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RNA modification papers
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Reposted by RNA modification papers
A mRNA methylation regulates pancreatic α-cell plasticity
To determine the expression levels of various m6A modulators in human pancreatic cells, we reanalysed the PANC-DB scRNA-seq dataset29,30, which contains data from over 2 × 105 human pancreatic cells (Extended Data Fig. 1a). Focusing on non-diabetic samples, we plotted expression levels of m6A modulators across different pancreatic cell types (Extended Data Fig. 1b). Interestingly, among the endocrine cells, human α-cells exhibited among the highest expression levels of m6A editors and reader proteins, particularly when compared with insulin-producing β-cells (Extended Data Fig. 1c). To investigate whether m6A modulates transcriptional variability, we analysed transcriptional noise (transcriptional variability) in human α- and β-cells using the PANC-DB scRNA-seq data and categorized genes as m6A-tagged or non-tagged (we defined m6A-tagged genes as having a significant peak that was enriched in IP over input at twofold or more with a false discovery rate (FDR) <0.05) based on our m6A-seq data from non-diabetic human islets21,22. We found that m6A-tagged genes exhibited lower transcriptional noise in both human α- and β-cells compared with non-m6A-tagged genes (Extended Data Fig. 1d). These findings suggest that m6A plays a role in fine-tuning transcription in α-cells and may regulate α-cell biology, a feature shared by β-cells and reported by us previously21...
www.nature.com
September 19, 2026 at 12:14 AM
RNA m6A methylation fine-tunes the jasmonic acid biosynthesis pathway to modulate plant aging

The Plant cell · Zhang et al.
doi.org/10.1093/plcell/koag287
#RNAsky #RNAmods
RNA m6A methylation fine-tunes the jasmonic acid biosynthesis pathway to modulate plant aging
The Plant cell · Zhang Y, Li P, Hua C, Ma J, Kong KN, Zhang S, Wu X, Loi J, Choi IKY, He C, Jang IC, Shen L.
doi.org
September 19, 2026 at 1:17 PM
Kaempferol attenuates type 2 diabetic osteoporosis via METTL3/YTHDF2-regulated PTEN m⁶A methylation and ferritinophagy-ferroptosis inhibition

Pharmacological research · Huang et al.
doi.org/10.1016/j.phrs.2026.108473
#RNAsky #RNAmods
Kaempferol attenuates type 2 diabetic osteoporosis via METTL3/YTHDF2-regulated PTEN m⁶A methylation and ferritinophagy-ferroptosis inhibition
Pharmacological research · Huang B, Chen J, Jia J, Lin H, Chen X, Guo Y, Chen Z, Su S, Huang C.
doi.org
September 19, 2026 at 1:17 PM
m6A mRNA methylation regulates pancreatic α-cell plasticity

Nature metabolism · De et al.
doi.org/10.1038/s42255-026-01591-z
#RNAsky #RNAmods
m6A mRNA methylation regulates pancreatic α-cell plasticity
Here we show that m6A is a key regulator of α-cell function and plasticity.
doi.org
September 19, 2026 at 1:17 PM
Demethylase FTO attenuates atherosclerotic plaque via upregulating ABCA1 and ABCG1 expression by targeting ATG5

Molecular medicine reports · Guo et al.
doi.org/10.3892/mmr.2026.14025
#RNAsky #RNAmods
Demethylase FTO attenuates atherosclerotic plaque via upregulating ABCA1 and ABCG1 expression by targeting ATG5
Molecular medicine reports · Guo F, He M, Li Y, Zhu K, Hu B.
doi.org
September 19, 2026 at 1:16 PM
Phosphate backbone epitranscriptomics: Discovery of natural RNA phosphorothioates and their writer machinery

Cell · Maman et al.
doi.org/10.1016/j.cell.2026.08.034
#RNAsky #RNAmods
Phosphate backbone epitranscriptomics: Discovery of natural RNA phosphorothioates and their writer machinery
Here, we develop sequencing- and mass spectrometry-based approaches to quantitatively map RNA PSs at single-nucleotide resolution.
doi.org
September 19, 2026 at 1:16 PM
Reposted by RNA modification papers
New paper out in @NatureMetabolism!

We show that loss of m⁶A disrupts pancreatic α-cell identity and promotes their transition toward immature β-cells.

My first as co-corresponding with lots of work from my new lab at @UChicago

www.nature.com/articles/s42...
m6A mRNA methylation regulates pancreatic α-cell plasticity - Nature Metabolism
m6A methylation acts as an epitranscriptomic regulator of endocrine cell identity in pancreatic islet alpha cells, with loss of m6A leading to impaired alpha cell identity, α- to β-cell conversion and...
www.nature.com
September 18, 2026 at 5:09 PM
METTL3 mitigates age-related hearing loss by inhibiting NF-κB-mediated inflammatory responses through the m6A modification of NFKBIA

Journal of molecular medicine (Berlin, Germany) · Tan et al.
doi.org/10.1007/s00109-026-02714-5
#RNAsky #RNAmods
METTL3 mitigates age-related hearing loss by inhibiting NF-κB-mediated inflammatory responses through the m6A modification of NFKBIA
Journal of molecular medicine (Berlin, Germany) · Tan J, Luo J, Li L, Chen D, Wang J, Ge C, Li P.
doi.org
September 18, 2026 at 9:06 PM
Regulation and function of the HPV16 CircE7 RNA

Journal of virology · Lee et al.
doi.org/10.1128/jvi.01284-26
#RNAsky #RNAmods
Regulation and function of the HPV16 CircE7 RNA
Here, we explored the regulation and function of circE7.
doi.org
September 18, 2026 at 9:06 PM
RBM15 Contributes to Bladder Carcinoma Progression via m6A-dependent Stabilization of IFI6 mRNA

Applied biochemistry and biotechnology · Zhang et al.
doi.org/10.1007/s12010-026-05924-2
#RNAsky #RNAmods
RBM15 Contributes to Bladder Carcinoma Progression via m6A-dependent Stabilization of IFI6 mRNA
Applied biochemistry and biotechnology · Zhang H, Yang Y, Liu Z, Zhao F, Liang G.
doi.org
September 18, 2026 at 9:05 PM
Dynamic reprogramming and A-to-I RNA editing in neutrophils in response to tumor induction

The Journal of biological chemistry · Cao et al.
doi.org/10.1016/j.jbc.2026.113569
#RNAsky #RNAmods
Dynamic reprogramming and A-to-I RNA editing in neutrophils in response to tumor induction
Here, we performed a time-resolved transcriptomic and RNA editome analysis of neutrophils co-cultured with three hepatocellular carcinoma (HCC) cell lines using 293T cells as control.
doi.org
September 18, 2026 at 9:05 PM
Reposted by RNA modification papers
Altered m6A methylation across eight reward- and motor-related brain regions in alcohol use disorder https://www.medrxiv.org/content/10.64898/2026.09.16.26363234v1
September 18, 2026 at 4:55 AM
RNA demethylase FTO uses conserved aromatic residues to recognize the mRNA 5' cap and promote efficient m6Am demethylation

The Journal of biological chemistry · Shimanski et al.
doi.org/10.1016/j.jbc.2026.113573
#RNAsky #RNAmods
RNA demethylase FTO uses conserved aromatic residues to recognize the mRNA 5' cap and promote efficient m6Am demethylation
Here we utilize molecular dynamics simulations of FTO-RNA cap complexes to identify conserved aromatic residues on the surface of FTO involved in 5' cap recognition.
doi.org
September 18, 2026 at 1:18 PM
Polystyrene microplastic uptake drives Inflammatory, Epitranscriptomic, and Metabolic Reprogramming in Human Aortic Endothelial cells

Environmental pollution (Barking, Essex : 1987) · Khan et al.
doi.org/10.1016/j.envpol.2026.129187
#RNAsky #RNAmods
Polystyrene microplastic uptake drives Inflammatory, Epitranscriptomic, and Metabolic Reprogramming in Human Aortic Endothelial cells
Environmental pollution (Barking, Essex : 1987) · Khan A, Koher G, Khan T, Grant K, Hudson S, Zheng G, Lee HY, Vidar WS, Morales-Shnaider F, Chen J, Darfour-Oduro KA, Bha
doi.org
September 18, 2026 at 1:17 PM
Transcript-wide m6A methylation defines the efficiency of cap-independent translation initiation

RNA (New York, N.Y.) · Smolin et al.
doi.org/10.1261/rna.081017.126
#RNAsky #RNAmods
Transcript-wide m6A methylation defines the efficiency of cap-independent translation initiation
Here, we combined ribosome profiling under conditions of mTOR inhibition and m⁶A mapping to identify distinct subsets of mRNAs that differ in their sensitivity to the suppression of cap-dependent initiation.
doi.org
September 18, 2026 at 1:17 PM
MiR-662 impairs C/D box snoRNA expression and rRNA 2'-O-ribose methylation marks

BJC reports · Filossi et al.
doi.org/10.1038/s44276-026-00247-5
#RNAsky #RNAmods
MiR-662 impairs C/D box snoRNA expression and rRNA 2'-O-ribose methylation marks
BJC reports · Filossi C, Isaac C, Jaafar M, Clézardin P, Moyret-Lalle C, Marcel V, Puppo M.
doi.org
September 18, 2026 at 1:17 PM
Sublethal heat stress-induced HSF4 upregulation via GRSF1 in an m6A-dependent manner in hepatocellular carcinoma

Chinese medical journal · Chen et al.
doi.org/10.1097/cm9.0000000000004188
#RNAsky #RNAmods
Sublethal heat stress-induced HSF4 upregulation via GRSF1 in an m6A-dependent manner in hepatocellular carcinoma
Chinese medical journal · Chen J, Tan Y, Xie W, Shi L, Quan H, Xiao H, Liu J, Mao X, Chen P, Luo J.
doi.org
September 18, 2026 at 1:16 PM
Reposted by RNA modification papers
Decoding thyroid cancer progression requires understanding #m6A‑regulated drivers.
IGF2BP2 is upregulated in #PapillaryThyroidCarcinoma, promoting malignancy via SPRY1 and MAPK/MEK/ERK signaling, enhanced by TGF‑β/SMAD4.
#OpenAccess in #GenesAndDiseases: doi.org/10.1016/j.ge...
September 17, 2026 at 4:20 PM
Oscillatory shear stress-induced endothelial extracellular vesicles exacerbate aortic valve calcification

Cardiovascular research · Chen et al.
doi.org/10.1093/cvr/cvag205
#RNAsky #RNAmods
Oscillatory shear stress-induced endothelial extracellular vesicles exacerbate aortic valve calcification
Cardiovascular research · Chen S, Shang X, Xu J, Fan Z, Zhang S, Li R, Liu M, Liu Z, Fan L, Liu J, Jin X, Zhou T.
doi.org
September 17, 2026 at 9:07 PM
Accurate imaging of m6A on specific mRNA with proximity ligation-triggered RCA-FISH (PLTRF-m6A)

Chemical communications (Cambridge, England) · Cao et al.
doi.org/10.1039/d6cc04660f
#RNAsky #RNAmods
Accurate imaging of m6A on specific mRNA with proximity ligation-triggered RCA-FISH (PLTRF-m6A)
We demonstrate the efficacy of PLTRF-m6A on different breast cell lines.
doi.org
September 17, 2026 at 9:06 PM
FTO-mediated GPX4 m6A modification in ferroptosis-induced DNA damage and inflammatory response during acute lung injury

Journal of bioenergetics and biomembranes · Liu et al.
doi.org/10.1007/s10863-026-10133-x
#RNAsky #RNAmods
FTO-mediated GPX4 m6A modification in ferroptosis-induced DNA damage and inflammatory response during acute lung injury
Journal of bioenergetics and biomembranes · Liu X, Gu Y, Yuan F.
doi.org
September 17, 2026 at 9:06 PM
Allosteric modulation of YTHDFs by ellagic acid suppresses triple-negative breast cancer via non-canonical activation of the HIF-1α pathway

Cell reports. Medicine · Zhou et al.
doi.org/10.1016/j.xcrm.2026.103045
#RNAsky #RNAmods
Allosteric modulation of YTHDFs by ellagic acid suppresses triple-negative breast cancer via non-canonical activation of the HIF-1α pathway
We identify ellagic acid (EA) as a compound that binds to YTHDF proteins and disrupts their interaction with N6-methyladenosine (m6A)-modified RNAs.
doi.org
September 17, 2026 at 9:06 PM
Targeting IGF2BP3-driven CSF1/CSF1R signaling disrupts the positive feedback loop between tumor cells and macrophages and inhibits HCC progression

Life sciences · Ji et al.
doi.org/10.1016/j.lfs.2026.124681
#RNAsky #RNAmods
Targeting IGF2BP3-driven CSF1/CSF1R signaling disrupts the positive feedback loop between tumor cells and macrophages and inhibits HCC progression
Life sciences · Ji X, Zhang L, Zhu X, He J, Ju Y, Jin C, Ma W, Kong X, Guo H, Yu D, Zhao K.
doi.org
September 17, 2026 at 1:20 PM
METTL7B attenuates pathological cardiac hypertrophy via m6A-associated regulation of HK3

Molecular and cellular biochemistry · Bao et al.
doi.org/10.1007/s11010-026-05737-1
#RNAsky #RNAmods
METTL7B attenuates pathological cardiac hypertrophy via m6A-associated regulation of HK3
In this study, we investigated the role of METTL7B and its association with m6A-related regulation of HK3 in pathological cardiac hypertrophy.
doi.org
September 17, 2026 at 1:20 PM
Structure-guided identification and experimental validation of NAT10-targeting small molecules in colorectal cancer cells

Journal of computer-aided molecular design · Xu et al.
doi.org/10.1007/s10822-026-00890-7
#RNAsky #RNAmods
Structure-guided identification and experimental validation of NAT10-targeting small molecules in colorectal cancer cells
Journal of computer-aided molecular design · Xu C, Zhao S, Xu B, Xu J, Wu Y, Zhang D, Wu B, Zhou Q.
doi.org
September 17, 2026 at 1:20 PM