Happy to announce that our „newest old tool“ autoMLST2.0 is out and published. You need an accurate and easy to use tool to build #phylogenetictrees from #bacterialgenomes: academic.oup.com/nar/advance-...

Autocycler: long-read consensus assembly for bacterial genomes. #LongRead #SequneceData #GenomeAssembly #ConsensusAssembly #BacterialGenomes #Bioinformatics 🧬 🖥️
academic.oup.com/bioinformati...

PanSpace: Fast and Scalable Indexing for Massive Bacterial Databases. #BacterialDatabase #BacterialGenomes #SequeceIndexing #Kmers #Genomics #Bioinformatics @biorxivpreprint.bsky.social 🧪🧬 🖥️
www.biorxiv.org/content/10.1...

Curating 16S rRNA databases enhances taxonomic accuracy and computational efficiency in microbial profiling. #Metabarcoding #16S #rRNA #BacterialGenomes #SequenceDatabases #DatabaseCuration #Genomics #Bioinformatics @biorxivpreprint.bsky.social 🧪🧬 🖥️
www.biorxiv.org/content/10.1...

Homologous recombination shapes the architecture and evolution of bacterial genomes. #HomologousRecombination #BacterialGenomes @narjournal.bsky.social 🧬
academic.oup.com/nar/advance-...

Autocycler: long-read consensus assembly for bacterial genomes. #BacterialGenomes #LongReads #Sequencing #Genomics #Bioinformatics #Rust
academic.oup.com/bioinformati...

github.com/rrwick/Autocycler

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IMPORTANT DAY for scientists interested in bacterial genomics #bacterialgenomes

Now 400,000 Salmonella genomes available for analysis on Enterobase‼️ https://enterobase.warwick.ac.uk

More genomes are available for Salmonella than any other bacterial genus:...