#C1-meta­bol­ism
RRIDs were included in this in Microbial Biotechnology paper. Thanks for making your methods matter! #STMpublishing #ReproducibleResearch #reproducibility
Formate from THF‐C1 metabolism induces the AOX1 promoter in formate dehydrogenase‐deficient Komagataella phaffii
Read the full paper: Formate from THF‐C1 metabolism induces the AOX1 promoter in formate dehydrogenase‐deficient Komagataella phaffii
doi.org
September 18, 2026 at 7:02 AM
#MicroSky: METABOLISM. In vivo catalytic rates of 99 enzymes in formate-grown Methanococcus maripaludis reveal weak agreement with sequence-predicted turnover numbers, highlighting low enzyme saturation as a key constraint in C1 metabolism and bioengineering. doi.org/10.1111/1751...
September 11, 2026 at 2:14 PM
These bacteria were *eating* that stuff - and therefore scrubbing the fog's water vapour clean of toxins linked to smog and human respiratory problems.

A tiny, temporary anti-pollution factory, working to keep our air breathable.

Amazing!

journals.asm.org/doi/10.1128/...

6/
Growth and formaldehyde degradation of photoheterotrophic Methylobacterium within radiation fogs | mBio
While bacteria are common in the atmosphere, their activity in situ has remained unclear. Using stagnant radiation fogs as new study systems where sampling is optimal, the dynamics, composition, cellular characteristics, and metabolic rates of fog water microbiomes, dominated by Methylobacterium sp., show that they are a hub of active detoxification of atmospheric formaldehyde and likely growing in situ on the basis of heterotrophic or photoheterotrophic metabolism of volatile C1 compounds, with implications for atmospheric chemistry and fog harvesting as sources of freshwater.
journals.asm.org
August 12, 2026 at 4:18 PM
Using high-throughput 13CO2 labeling to determine if photorespiration can be engineered to increase flux to one-carbon metabolism academic.oup.com/jxb/article/... @jxbotany.bsky.social
Using high-throughput 13CO2 labeling to determine if photorespiration can be engineered to increase flux to one-carbon metabolism
Abstract. Photorespiration is connected to other aspects of plant metabolism, including one-carbon (C1) metabolism. While a major contributor of C1 units i
academic.oup.com
July 22, 2026 at 1:29 PM
Before giving a lecture on C1 metabolism at Microbial Diversity, Leslie Day (a postdoc in my lab and a member of the course faculty, shared her road in science. @mblscience.bsky.social
July 15, 2026 at 1:13 PM
Microbial C1 assimilation pathways for chemical synthesis: from native metabolism to synthetic design www.sciencedirect.com/science/arti... #jcampubs
June 30, 2026 at 1:12 PM
`This proposed cycle coordinates photorespiration with the metabolism of nitrogen and sulfur, the malate valve, the pentose phosphate shunt, the C1 pathway, the C2 glycolate pathway, and the C3 carbon fixation pathway. The three mechanisms tend to improve the energy efficiency of most vascular […]
Original post on mastodon.social
mastodon.social
June 13, 2026 at 1:12 AM
New in JB: Bauer, Rudel & Beier explore the mechanisms of riboregulation via 4 sRNAs in Neisseria gonorrhoeae C1 metabolism.
journals.asm.org/doi/10.1128/...
@asm.org #JBacteriol
May 4, 2026 at 12:01 PM
Check-out the latest advances in Microbial C1 Metabolism: L Larke-Mejía et al. studied the structural and evolutionary insights into the isoprene monooxygenases.

buff.ly/bTdHlvO

#FEMSMicrobiolEcol #ecology
March 20, 2026 at 9:02 AM
2021年に発表されたブドウ種子エキスのプロシアニジンC1にセノリシス効果があるという論文に注意喚起が出ています。共同研究者にJudith Campisi, James Kirklandもいて、自分の周りでも結構話題だった気がします。自分のグループでも雑誌会で紹介してた
www.nature.com/articles/s42...
Editorial Expression of Concern: The flavonoid procyanidin C1 has senotherapeutic activity and increases lifespan in mice - Nature Metabolism
Nature Metabolism - Editorial Expression of Concern: The flavonoid procyanidin C1 has senotherapeutic activity and increases lifespan in mice
www.nature.com
March 9, 2026 at 12:50 PM
Members of the genus Methylobacterium have recently been shown to consume methoxylated aromatics produced from lignin. With Methylobacterium's natural C1 metabolism, the toxic formaldhyde produced is not a limiting factor as seen in other species. See Koko's paper journals.asm.org/doi/full/10....
Engineered Methylobacterium extorquens grows well on methoxylated aromatics due to its formaldehyde metabolism and stress response | mSphere
In developing biotechnological solutions for a circular economy, it is critical to valorize all parts of renewable resources, such as lignocellulose from vegetative components of agricultural crops an...
journals.asm.org
March 6, 2026 at 3:41 PM
Dear Martin & @valentin-ha.bsky.social
It was a great pleasure to contribute to this great story on C1 metabolism, photorespiration and DNA methylation….

#PlantScience #Epigenetics #metabolomics
February 25, 2026 at 8:26 PM
#Photorespiration fuels C1 metabolism to support DNA methylation in Arabidopsis, linking photosynthetic C flux to #epigenome stability & showing how rising CO₂ can reshape the plant #methylome.

by #ValentinHankofer &
@martingroth.bsky.social

With contributions by
@andreaghirardo.bsky.social
Photorespiration is linked to DNA methylation by formate as a one-carbon source - Nature Plants
This study reveals that Arabidopsis reassimilates formate produced during photorespiration via the cytosolic folate cycle to fuel DNA methylation, forming a metabolic–epigenetic bridge that links elev...
www.nature.com
February 25, 2026 at 7:37 PM
The authors included RRIDs in their paper! RRIDs improve reproducibility in scientific research. #RRID #accelerateopenscience #methodsmatter
Combining evolution and machine learning-guided pathway optimization to engineer a novel methylsuccinate module for synthetic C1 metabolism in vivo
doi.org
February 1, 2026 at 8:02 AM
Bold claims coming out of China (still good news because no-matter-what it means people are working on it seriously) www.nature.com/articles/s42... new age extending compound found in grape seeds Procyanidin C1 found to work on mice & to be tested in humans
The flavonoid procyanidin C1 has senotherapeutic activity and increases lifespan in mice - Nature Metabolism
The polyphenol procyanidin C1, a compound found in grape seeds, possesses senomorphic or senolytic activity and is shown to extend the healthspan and survival of old mice and in various models of sene...
www.nature.com
January 26, 2026 at 8:13 AM
📝Primary @natplants.nature.com article: "Metabolic flux analysis in leaf metabolism quantifies the link between photorespiration and one carbon metabolism" by Berkley Walker et al.

Read it here 👉 www.nature.com/articles/s41...
Metabolic flux analysis in leaf metabolism quantifies the link between photorespiration and one carbon metabolism - Nature Plants
This paper quantified carbon flux between two major plant metabolisms—photorespiration and C1 metabolism—using 13CO2 labelling and isotopically non-stationary metabolic flux analysis.
www.nature.com
January 23, 2026 at 11:54 AM
❌ The problem: Metabolic engineering heavily relies on adaptive laboratory evolution to functionalize synthetic metabolism, for example for more efficient C1 assimilation, in vivo. However, desired phenotypes often emerge only after years - thus, metabolic engineering turnover times aren’t great.
January 21, 2026 at 7:52 PM
How do we engineer metabolism more efficiently ❓
The core work of my PhD focussed on this question, and I am thrilled to now share the respective Preprint:
www.biorxiv.org/content/10.6...
Combining evolution and machine learning-guided pathway optimization to engineer a novel methylsuccinate module for synthetic C1 metabolism in vivo
De novo metabolic pathways open possibilities for sustainable biotransformations in microbes. However, the in vivo-implementation of such new-to-nature pathways is highly challenging and heavily relies on adaptive laboratory evolution (ALE) of the host's native metabolic network. Here, we assess how much this need for host-centric ALE can be overcome and/or complemented through the informed design of the newly introduced pathway. Exemplifying for a synthetic CO2-fixation module via methylsuccinate, we established methylsuccinate-dependent growth of Escherichia coli over six months by ALE of E. coli's native metabolism. In parallel, we developed a machine-learning guided workflow (MEVIS) for the automated engineering of the synthetic pathway, resulting in methylsuccinate-dependent growth within three weeks. Critically, performing MEVIS in the background of the ALE-evolved strain is necessary to further approach wild-type like growth, demonstrating how ALE in combination with machine-learning-guided lab automation holds great potential to accelerate and improve design-build-test-learn cycles in contemporary metabolic engineering. ### Competing Interest Statement The authors have declared no competing interest. Max Planck Society, https://ror.org/01hhn8329 Bosch Research Foundation
www.biorxiv.org
January 21, 2026 at 7:52 PM
Combining evolution and machine learning-guided pathway optimization to engineer a novel methylsuccinate module for synthetic C1 metabolism in vivo https://www.biorxiv.org/content/10.64898/2026.01.16.699985v1
January 21, 2026 at 2:46 AM
Combining evolution and machine learning-guided pathway optimization to engineer a novel methylsuccinate module for synthetic C1 metabolism in vivo https://www.biorxiv.org/content/10.64898/2026.01.16.699985v1
January 21, 2026 at 2:46 AM
Formate dehydrogenase is targeted to mitochondria (not chloroplasts) and constitutes a C1 shunt between mitochondria and cytoplasm

Mitochondrial formate dehydrogenase links mitochondrial and cytosolic one carbon metabolism via a one-carbon shunt url: academic.oup.com/plphys/artic...
December 6, 2025 at 2:19 PM
Ist jetzt nicht ganz so neu. Und mit Editorial Note.
Davon abgesehen, würden Kassen ein Medikament, das einfach alle nehmen, um länger zu leben, eher nicht zahlen.

www.nature.com/articles/s42...
The flavonoid procyanidin C1 has senotherapeutic activity and increases lifespan in mice - Nature Metabolism
The polyphenol procyanidin C1, a compound found in grape seeds, possesses senomorphic or senolytic activity and is shown to extend the healthspan and survival of old mice and in various models of sene...
www.nature.com
November 15, 2025 at 10:29 AM