 💬
#LongTREC #LRUA26 #LongReadSequencing #Transcriptomics #lrRNAseq #MSCA
#LongTREC #LRUA26 #LongReadSequencing #Transcriptomics #lrRNAseq #MSCA
November 3, 2026 at 9:35 AM
Stay afterwards for the open discussion on challenges in transcriptomics that lrRNA-seq can address, co-moderated by Wilfried and Ana Conesa (14:30). 💬
#LongTREC #LRUA26 #LongReadSequencing #Transcriptomics #lrRNAseq #MSCA
#LongTREC #LRUA26 #LongReadSequencing #Transcriptomics #lrRNAseq #MSCA
How has transcriptomics shaped our understanding of thyroid cancer?
A new review by Barbara Jarząb explores the achievements of thyroid cancer transcriptomics over the years, demonstrating how it has deepened our understanding of thyroid cancer.
🔗 doi.org/10.1530/ETJ-...
A new review by Barbara Jarząb explores the achievements of thyroid cancer transcriptomics over the years, demonstrating how it has deepened our understanding of thyroid cancer.
🔗 doi.org/10.1530/ETJ-...
November 5, 2026 at 12:21 PM
How has transcriptomics shaped our understanding of thyroid cancer?
A new review by Barbara Jarząb explores the achievements of thyroid cancer transcriptomics over the years, demonstrating how it has deepened our understanding of thyroid cancer.
🔗 doi.org/10.1530/ETJ-...
A new review by Barbara Jarząb explores the achievements of thyroid cancer transcriptomics over the years, demonstrating how it has deepened our understanding of thyroid cancer.
🔗 doi.org/10.1530/ETJ-...
🌱 RESEARCH 🌱
Spatiotemporal Transcriptomics Reveals That a ZF-HD–GmCWINV4 Module Controls Carbon Partitioning and Seed Size in Soybean - Wu, Ding et al.
🔗 doi.org/10.1111/pbi....
#plantscience
Spatiotemporal Transcriptomics Reveals That a ZF-HD–GmCWINV4 Module Controls Carbon Partitioning and Seed Size in Soybean - Wu, Ding et al.
🔗 doi.org/10.1111/pbi....
#plantscience
October 30, 2026 at 11:01 AM
🌱 RESEARCH 🌱
Spatiotemporal Transcriptomics Reveals That a ZF-HD–GmCWINV4 Module Controls Carbon Partitioning and Seed Size in Soybean - Wu, Ding et al.
🔗 doi.org/10.1111/pbi....
#plantscience
Spatiotemporal Transcriptomics Reveals That a ZF-HD–GmCWINV4 Module Controls Carbon Partitioning and Seed Size in Soybean - Wu, Ding et al.
🔗 doi.org/10.1111/pbi....
#plantscience
We profiled MRTs from 17 patients at @sjdhospitalbarcelona.org with single-nucleus multiome (RNA + ATAC) and Visium spatial transcriptomics on matched sections, spanning brain, kidney and soft tissues.
We also established 7 patient-derived models to test our findings.
We also established 7 patient-derived models to test our findings.
November 4, 2026 at 6:25 PM
We profiled MRTs from 17 patients at @sjdhospitalbarcelona.org with single-nucleus multiome (RNA + ATAC) and Visium spatial transcriptomics on matched sections, spanning brain, kidney and soft tissues.
We also established 7 patient-derived models to test our findings.
We also established 7 patient-derived models to test our findings.
OncoSpot enables benchmarking of cancer spatial transcriptomics methods across tumor evolutionary modes https://www.biorxiv.org/content/10.64898/2026.11.01.763496v1
November 5, 2026 at 10:47 AM
OncoSpot enables benchmarking of cancer spatial transcriptomics methods across tumor evolutionary modes https://www.biorxiv.org/content/10.64898/2026.11.01.763496v1
7) Spatial transcriptomics and imaging of imgTLSs revealed that DCs acquire conserved spatially restricted resident and migratory signaling programs in TLS-containing tumors. Both proximal and distal DC subsets promote rapid induction of lymphotoxin, TNFα, and CD40.
November 4, 2026 at 4:46 PM
7) Spatial transcriptomics and imaging of imgTLSs revealed that DCs acquire conserved spatially restricted resident and migratory signaling programs in TLS-containing tumors. Both proximal and distal DC subsets promote rapid induction of lymphotoxin, TNFα, and CD40.