We are very happy to provide a consolidated update on the #NeuroML ecosystem in our eLife paper, “The NeuroML ecosystem for standardized multi-scale modeling in neuroscience” : doi.org/10.7554/eLif... . 1/x
January 28, 2025 at 2:39 PM
We are very happy to provide a consolidated update on the #NeuroML ecosystem in our eLife paper, “The NeuroML ecosystem for standardized multi-scale modeling in neuroscience” : doi.org/10.7554/eLif... . 1/x
#NeuroML is participating in #GSoC2025 again this year under @incforg.bsky.social . We're looking for people with some experience of #ComputationalNeuroscience to work on developing #standardised biophysically detailed computational models using #NeuroML #PyNN and #OpenSourceBrain. 1/2
Outreach and training — NeuroML Documentation
docs.neuroml.org
March 5, 2025 at 10:58 AM
#NeuroML is participating in #GSoC2025 again this year under @incforg.bsky.social . We're looking for people with some experience of #ComputationalNeuroscience to work on developing #standardised biophysically detailed computational models using #NeuroML #PyNN and #OpenSourceBrain. 1/2
- #RAG for NeuroML: learn from and query curated information sources
- iterative LLM assisted code/model generation: modelling, validation, and simulation
#Neuroscience #ComputationalNeuroscience #AcademicChatter #LangChain
- iterative LLM assisted code/model generation: modelling, validation, and simulation
#Neuroscience #ComputationalNeuroscience #AcademicChatter #LangChain
February 2, 2026 at 12:14 PM
- #RAG for NeuroML: learn from and query curated information sources
- iterative LLM assisted code/model generation: modelling, validation, and simulation
#Neuroscience #ComputationalNeuroscience #AcademicChatter #LangChain
- iterative LLM assisted code/model generation: modelling, validation, and simulation
#Neuroscience #ComputationalNeuroscience #AcademicChatter #LangChain
💡NeuroML is an international, collaborative initiative to develop a language and associated software ecosystem for working with data-driven biophysically detailed models of neural systems.
👨🔬Padraig Gleeson; Ankur Sinha; Boris Marin; Robert Cannon
🔗Link and more in the comments 👇
👨🔬Padraig Gleeson; Ankur Sinha; Boris Marin; Robert Cannon
🔗Link and more in the comments 👇
March 4, 2025 at 6:57 PM
💡NeuroML is an international, collaborative initiative to develop a language and associated software ecosystem for working with data-driven biophysically detailed models of neural systems.
👨🔬Padraig Gleeson; Ankur Sinha; Boris Marin; Robert Cannon
🔗Link and more in the comments 👇
👨🔬Padraig Gleeson; Ankur Sinha; Boris Marin; Robert Cannon
🔗Link and more in the comments 👇
The NeuroML ecosystem for standardized multi-scale modeling in neuroscience https://www.biorxiv.org/content/10.1101/2023.12.07.570537v1
The NeuroML ecosystem for standardized multi-scale modeling in neuroscience https://www.biorxiv.org/content/10.1101/2023.12.07.570537v1
Data-driven models of neurons and circuits are important for understanding how the properties of mem
www.biorxiv.org
December 12, 2023 at 8:16 AM
The NeuroML ecosystem for standardized multi-scale modeling in neuroscience https://www.biorxiv.org/content/10.1101/2023.12.07.570537v1
🚀 Congratulations Dr. Subhasis Ray (@subharay.bsky.social) on being elected as a member of the NeuroML editorial board for 2025-2027! 🎉
On behalf of the MOOSE team, we wish him great success in advancing NeuroML and continuing his trailblazing work. 👏 #ComputationalNeuroscience #NeuroML
On behalf of the MOOSE team, we wish him great success in advancing NeuroML and continuing his trailblazing work. 👏 #ComputationalNeuroscience #NeuroML
January 15, 2025 at 1:42 PM
🚀 Congratulations Dr. Subhasis Ray (@subharay.bsky.social) on being elected as a member of the NeuroML editorial board for 2025-2027! 🎉
On behalf of the MOOSE team, we wish him great success in advancing NeuroML and continuing his trailblazing work. 👏 #ComputationalNeuroscience #NeuroML
On behalf of the MOOSE team, we wish him great success in advancing NeuroML and continuing his trailblazing work. 👏 #ComputationalNeuroscience #NeuroML
Building detailed neuronal models is hard---#NeuroML helps, but there’s still a steep learning curve. We're investigating how #LLMs can be used to create natural language interfaces to improve accessibility:
More details in the post:
ankursinha.in/2026/01/30/b...
More details in the post:
ankursinha.in/2026/01/30/b...
ankursinha.in
February 2, 2026 at 12:14 PM
Building detailed neuronal models is hard---#NeuroML helps, but there’s still a steep learning curve. We're investigating how #LLMs can be used to create natural language interfaces to improve accessibility:
More details in the post:
ankursinha.in/2026/01/30/b...
More details in the post:
ankursinha.in/2026/01/30/b...
Please spread the word, especially to students interested in modelling. We will help them learn the NeuroML ecosystem so they can use its standardised pipeline in their work.
docs.neuroml.org/NeuroMLOrg/O...
CC #AcademicChatter 2/2
docs.neuroml.org/NeuroMLOrg/O...
CC #AcademicChatter 2/2
Outreach and training — NeuroML Documentation
docs.neuroml.org
March 5, 2025 at 10:58 AM
Please spread the word, especially to students interested in modelling. We will help them learn the NeuroML ecosystem so they can use its standardised pipeline in their work.
docs.neuroml.org/NeuroMLOrg/O...
CC #AcademicChatter 2/2
docs.neuroml.org/NeuroMLOrg/O...
CC #AcademicChatter 2/2
#NeuroML is a standard and software ecosystem for data-driven biophysically detailed #ComputationalModelling endorsed by the @incforg.bsky.social and #CoMBINE, and includes a large community of users and software developers. 2/x
January 28, 2025 at 2:39 PM
#NeuroML is a standard and software ecosystem for data-driven biophysically detailed #ComputationalModelling endorsed by the @incforg.bsky.social and #CoMBINE, and includes a large community of users and software developers. 2/x
Open Access UCL Research: The NeuroML ecosystem for standardized multi-scale modeling in neuroscience discovery.ucl.ac.uk/id/eprint/10...
The NeuroML ecosystem for standardized multi-scale modeling in neuroscience
-
UCL Discovery
UCL Discovery is UCL's open access repository, showcasing and providing access to UCL research outputs from all UCL disciplines.
discovery.ucl.ac.uk
January 20, 2025 at 10:01 AM
Open Access UCL Research: The NeuroML ecosystem for standardized multi-scale modeling in neuroscience discovery.ucl.ac.uk/id/eprint/10...
INCF has endorsed NeuroML, a model description language for computational neuroscience as a standard for computational neuroscience. ...and there was much rejoicing!
bit.ly/2MByhUp
bit.ly/2MByhUp
December 5, 2024 at 6:57 AM
INCF has endorsed NeuroML, a model description language for computational neuroscience as a standard for computational neuroscience. ...and there was much rejoicing!
bit.ly/2MByhUp
bit.ly/2MByhUp
MetaCell, leaders in software for neuroscience, is hosting a free webinar on 4/20 to demonstrate Open Source Brain: a resource for sharing and developing, visualizing and simulating computational models of neural systems. @MetaCell Register now!
ow.ly/fJ9S30jsWYS
ow.ly/fJ9S30jsWYS
WEBINAR: Modelling the brain, together
MetaCell, world leaders in software for neuroscience, is hosting a free webinar to demonstrate Open Source Brain (OSB), a resource for sharing and collaboratively developing, visualizing and simulating computational models of neural systems. Developed by the Silver Lab at University College London (UCL) and supported by the Wellcome Trust, OSB promotes development of models in standard formats such as NeuroML and PyNN, ensuring transparency, modularity, accessibility and cross-simulator portability. At present, it counts 700+ members, 50+ research groups and 150+ projects. With a fantastic guest speaker from Open Source Brain, you’ll learn how you can make the most out of your neuroscience models, creating computational experiments, visualising and simulating them without ever leaving your web browser. The session (45 mins + Q&A) will take place on Friday 20th April at 3pm BST // 10am EDT // 7am PDT and will be presented by Matteo Cantarelli, CTO of MetaCell, and Dr. Padraig Gleeson, Senior Researcher at UCL. Upon registration you'll receive an email from gotowebinar. Please follow the link in that email to join the webinar on Friday 20th April.
ow.ly
December 5, 2024 at 6:50 AM
MetaCell, leaders in software for neuroscience, is hosting a free webinar on 4/20 to demonstrate Open Source Brain: a resource for sharing and developing, visualizing and simulating computational models of neural systems. @MetaCell Register now!
ow.ly/fJ9S30jsWYS
ow.ly/fJ9S30jsWYS
Miss this weeks delightful webinar?! So it goes, the world turns, we record. Watch Dr. Crook discuss NeuroML!
youtu.be/bGeilKVTajk
youtu.be/bGeilKVTajk
December 5, 2024 at 6:42 AM
Miss this weeks delightful webinar?! So it goes, the world turns, we record. Watch Dr. Crook discuss NeuroML!
youtu.be/bGeilKVTajk
youtu.be/bGeilKVTajk
Join us today at 11 AM PST for Dr. Sharon Crook's webinar on NeuroML! Click here to join!
ow.ly/HiMp30gb7C9
ow.ly/HiMp30gb7C9
December 5, 2024 at 6:42 AM
Join us today at 11 AM PST for Dr. Sharon Crook's webinar on NeuroML! Click here to join!
ow.ly/HiMp30gb7C9
ow.ly/HiMp30gb7C9
Join us tomorrow at 11 AM PST as Dr. Sharon Crook discusses NeuroML. Join here!
neuinfo.org/about/Upcoming…
neuinfo.org/about/Upcoming…
December 5, 2024 at 6:42 AM
Join us tomorrow at 11 AM PST as Dr. Sharon Crook discusses NeuroML. Join here!
neuinfo.org/about/Upcoming…
neuinfo.org/about/Upcoming…
👀 With NeuroML, you can easily create, visualise, analyse, inspect, simulate, share, and re-use models and model components.
🔗https://open-neuroscience.com/en/post/neuroml/
🔗https://open-neuroscience.com/en/post/neuroml/
March 4, 2025 at 6:58 PM
👀 With NeuroML, you can easily create, visualise, analyse, inspect, simulate, share, and re-use models and model components.
🔗https://open-neuroscience.com/en/post/neuroml/
🔗https://open-neuroscience.com/en/post/neuroml/
cells with calcium dynamics, all accelerated via JAX on GPU. Key features include a NeuroML‑to‑SWC converter for multicompartmental morphologies, real‑time parameter tuning through WebSocket streaming, and an interactive React frontend with Three.js for 3D morphology ...
June 13, 2026 at 12:56 PM
cells with calcium dynamics, all accelerated via JAX on GPU. Key features include a NeuroML‑to‑SWC converter for multicompartmental morphologies, real‑time parameter tuning through WebSocket streaming, and an interactive React frontend with Three.js for 3D morphology ...
Ankur Sinha: NeuroML at Google Summer of Code 2025: looking for candidates for standardised biophysically detailed modelling project
NeuroML at Google Summer of Code 2025: looking for candidates for standardised biophysically detailed modelling project
Ankur Sinha
groups.google.com
March 31, 2025 at 10:14 PM
Ankur Sinha: NeuroML at Google Summer of Code 2025: looking for candidates for standardised biophysically detailed modelling project
Ankur Sinha: NeuroML at Google Summer of Code 2025: looking for candidates for standardised biophysically detailed modelling project
NeuroML at Google Summer of Code 2025: looking for candidates for standardised biophysically detailed modelling project
Ankur Sinha
groups.google.com
March 6, 2025 at 11:14 PM
Ankur Sinha: NeuroML at Google Summer of Code 2025: looking for candidates for standardised biophysically detailed modelling project
The NeuroML ecosystem for standardized multi-scale modeling in neuroscience https://www.biorxiv.org/content/10.1101/2023.12.07.570537v1
The NeuroML ecosystem for standardized multi-scale modeling in neuroscience https://www.biorxiv.org/content/10.1101/2023.12.07.570537v1
Data-driven models of neurons and circuits are important for understanding how the properties of mem
www.biorxiv.org
December 12, 2023 at 8:16 AM
The NeuroML ecosystem for standardized multi-scale modeling in neuroscience https://www.biorxiv.org/content/10.1101/2023.12.07.570537v1
In this way, NeuroML supports #FAIR principles, thus promoting open, transparent and reproducible science. Whether you’d like to use NeuroML in your work, or support NeuroML in your tools/modelling pipelines, please come speak to us. Full documentation on NeuroML is here at docs.neuroml.org 13/13
docs.neuroml.org
January 28, 2025 at 2:39 PM
In this way, NeuroML supports #FAIR principles, thus promoting open, transparent and reproducible science. Whether you’d like to use NeuroML in your work, or support NeuroML in your tools/modelling pipelines, please come speak to us. Full documentation on NeuroML is here at docs.neuroml.org 13/13
NeuroML is a global community initiative. It is developed by an elected Editorial Board and overseen by a Scientific Committee. All the software/documentation/models produced in NeuroML are completely Free/Open #FOSS. 12/x
January 28, 2025 at 2:39 PM
NeuroML is a global community initiative. It is developed by an elected Editorial Board and overseen by a Scientific Committee. All the software/documentation/models produced in NeuroML are completely Free/Open #FOSS. 12/x
... visualising (#pyNeuroML, #OSB, #NeuroML-DB), simulating (#NEURON, #NetPyNE, #Brian, #PyNN, #NEST, #MOOSE, #EDEN), model fitting/optimisation (#NeuroTune, #BluePyOpt, #NetPyNE), sharing and reusing of models (#OSB, NeuroML-DB, #NeuroMorpho.org). 11/x
NeuroMorpho.Org - a centrally curated inventory of digitally reconstructed neurons and glia
New dissertation using reconstructions from https://t.co/Z9UcYMaOZr: https://t.co/hnQHVGdjnG
NeuroMorpho.org
January 28, 2025 at 2:39 PM
... visualising (#pyNeuroML, #OSB, #NeuroML-DB), simulating (#NEURON, #NetPyNE, #Brian, #PyNN, #NEST, #MOOSE, #EDEN), model fitting/optimisation (#NeuroTune, #BluePyOpt, #NetPyNE), sharing and reusing of models (#OSB, NeuroML-DB, #NeuroMorpho.org). 11/x
You can also create new model elements if existing ones aren’t enough AND because NeuroML is designed to be modular and hierarchical, ALL model elements are independent and can be reused in any NeuroML models. See the full specification here: docs.neuroml.org/Userdocs/Spe... 9/x
Schema/Specification — NeuroML Documentation
docs.neuroml.org
January 28, 2025 at 2:39 PM
You can also create new model elements if existing ones aren’t enough AND because NeuroML is designed to be modular and hierarchical, ALL model elements are independent and can be reused in any NeuroML models. See the full specification here: docs.neuroml.org/Userdocs/Spe... 9/x