Check out our new release on BioRxiv
co-lead by @pm-mueller.bsky.social
👉 rb.gy/lnrizk
special🙏 to
Severine Kunz #MDC
@leventallab.bsky.social
@andimicroscopy.bsky.social
@ewerslab.bsky.social and Kedar Narayan @NCI CCR VolumeEM
Are the days of discovering new cellular structures over?? /1
co-lead by @pm-mueller.bsky.social
👉 rb.gy/lnrizk
special🙏 to
Severine Kunz #MDC
@leventallab.bsky.social
@andimicroscopy.bsky.social
@ewerslab.bsky.social and Kedar Narayan @NCI CCR VolumeEM
Are the days of discovering new cellular structures over?? /1
April 15, 2026 at 4:52 PM
Check out our new release on BioRxiv
co-lead by @pm-mueller.bsky.social
👉 rb.gy/lnrizk
special🙏 to
Severine Kunz #MDC
@leventallab.bsky.social
@andimicroscopy.bsky.social
@ewerslab.bsky.social and Kedar Narayan @NCI CCR VolumeEM
Are the days of discovering new cellular structures over?? /1
co-lead by @pm-mueller.bsky.social
👉 rb.gy/lnrizk
special🙏 to
Severine Kunz #MDC
@leventallab.bsky.social
@andimicroscopy.bsky.social
@ewerslab.bsky.social and Kedar Narayan @NCI CCR VolumeEM
Are the days of discovering new cellular structures over?? /1
Big news! volumeEM has been ranked the second most requested technology of 2024 in Biological Imaging in the latest Euro-Bioimaging Annual Report!
📖 Read the full report here: www.eurobioimaging.eu/news/euro-bi...
#volumeEM
📖 Read the full report here: www.eurobioimaging.eu/news/euro-bi...
#volumeEM
July 22, 2025 at 12:38 PM
Big news! volumeEM has been ranked the second most requested technology of 2024 in Biological Imaging in the latest Euro-Bioimaging Annual Report!
📖 Read the full report here: www.eurobioimaging.eu/news/euro-bi...
#volumeEM
📖 Read the full report here: www.eurobioimaging.eu/news/euro-bi...
#volumeEM
Ctenophores possess a unique aboral organ that acts as a multisensory center, controlling complex behaviors. We’ve now created a ctenophore model integrated with our 3D volume EM data. Puts it into perspective.
Check out our recent work here: www.biorxiv.org/content/10.1...
#ctenophores #volumeEM
Check out our recent work here: www.biorxiv.org/content/10.1...
#ctenophores #volumeEM
August 7, 2025 at 8:18 AM
Ctenophores possess a unique aboral organ that acts as a multisensory center, controlling complex behaviors. We’ve now created a ctenophore model integrated with our 3D volume EM data. Puts it into perspective.
Check out our recent work here: www.biorxiv.org/content/10.1...
#ctenophores #volumeEM
Check out our recent work here: www.biorxiv.org/content/10.1...
#ctenophores #volumeEM
🚨 SAVE THE DATE 🚨
Inaugural CCP-volumeEM Community Meeting, 3rd November 2025 at @crick.ac.uk in London
"Towards a collaborative computational community for volume EM"
Timings: 12pm - 5.30pm, followed by networking reception
#volumeEM #BioImageAnalysis #VEM #CCPvolumeEM #CoSeC
Inaugural CCP-volumeEM Community Meeting, 3rd November 2025 at @crick.ac.uk in London
"Towards a collaborative computational community for volume EM"
Timings: 12pm - 5.30pm, followed by networking reception
#volumeEM #BioImageAnalysis #VEM #CCPvolumeEM #CoSeC
July 9, 2025 at 3:22 PM
🚨 SAVE THE DATE 🚨
Inaugural CCP-volumeEM Community Meeting, 3rd November 2025 at @crick.ac.uk in London
"Towards a collaborative computational community for volume EM"
Timings: 12pm - 5.30pm, followed by networking reception
#volumeEM #BioImageAnalysis #VEM #CCPvolumeEM #CoSeC
Inaugural CCP-volumeEM Community Meeting, 3rd November 2025 at @crick.ac.uk in London
"Towards a collaborative computational community for volume EM"
Timings: 12pm - 5.30pm, followed by networking reception
#volumeEM #BioImageAnalysis #VEM #CCPvolumeEM #CoSeC
If you want to learn the latest developments in volumeEM from the experts, with hands-on experience on our instruments @embl.org, this course is for you! 🔬
🔬 The practical course #EMBOvEM is open for registration 👉 https://s.embl.org/vem25-01-bl
You will gain theoretical and hands-on knowledge on the three main techniques for volume EM – microtome-based serial block-face SEM, focused ion beam SEM, and array tomography.
#vEM #Microscopy
You will gain theoretical and hands-on knowledge on the three main techniques for volume EM – microtome-based serial block-face SEM, focused ion beam SEM, and array tomography.
#vEM #Microscopy
April 24, 2025 at 12:17 PM
If you want to learn the latest developments in volumeEM from the experts, with hands-on experience on our instruments @embl.org, this course is for you! 🔬
#FocalPlaneCorrespondent Daniel Doucet interviews Kedar Narayan, the 2025 recipient of the Alan Agar @royalmicrosoc.bsky.social Award for Electron Microscopy. We learn about #volumeEM, big data challenges and the vEM community.
focalplane.biologists.com/2024/12/14/v...
focalplane.biologists.com/2024/12/14/v...
VolumeEM: An Interview with Kedar Narayan - FocalPlane
VolumeEM: An Interview with Kedar Narayan - Interviews
focalplane.biologists.com
December 17, 2024 at 1:28 PM
#FocalPlaneCorrespondent Daniel Doucet interviews Kedar Narayan, the 2025 recipient of the Alan Agar @royalmicrosoc.bsky.social Award for Electron Microscopy. We learn about #volumeEM, big data challenges and the vEM community.
focalplane.biologists.com/2024/12/14/v...
focalplane.biologists.com/2024/12/14/v...
Another reminder, we are soon reaching the max number of participants so now is a good time to register #volumeEM
The next GRC on volume Electron Microscopy is coming soon. Don't miss this opportunity and apply now as the number of seats is limited. #volumeEM
www.grc.org/volume-elect...
As I am new to bsky, please share widely (do we still say retweet?). 🙏
www.grc.org/volume-elect...
As I am new to bsky, please share widely (do we still say retweet?). 🙏
2025 Volume Electron Microscopy Conference GRC
The 2025 Gordon Research Conference on Volume Electron Microscopy will be held in Castelldefels, Barcelona Spain. Apply today to reserve your spot.
www.grc.org
January 24, 2025 at 11:31 AM
Another reminder, we are soon reaching the max number of participants so now is a good time to register #volumeEM
Join us on Friday, December 20, at 13:00 CET, for the Virtual Pub/VolumeEM Series with the VolumeEM Community.
Featuring Marie Vancová et al: "Optimising Volume Electron Microscopy: Imaging and Analysis Strategies at the Laboratory for Electron Microscopy"
Everyone is welcome!
bit.ly/41erlF0
Featuring Marie Vancová et al: "Optimising Volume Electron Microscopy: Imaging and Analysis Strategies at the Laboratory for Electron Microscopy"
Everyone is welcome!
bit.ly/41erlF0
Optimising Volume Electron Microscopy: Imaging and Analysis Strategies at the Laboratory for Electron Microscopy, České Budějovice
Please join us on Friday, December 20, at 13:00 CET, for the Virtual Pub/VolumeEM Series with the VolumeEM Community. Everyone is welcome!
bit.ly
December 5, 2024 at 3:07 PM
Join us on Friday, December 20, at 13:00 CET, for the Virtual Pub/VolumeEM Series with the VolumeEM Community.
Featuring Marie Vancová et al: "Optimising Volume Electron Microscopy: Imaging and Analysis Strategies at the Laboratory for Electron Microscopy"
Everyone is welcome!
bit.ly/41erlF0
Featuring Marie Vancová et al: "Optimising Volume Electron Microscopy: Imaging and Analysis Strategies at the Laboratory for Electron Microscopy"
Everyone is welcome!
bit.ly/41erlF0
Our first 'Show & Tell Series' webinar, presented last week, is now available on YouTube.
Watch here: www.youtube.com/watch?v=E-pi...
We hope it’s useful to the community - please share with anyone who may be interested #VolumeEM #Bioimaging
Watch here: www.youtube.com/watch?v=E-pi...
We hope it’s useful to the community - please share with anyone who may be interested #VolumeEM #Bioimaging
A brief introduction to the use of containers for reproducible image analysis with Dr Martin Jones
YouTube video by CCP-volumeEM
www.youtube.com
March 2, 2026 at 11:16 AM
Our first 'Show & Tell Series' webinar, presented last week, is now available on YouTube.
Watch here: www.youtube.com/watch?v=E-pi...
We hope it’s useful to the community - please share with anyone who may be interested #VolumeEM #Bioimaging
Watch here: www.youtube.com/watch?v=E-pi...
We hope it’s useful to the community - please share with anyone who may be interested #VolumeEM #Bioimaging
Yesterday.. our #CLEM with Julia Gutjahr and Antal Rot was featured in the main Science webpage....☺️ Nice to see #correlativemicroscopy and #volumeEM up front and centre.
www.science.org/doi/10.1126/...
www.science.org/doi/10.1126/...
June 18, 2025 at 6:34 PM
Yesterday.. our #CLEM with Julia Gutjahr and Antal Rot was featured in the main Science webpage....☺️ Nice to see #correlativemicroscopy and #volumeEM up front and centre.
www.science.org/doi/10.1126/...
www.science.org/doi/10.1126/...
Missed our latest CCP-volumeEM Show and Tell webinar? Dr Kimberly Meechan’s talk on Good practices for image analysis software is now available to watch on YouTube: www.youtube.com/watch?v=HHJJ...
Good practices for image analysis software with Dr Kimberly Meechan
YouTube video by CCP-volumeEM
www.youtube.com
March 25, 2026 at 11:50 AM
Missed our latest CCP-volumeEM Show and Tell webinar? Dr Kimberly Meechan’s talk on Good practices for image analysis software is now available to watch on YouTube: www.youtube.com/watch?v=HHJJ...
Now available on our YouTube channel: Chris Barnes’ CCP-volumeEM Show & Tell webinar, “OME-Zarr: A Next Generation File Format for FAIR Bioimaging Data”.
Catch up here: youtu.be/HsqH6RAcJps?...
Catch up here: youtu.be/HsqH6RAcJps?...
OME-Zarr: A next generation file format for FAIR bioimaging data with Chris Barnes
YouTube video by CCP-volumeEM
youtu.be
June 2, 2026 at 11:08 AM
Now available on our YouTube channel: Chris Barnes’ CCP-volumeEM Show & Tell webinar, “OME-Zarr: A Next Generation File Format for FAIR Bioimaging Data”.
Catch up here: youtu.be/HsqH6RAcJps?...
Catch up here: youtu.be/HsqH6RAcJps?...
We now have a mailing list for anyone who'd like to get involved with the volume EM collaborative computational community!
Sign up at bit.ly/ccp-volume-em to hear all the latest news and opportunities
Sign up at bit.ly/ccp-volume-em to hear all the latest news and opportunities
June 27, 2025 at 9:41 PM
Introducing the volumeEM Bluesky Starter Pack 🚀
featuring relevant accounts, feeds and resources
To be included in the first edition of the volumeEM Bluesky starter pack, please either:
Fill out our spreadsheet form (1 min to fill) forms.gle/dTnkUm7G2B2N...
or
Email us at vemcommunity@gmail.com
featuring relevant accounts, feeds and resources
To be included in the first edition of the volumeEM Bluesky starter pack, please either:
Fill out our spreadsheet form (1 min to fill) forms.gle/dTnkUm7G2B2N...
or
Email us at vemcommunity@gmail.com
🦋🚀 Bluesky starter pack
Join Us on Bluesky! 📱@volumeem1.bsky.social
We're excited to announce that volumeEM is now on Bluesky! Follow us to stay updated on the latest developments in volume electron microscopy and connect w...
forms.gle
January 31, 2025 at 3:43 PM
Introducing the volumeEM Bluesky Starter Pack 🚀
featuring relevant accounts, feeds and resources
To be included in the first edition of the volumeEM Bluesky starter pack, please either:
Fill out our spreadsheet form (1 min to fill) forms.gle/dTnkUm7G2B2N...
or
Email us at vemcommunity@gmail.com
featuring relevant accounts, feeds and resources
To be included in the first edition of the volumeEM Bluesky starter pack, please either:
Fill out our spreadsheet form (1 min to fill) forms.gle/dTnkUm7G2B2N...
or
Email us at vemcommunity@gmail.com
Our first #CCPvolumeEM #hackathon is underway, with some amazing merch! We're looking at building community resources and knowledge for the use of #NGFF in #volumeEM #BioImageAnalysis
#OMEZarr #OMENGFF @cosec-ukri.bsky.social
#OMEZarr #OMENGFF @cosec-ukri.bsky.social
March 12, 2026 at 9:26 AM
Our first #CCPvolumeEM #hackathon is underway, with some amazing merch! We're looking at building community resources and knowledge for the use of #NGFF in #volumeEM #BioImageAnalysis
#OMEZarr #OMENGFF @cosec-ukri.bsky.social
#OMEZarr #OMENGFF @cosec-ukri.bsky.social
Exciting next steps in #volumeEM data analysis! A way to remove the data bottleneck..🍾👏 #mmc2025
@ccp-volumeem.bsky.social @martinjones.bsky.social
@ccp-volumeem.bsky.social @martinjones.bsky.social
July 2, 2025 at 2:48 PM
Exciting next steps in #volumeEM data analysis! A way to remove the data bottleneck..🍾👏 #mmc2025
@ccp-volumeem.bsky.social @martinjones.bsky.social
@ccp-volumeem.bsky.social @martinjones.bsky.social
This will be on Friday next week. I will talk about our beta cell work and the joy of finding new things in volume EM data. #volumeEM
Next Euro-Bioimaging Virtual Pub/volumeEM Series!
Join Andreas Müller @andimicroscopy.bsky.social from Paul Langerhans Institute, TU Dresden, for a talk on "The Exploratory Potential of Volume Electron Microscopy"!
🗓️ June 20th, 2025
⏰ 13:00 CEST
🔗 Register: www.eurobioimaging.eu/events/explo...
Join Andreas Müller @andimicroscopy.bsky.social from Paul Langerhans Institute, TU Dresden, for a talk on "The Exploratory Potential of Volume Electron Microscopy"!
🗓️ June 20th, 2025
⏰ 13:00 CEST
🔗 Register: www.eurobioimaging.eu/events/explo...
June 10, 2025 at 1:37 PM
This will be on Friday next week. I will talk about our beta cell work and the joy of finding new things in volume EM data. #volumeEM
Volume EM meets synthetic biology
Matthew Lee, Judith Mantell, Martin Warren, Paul Verkade and colleagues use serial section Transmission Electron Tomography (ss-ET) to visualise synthetic ‘cytoscaffolds’ in bacteria.
focalplane.biologists.com/2025/06/27/v...
@volumeem1.bsky.social 🔬
Matthew Lee, Judith Mantell, Martin Warren, Paul Verkade and colleagues use serial section Transmission Electron Tomography (ss-ET) to visualise synthetic ‘cytoscaffolds’ in bacteria.
focalplane.biologists.com/2025/06/27/v...
@volumeem1.bsky.social 🔬
volume EM visualisation of synthetic scaffolds in bacteria - FocalPlane
volume EM visualisation of synthetic scaffolds in bacteria - Volume EM
focalplane.biologists.com
July 10, 2025 at 8:44 PM
🎥 New #volumeEM Video Alert: AI Segmentation in Volume Electron Microscopy! www.youtube.com/watch?v=nIoz...
Segmentation is key to analyzing 3D volume EM data. Learn how semantic, instance, and panoptic methods isolate structures like mitochondria, nuclei, and cytoplasm in complex tissues.
Segmentation is key to analyzing 3D volume EM data. Learn how semantic, instance, and panoptic methods isolate structures like mitochondria, nuclei, and cytoplasm in complex tissues.
AI Segmentation in Volume Electron Microscopy
YouTube video by Volume EM Community
www.youtube.com
May 16, 2025 at 3:50 AM
🎥 New #volumeEM Video Alert: AI Segmentation in Volume Electron Microscopy! www.youtube.com/watch?v=nIoz...
Segmentation is key to analyzing 3D volume EM data. Learn how semantic, instance, and panoptic methods isolate structures like mitochondria, nuclei, and cytoplasm in complex tissues.
Segmentation is key to analyzing 3D volume EM data. Learn how semantic, instance, and panoptic methods isolate structures like mitochondria, nuclei, and cytoplasm in complex tissues.
Hey #neuroskyence #Neuroscience peeps
Neuroscientist, #VolumeEM, #Connectomics, #Photographer here.
Working to get Bsky lifeboats to as many science peeps on this platform from Twitter as possible.
Neuroscientist, #VolumeEM, #Connectomics, #Photographer here.
Working to get Bsky lifeboats to as many science peeps on this platform from Twitter as possible.
July 31, 2023 at 4:43 PM
Hey #neuroskyence #Neuroscience peeps
Neuroscientist, #VolumeEM, #Connectomics, #Photographer here.
Working to get Bsky lifeboats to as many science peeps on this platform from Twitter as possible.
Neuroscientist, #VolumeEM, #Connectomics, #Photographer here.
Working to get Bsky lifeboats to as many science peeps on this platform from Twitter as possible.
We are hiring! We seek a motivated postdoc to investigate the ribosomal mechanisms underpinning dormancy and awakening across eukaryotes, using cutting-edge confocal microscopy, volumeEM, and omics. @lsiexeter.bsky.social. Interested? DM me or apply via: jobs.exeter.ac.uk/hrpr_webrecr...
January 28, 2025 at 3:00 PM
We are hiring! We seek a motivated postdoc to investigate the ribosomal mechanisms underpinning dormancy and awakening across eukaryotes, using cutting-edge confocal microscopy, volumeEM, and omics. @lsiexeter.bsky.social. Interested? DM me or apply via: jobs.exeter.ac.uk/hrpr_webrecr...
🔎🌍#volumeEM facility spotted in
Max-Planck-Institute for Multidisciplinary Sciences!
with FIB-SEM, Automated tape sectioning and (sAT)
Website ⬇
www.mpinat.mpg.de/em-moebius
____________________________________
Global vEM map ⬇
bit.ly/3xKN5bD
Add your #volumeEM facility ⬇
bit.ly/3EogwUw
Max-Planck-Institute for Multidisciplinary Sciences!
with FIB-SEM, Automated tape sectioning and (sAT)
Website ⬇
www.mpinat.mpg.de/em-moebius
____________________________________
Global vEM map ⬇
bit.ly/3xKN5bD
Add your #volumeEM facility ⬇
bit.ly/3EogwUw
February 27, 2025 at 8:36 AM
🔎🌍#volumeEM facility spotted in
Max-Planck-Institute for Multidisciplinary Sciences!
with FIB-SEM, Automated tape sectioning and (sAT)
Website ⬇
www.mpinat.mpg.de/em-moebius
____________________________________
Global vEM map ⬇
bit.ly/3xKN5bD
Add your #volumeEM facility ⬇
bit.ly/3EogwUw
Max-Planck-Institute for Multidisciplinary Sciences!
with FIB-SEM, Automated tape sectioning and (sAT)
Website ⬇
www.mpinat.mpg.de/em-moebius
____________________________________
Global vEM map ⬇
bit.ly/3xKN5bD
Add your #volumeEM facility ⬇
bit.ly/3EogwUw
It has been fun watching the field of connectomics which we built tools to understand how neurons are connected to one another, influence other fields in science like oncology (cancer), and development, and... #Connectomics has become #VolumeEM as a field.
In @jcb.org, Bharathan, Kowalczyk et al. provide the first comprehensive description of the 3D desmosome in A431 epidermoid carcinoma, human mammary epithelial cells, and airway epithelia in volume electron microscopy datasets. rupress.org/jcb/article/...
#Adhesion #StructuralBiology
#Adhesion #StructuralBiology
August 5, 2026 at 5:39 PM
It has been fun watching the field of connectomics which we built tools to understand how neurons are connected to one another, influence other fields in science like oncology (cancer), and development, and... #Connectomics has become #VolumeEM as a field.
NEW! Hydra Bio Plasma-FIB features AI protocols for bio specimens. Capture high-res 3D data from cryo-preserved or resin-embedded samples & generate high-quality cryo lamellae. Register for June 24 webinar to learn from users how they've enhanced their #volumeEM and #teamtomo prep. ter.li/d8b427
May 30, 2025 at 4:47 PM
NEW! Hydra Bio Plasma-FIB features AI protocols for bio specimens. Capture high-res 3D data from cryo-preserved or resin-embedded samples & generate high-quality cryo lamellae. Register for June 24 webinar to learn from users how they've enhanced their #volumeEM and #teamtomo prep. ter.li/d8b427
If you work in #VolumeEM, please fill in our survey to help us build a Collaborative Computational Project for volumeEM!
Survey link: forms.office.com/e/eMAJGCKUnc
we're aiming to identify the needs of the community in order to build a roadmap for all-things data-related in #vEM
Survey link: forms.office.com/e/eMAJGCKUnc
we're aiming to identify the needs of the community in order to build a roadmap for all-things data-related in #vEM
May 29, 2025 at 7:14 PM
If you work in #VolumeEM, please fill in our survey to help us build a Collaborative Computational Project for volumeEM!
Survey link: forms.office.com/e/eMAJGCKUnc
we're aiming to identify the needs of the community in order to build a roadmap for all-things data-related in #vEM
Survey link: forms.office.com/e/eMAJGCKUnc
we're aiming to identify the needs of the community in order to build a roadmap for all-things data-related in #vEM