Excited to see our preprint out! It was great to recently presented it as a poster at hhmi Janelia Research Campus at the No Brainer: Functional mapping of the PNS conference.
Collaboration between Luke Noon and @jemimaburden.bsky.social 🔬👏🏼 #volumeEM www.biorxiv.org/content/10.6...
Collaboration between Luke Noon and @jemimaburden.bsky.social 🔬👏🏼 #volumeEM www.biorxiv.org/content/10.6...
November 2, 2026 at 12:25 PM
Excited to see our preprint out! It was great to recently presented it as a poster at hhmi Janelia Research Campus at the No Brainer: Functional mapping of the PNS conference.
Collaboration between Luke Noon and @jemimaburden.bsky.social 🔬👏🏼 #volumeEM www.biorxiv.org/content/10.6...
Collaboration between Luke Noon and @jemimaburden.bsky.social 🔬👏🏼 #volumeEM www.biorxiv.org/content/10.6...
✨ What an incredible week for the global vEM community!
Last week, the 2nd volumeEM Technology Forum brought together around 200 attendees, including researchers, innovators, and technology experts from around the world, at Peking University in Beijing, China, from October 11–15, 2026.
Last week, the 2nd volumeEM Technology Forum brought together around 200 attendees, including researchers, innovators, and technology experts from around the world, at Peking University in Beijing, China, from October 11–15, 2026.
October 22, 2026 at 4:06 PM
✨ What an incredible week for the global vEM community!
Last week, the 2nd volumeEM Technology Forum brought together around 200 attendees, including researchers, innovators, and technology experts from around the world, at Peking University in Beijing, China, from October 11–15, 2026.
Last week, the 2nd volumeEM Technology Forum brought together around 200 attendees, including researchers, innovators, and technology experts from around the world, at Peking University in Beijing, China, from October 11–15, 2026.
📣 CCP-volumeEM Show & Tell Webinar
Join us on 20 Oct for ‘Data stewardship and biological imaging data management: a summary of FAIR data life cycle’ with Dr Aybuke Kupcu Yoldas (EMBL-EBI).
💻 Online
🔗 www.ccp-volumeem.ac.uk/showandtell/...
#VolumeEM #Bioimaging #FAIRData
Join us on 20 Oct for ‘Data stewardship and biological imaging data management: a summary of FAIR data life cycle’ with Dr Aybuke Kupcu Yoldas (EMBL-EBI).
💻 Online
🔗 www.ccp-volumeem.ac.uk/showandtell/...
#VolumeEM #Bioimaging #FAIRData
Upcoming - 'Data Stewardship...' with Dr Kupcu Yoldas (20th October 2026) — CCP in vEM
www.ccp-volumeem.ac.uk
October 6, 2026 at 9:06 AM
📣 CCP-volumeEM Show & Tell Webinar
Join us on 20 Oct for ‘Data stewardship and biological imaging data management: a summary of FAIR data life cycle’ with Dr Aybuke Kupcu Yoldas (EMBL-EBI).
💻 Online
🔗 www.ccp-volumeem.ac.uk/showandtell/...
#VolumeEM #Bioimaging #FAIRData
Join us on 20 Oct for ‘Data stewardship and biological imaging data management: a summary of FAIR data life cycle’ with Dr Aybuke Kupcu Yoldas (EMBL-EBI).
💻 Online
🔗 www.ccp-volumeem.ac.uk/showandtell/...
#VolumeEM #Bioimaging #FAIRData
Remote users connect to virtual machines provisioned with reproducible software containers pulled from a publicly hosted repository.
"From developer to microscopist: Improving the accessibility of volume electron microscopy software" is free-to-view here> doi.org/10.1111/jmi....
"From developer to microscopist: Improving the accessibility of volume electron microscopy software" is free-to-view here> doi.org/10.1111/jmi....
From developer to microscopist: Improving the accessibility of volume electron microscopy software
Volume electron microscopy (volumeEM) refers to a group of recently developed imaging approaches that use scanning and transmission electron microscopy to visualise cells and tissues at high resoluti...
doi.org
September 30, 2026 at 10:59 AM
Remote users connect to virtual machines provisioned with reproducible software containers pulled from a publicly hosted repository.
"From developer to microscopist: Improving the accessibility of volume electron microscopy software" is free-to-view here> doi.org/10.1111/jmi....
"From developer to microscopist: Improving the accessibility of volume electron microscopy software" is free-to-view here> doi.org/10.1111/jmi....
The Town Hall will feature:
🔬 Updates from the volumeEM Community working groups
🔬 Updates from other related working groups, including ccp-volumeEM, FoundingGIDE, and Array Tomography WG
🌍 Updates from international microscopy communities
📊 Our community survey
🔬 Updates from the volumeEM Community working groups
🔬 Updates from other related working groups, including ccp-volumeEM, FoundingGIDE, and Array Tomography WG
🌍 Updates from international microscopy communities
📊 Our community survey
September 28, 2026 at 11:50 PM
The Town Hall will feature:
🔬 Updates from the volumeEM Community working groups
🔬 Updates from other related working groups, including ccp-volumeEM, FoundingGIDE, and Array Tomography WG
🌍 Updates from international microscopy communities
📊 Our community survey
🔬 Updates from the volumeEM Community working groups
🔬 Updates from other related working groups, including ccp-volumeEM, FoundingGIDE, and Array Tomography WG
🌍 Updates from international microscopy communities
📊 Our community survey
📢 2026 vEM Town Hall
The 2026 vEM Town Hall will be held on Thursday October 15th from 15:00-17:40 (UTC+8) as part of the vEM Technology Forum in Beijing, China.
👉 For more details and to register, please visit our website:
🔗 www.volumeem.org/2026-town-ha...
The 2026 vEM Town Hall will be held on Thursday October 15th from 15:00-17:40 (UTC+8) as part of the vEM Technology Forum in Beijing, China.
👉 For more details and to register, please visit our website:
🔗 www.volumeem.org/2026-town-ha...
2026 Town Hall Meeting
The 2026 vEM Town Hall will be held on Thursday October 15th from 15:00-17:40 (UTC+8) as part of the vEM Technology Forum. There will be updates from the volumeEM Community Initiative working groups,....
www.volumeem.org
September 28, 2026 at 11:50 PM
📢 2026 vEM Town Hall
The 2026 vEM Town Hall will be held on Thursday October 15th from 15:00-17:40 (UTC+8) as part of the vEM Technology Forum in Beijing, China.
👉 For more details and to register, please visit our website:
🔗 www.volumeem.org/2026-town-ha...
The 2026 vEM Town Hall will be held on Thursday October 15th from 15:00-17:40 (UTC+8) as part of the vEM Technology Forum in Beijing, China.
👉 For more details and to register, please visit our website:
🔗 www.volumeem.org/2026-town-ha...
Now on YouTube: AI OnDemand (AIoD): An extendable, user-friendly framework for segmenting images at scale
In this webinar, Dr Cameron Shand introduces AIoD and shows how it can make deep-learning image analysis more accessible, scalable and reproducible.
Watch here: www.youtube.com/watch?v=2yWh...
In this webinar, Dr Cameron Shand introduces AIoD and shows how it can make deep-learning image analysis more accessible, scalable and reproducible.
Watch here: www.youtube.com/watch?v=2yWh...
AI OnDemand:An extendable, user-friendly framework for segmenting images at scale with Cameron Shand
YouTube video by CCP-volumeEM
www.youtube.com
September 24, 2026 at 10:48 AM
Now on YouTube: AI OnDemand (AIoD): An extendable, user-friendly framework for segmenting images at scale
In this webinar, Dr Cameron Shand introduces AIoD and shows how it can make deep-learning image analysis more accessible, scalable and reproducible.
Watch here: www.youtube.com/watch?v=2yWh...
In this webinar, Dr Cameron Shand introduces AIoD and shows how it can make deep-learning image analysis more accessible, scalable and reproducible.
Watch here: www.youtube.com/watch?v=2yWh...
Missed our #IMC21 poster? We’ve got you covered! Discover how automated #SpecimenPrep can deliver:
➡️ Sample-to-sample consistency
➡️ Batch-to-batch reproducibility
➡️ Faster processing
➡️ High-quality results
Comment below for the poster!
#Microscopy #ElectronMicroscopy #VolumeEM #TEM #SamplePrep
➡️ Sample-to-sample consistency
➡️ Batch-to-batch reproducibility
➡️ Faster processing
➡️ High-quality results
Comment below for the poster!
#Microscopy #ElectronMicroscopy #VolumeEM #TEM #SamplePrep
September 2, 2026 at 4:48 PM
Missed our #IMC21 poster? We’ve got you covered! Discover how automated #SpecimenPrep can deliver:
➡️ Sample-to-sample consistency
➡️ Batch-to-batch reproducibility
➡️ Faster processing
➡️ High-quality results
Comment below for the poster!
#Microscopy #ElectronMicroscopy #VolumeEM #TEM #SamplePrep
➡️ Sample-to-sample consistency
➡️ Batch-to-batch reproducibility
➡️ Faster processing
➡️ High-quality results
Comment below for the poster!
#Microscopy #ElectronMicroscopy #VolumeEM #TEM #SamplePrep
🌈 A rainbow welcomed the #IMC21 Sunday opening reception! Today stop by to see how automated #SpecimenPrep delivers sample-to-sample consistency, batch-to-batch reproducibility, time savings & high-quality results.
📍 Poster IP1 194 | Aug 31, 17:30–18:30
#Microscopy #ElectronMicroscopy #VolumeEM #TEM
📍 Poster IP1 194 | Aug 31, 17:30–18:30
#Microscopy #ElectronMicroscopy #VolumeEM #TEM
August 31, 2026 at 1:21 PM
🌈 A rainbow welcomed the #IMC21 Sunday opening reception! Today stop by to see how automated #SpecimenPrep delivers sample-to-sample consistency, batch-to-batch reproducibility, time savings & high-quality results.
📍 Poster IP1 194 | Aug 31, 17:30–18:30
#Microscopy #ElectronMicroscopy #VolumeEM #TEM
📍 Poster IP1 194 | Aug 31, 17:30–18:30
#Microscopy #ElectronMicroscopy #VolumeEM #TEM
[WEBINAR] Join the next France volumeEM WebCafe ☕
This edition will focus on 3D imaging of bone marrow megakaryocytes, featuring Dr. Anita Michel (Head of the EM plateform MicroEleCS - UMRS 1255).
📅 When? December, 18th - 13:00
🔗 How to join? bit.ly/3KxXxgy
This edition will focus on 3D imaging of bone marrow megakaryocytes, featuring Dr. Anita Michel (Head of the EM plateform MicroEleCS - UMRS 1255).
📅 When? December, 18th - 13:00
🔗 How to join? bit.ly/3KxXxgy
December 8, 2025 at 3:45 PM
[WEBINAR] Join the next France volumeEM WebCafe ☕
This edition will focus on 3D imaging of bone marrow megakaryocytes, featuring Dr. Anita Michel (Head of the EM plateform MicroEleCS - UMRS 1255).
📅 When? December, 18th - 13:00
🔗 How to join? bit.ly/3KxXxgy
This edition will focus on 3D imaging of bone marrow megakaryocytes, featuring Dr. Anita Michel (Head of the EM plateform MicroEleCS - UMRS 1255).
📅 When? December, 18th - 13:00
🔗 How to join? bit.ly/3KxXxgy
📢Electron Microscopy Unit, Helsinki BioImaging, and ZEISS are organizing a symposium "Frontiers in Imaging: celebrating the EMBI-ZEISS partnership on volumeEM"
🗓️December 2-3, 2025
📍Institute of Biotechnology, University of Helsinki
🔗Program and registration link⤵️
www.helsinki.fi/en/infrastru...
🗓️December 2-3, 2025
📍Institute of Biotechnology, University of Helsinki
🔗Program and registration link⤵️
www.helsinki.fi/en/infrastru...
November 10, 2025 at 10:49 AM
📢Electron Microscopy Unit, Helsinki BioImaging, and ZEISS are organizing a symposium "Frontiers in Imaging: celebrating the EMBI-ZEISS partnership on volumeEM"
🗓️December 2-3, 2025
📍Institute of Biotechnology, University of Helsinki
🔗Program and registration link⤵️
www.helsinki.fi/en/infrastru...
🗓️December 2-3, 2025
📍Institute of Biotechnology, University of Helsinki
🔗Program and registration link⤵️
www.helsinki.fi/en/infrastru...
My PhD thesis has officially been submitted to the examiners 🎉
I’m actively looking for postdoctoral fellowship opportunities working in:
- Neuroscience / Neurobiology
- Bioimaging with AI/ML
- Image analysis
#Postdoc #VolumeEM #Microscopy #Synchrotron #ImageAnalysis
I’m actively looking for postdoctoral fellowship opportunities working in:
- Neuroscience / Neurobiology
- Bioimaging with AI/ML
- Image analysis
#Postdoc #VolumeEM #Microscopy #Synchrotron #ImageAnalysis
May 13, 2026 at 3:45 AM
My PhD thesis has officially been submitted to the examiners 🎉
I’m actively looking for postdoctoral fellowship opportunities working in:
- Neuroscience / Neurobiology
- Bioimaging with AI/ML
- Image analysis
#Postdoc #VolumeEM #Microscopy #Synchrotron #ImageAnalysis
I’m actively looking for postdoctoral fellowship opportunities working in:
- Neuroscience / Neurobiology
- Bioimaging with AI/ML
- Image analysis
#Postdoc #VolumeEM #Microscopy #Synchrotron #ImageAnalysis
Beta cells hiding a neural secret? 🧠➡️🩸
See how @andimicroscopy.bsky.social used volume electron microscopy to reveal axo-ciliary synapses between beta cell cilia and pancreatic nerves—structures never before seen outside the brain!
Read more here 👉🏼 shorturl.at/EF3co
#DiabetesResearch #VolumeEM
See how @andimicroscopy.bsky.social used volume electron microscopy to reveal axo-ciliary synapses between beta cell cilia and pancreatic nerves—structures never before seen outside the brain!
Read more here 👉🏼 shorturl.at/EF3co
#DiabetesResearch #VolumeEM
Volume EM uncovers hidden tissue contacts - 2025 - Wiley Analytical Science
The largest repository of validated, free and subject-focused e-publications and online seminars in analytical science covering latest techniques, equipment, original research, editorials, and industr...
analyticalscience.wiley.com
September 16, 2025 at 7:41 AM
Beta cells hiding a neural secret? 🧠➡️🩸
See how @andimicroscopy.bsky.social used volume electron microscopy to reveal axo-ciliary synapses between beta cell cilia and pancreatic nerves—structures never before seen outside the brain!
Read more here 👉🏼 shorturl.at/EF3co
#DiabetesResearch #VolumeEM
See how @andimicroscopy.bsky.social used volume electron microscopy to reveal axo-ciliary synapses between beta cell cilia and pancreatic nerves—structures never before seen outside the brain!
Read more here 👉🏼 shorturl.at/EF3co
#DiabetesResearch #VolumeEM
Don´t miss Andreas talk today‼️ He will be speaking about his volume EM work in pancreatic beta cells.
#DiabetesResearch #volumeEM #BetaCells
👇👇👇
#DiabetesResearch #volumeEM #BetaCells
👇👇👇
This will be on Friday next week. I will talk about our beta cell work and the joy of finding new things in volume EM data. #volumeEM
Next Euro-Bioimaging Virtual Pub/volumeEM Series!
Join Andreas Müller @andimicroscopy.bsky.social from Paul Langerhans Institute, TU Dresden, for a talk on "The Exploratory Potential of Volume Electron Microscopy"!
🗓️ June 20th, 2025
⏰ 13:00 CEST
🔗 Register: www.eurobioimaging.eu/events/explo...
Join Andreas Müller @andimicroscopy.bsky.social from Paul Langerhans Institute, TU Dresden, for a talk on "The Exploratory Potential of Volume Electron Microscopy"!
🗓️ June 20th, 2025
⏰ 13:00 CEST
🔗 Register: www.eurobioimaging.eu/events/explo...
June 20, 2025 at 8:43 AM
Don´t miss Andreas talk today‼️ He will be speaking about his volume EM work in pancreatic beta cells.
#DiabetesResearch #volumeEM #BetaCells
👇👇👇
#DiabetesResearch #volumeEM #BetaCells
👇👇👇
Check out our new release on BioRxiv
co-lead by @pm-mueller.bsky.social
👉 rb.gy/lnrizk
special🙏 to
Severine Kunz #MDC
@leventallab.bsky.social
@andimicroscopy.bsky.social
@ewerslab.bsky.social and Kedar Narayan @NCI CCR VolumeEM
Are the days of discovering new cellular structures over?? /1
co-lead by @pm-mueller.bsky.social
👉 rb.gy/lnrizk
special🙏 to
Severine Kunz #MDC
@leventallab.bsky.social
@andimicroscopy.bsky.social
@ewerslab.bsky.social and Kedar Narayan @NCI CCR VolumeEM
Are the days of discovering new cellular structures over?? /1
April 15, 2026 at 4:52 PM
Check out our new release on BioRxiv
co-lead by @pm-mueller.bsky.social
👉 rb.gy/lnrizk
special🙏 to
Severine Kunz #MDC
@leventallab.bsky.social
@andimicroscopy.bsky.social
@ewerslab.bsky.social and Kedar Narayan @NCI CCR VolumeEM
Are the days of discovering new cellular structures over?? /1
co-lead by @pm-mueller.bsky.social
👉 rb.gy/lnrizk
special🙏 to
Severine Kunz #MDC
@leventallab.bsky.social
@andimicroscopy.bsky.social
@ewerslab.bsky.social and Kedar Narayan @NCI CCR VolumeEM
Are the days of discovering new cellular structures over?? /1
These are awesome! Do you guys in volumeEM ever use stereo pairs? That seems like it would be really useful in visualizing the 3d relationships of the structures
July 27, 2023 at 9:10 PM
These are awesome! Do you guys in volumeEM ever use stereo pairs? That seems like it would be really useful in visualizing the 3d relationships of the structures
Still time to register for the inaugural CCP-volumeEM Community Meeting at the Crick on 3rd November www.eventbrite.co.uk/e/towards-a-...
Towards a collaborative computational community for volumeEM
Join us for the inaugural CCP-volumeEM Community Meeting, bringing together researchers, microscopists, biologists and computer scientists.
www.eventbrite.co.uk
September 24, 2025 at 2:26 PM
Still time to register for the inaugural CCP-volumeEM Community Meeting at the Crick on 3rd November www.eventbrite.co.uk/e/towards-a-...
Join us for our next CCP-volumeEM Show & Tell:
'Napari software for 3D segmentation with the napari-zelda plugin' with Rocco D'Antuono
📅 Tue 30 June, 12:30 BST
🔗 Register: crick.zoom.us/webinar/regi...
🎓 Learn more: www.ccp-volumeem.ac.uk/showandtell/...
'Napari software for 3D segmentation with the napari-zelda plugin' with Rocco D'Antuono
📅 Tue 30 June, 12:30 BST
🔗 Register: crick.zoom.us/webinar/regi...
🎓 Learn more: www.ccp-volumeem.ac.uk/showandtell/...
Welcome! You are invited to join a webinar: CCP-volumeEM Show and Tell - June 2026. After registering, you will receive a confirmation email about joining the webinar.
'Napari software for 3D segmentation with the napari-zelda plugin' with Rocco D'Antuono
Abstract:
Bioimage analysis workflows allow the measurement of sample properties such as fluorescence intensit...
crick.zoom.us
June 23, 2026 at 8:53 AM
Join us for our next CCP-volumeEM Show & Tell:
'Napari software for 3D segmentation with the napari-zelda plugin' with Rocco D'Antuono
📅 Tue 30 June, 12:30 BST
🔗 Register: crick.zoom.us/webinar/regi...
🎓 Learn more: www.ccp-volumeem.ac.uk/showandtell/...
'Napari software for 3D segmentation with the napari-zelda plugin' with Rocco D'Antuono
📅 Tue 30 June, 12:30 BST
🔗 Register: crick.zoom.us/webinar/regi...
🎓 Learn more: www.ccp-volumeem.ac.uk/showandtell/...
In March, CCP-volumeEM hosted an OME-NGFF hackathon, bringing the community together to collaborate, share ideas and advance tools for volume electron microscopy. 🔬💻
Read about what we worked on and hear directly from two attendees about their experiences: www.ccp-volumeem.ac.uk/hackathons/h...
Read about what we worked on and hear directly from two attendees about their experiences: www.ccp-volumeem.ac.uk/hackathons/h...
OME-NGFF Hackathon March 2026 — CCP in vEM
www.ccp-volumeem.ac.uk
June 17, 2026 at 8:14 AM
In March, CCP-volumeEM hosted an OME-NGFF hackathon, bringing the community together to collaborate, share ideas and advance tools for volume electron microscopy. 🔬💻
Read about what we worked on and hear directly from two attendees about their experiences: www.ccp-volumeem.ac.uk/hackathons/h...
Read about what we worked on and hear directly from two attendees about their experiences: www.ccp-volumeem.ac.uk/hackathons/h...
🔬 Would you like to learn more about image analysis for Correlative Light and Electron Microscopy?
Join us at the Francis Crick Institute, London, for this CCP-volumeEM led initiative from 30 Nov–4 Dec 2026.
👉 Find out more: www.crick.ac.uk/whats-on/ima...
Join us at the Francis Crick Institute, London, for this CCP-volumeEM led initiative from 30 Nov–4 Dec 2026.
👉 Find out more: www.crick.ac.uk/whats-on/ima...
Image analysis for Correlative Light and Electron Microscopy (CLEM)
www.crick.ac.uk
June 3, 2026 at 8:24 AM
🔬 Would you like to learn more about image analysis for Correlative Light and Electron Microscopy?
Join us at the Francis Crick Institute, London, for this CCP-volumeEM led initiative from 30 Nov–4 Dec 2026.
👉 Find out more: www.crick.ac.uk/whats-on/ima...
Join us at the Francis Crick Institute, London, for this CCP-volumeEM led initiative from 30 Nov–4 Dec 2026.
👉 Find out more: www.crick.ac.uk/whats-on/ima...
Now available on our YouTube channel: Chris Barnes’ CCP-volumeEM Show & Tell webinar, “OME-Zarr: A Next Generation File Format for FAIR Bioimaging Data”.
Catch up here: youtu.be/HsqH6RAcJps?...
Catch up here: youtu.be/HsqH6RAcJps?...
OME-Zarr: A next generation file format for FAIR bioimaging data with Chris Barnes
YouTube video by CCP-volumeEM
youtu.be
June 2, 2026 at 11:08 AM
Now available on our YouTube channel: Chris Barnes’ CCP-volumeEM Show & Tell webinar, “OME-Zarr: A Next Generation File Format for FAIR Bioimaging Data”.
Catch up here: youtu.be/HsqH6RAcJps?...
Catch up here: youtu.be/HsqH6RAcJps?...
Join our next CCP-volumeEM Show & Tell webinar!
'OME-Zarr: A Next Generation File Format for FAIR bioimaging data' with Chris Barnes
📅 Tuesday 19 May, 12:30pm BST
💻 60-minute online talk
You can register here: crick.zoom.us/webinar/regi...
'OME-Zarr: A Next Generation File Format for FAIR bioimaging data' with Chris Barnes
📅 Tuesday 19 May, 12:30pm BST
💻 60-minute online talk
You can register here: crick.zoom.us/webinar/regi...
May 6, 2026 at 12:56 PM
Join our next CCP-volumeEM Show & Tell webinar!
'OME-Zarr: A Next Generation File Format for FAIR bioimaging data' with Chris Barnes
📅 Tuesday 19 May, 12:30pm BST
💻 60-minute online talk
You can register here: crick.zoom.us/webinar/regi...
'OME-Zarr: A Next Generation File Format for FAIR bioimaging data' with Chris Barnes
📅 Tuesday 19 May, 12:30pm BST
💻 60-minute online talk
You can register here: crick.zoom.us/webinar/regi...
Missed our April Show & Tell? Watch Dr Piper Fowler-Wright’s talk, “Jupyter Notebooks for Shareable Research Outputs” : a practical introduction to using notebooks for reproducible, well-documented research 🧪
🎥 www.youtube.com/watch?v=wzh4...
🎥 www.youtube.com/watch?v=wzh4...
Jupyter Notebooks for Shareable Research Outputs with Dr Piper Fowler-Wright
YouTube video by CCP-volumeEM
www.youtube.com
May 5, 2026 at 11:04 AM
Missed our April Show & Tell? Watch Dr Piper Fowler-Wright’s talk, “Jupyter Notebooks for Shareable Research Outputs” : a practical introduction to using notebooks for reproducible, well-documented research 🧪
🎥 www.youtube.com/watch?v=wzh4...
🎥 www.youtube.com/watch?v=wzh4...