Do you want easy access to annotated transcriptome data in animals? Where and when genes are expressed? Are you trying to analyse together single-cell datasets of different protocols and species? Come to @fbastian #smbe2026 talk presenting @bgeedb in S04 Mining the Archive at 16:35!
June 29, 2026 at 11:00 AM
I am the 1st woman for #Switzerland🇨🇭 to develop the R package in #Bioconductor, aka software development during my doctorate. shorturl.at/e0PVw (GitHub link); shorturl.at/BDLPx (Bioconductor link) #1stwomanforswitzerland #missdrkomljenovic #switzerland 🇨🇭
GitHub - wirawara/BgeeDB: an R package for retrieval of curated expression datasets and for gene list expression localization enrichment tests, Komljenovic et al. f1000Research
an R package for retrieval of curated expression datasets and for gene list expression localization enrichment tests, Komljenovic et al. f1000Research - GitHub - wirawara/BgeeDB: an R package for ...
shorturl.at
September 18, 2025 at 3:31 PM
I am the 1st woman for #Switzerland🇨🇭 to develop the R package in #Bioconductor, aka software development during my doctorate. shorturl.at/e0PVw (GitHub link); shorturl.at/BDLPx (Bioconductor link) #1stwomanforswitzerland #missdrkomljenovic #switzerland 🇨🇭
Our website is back online, although we are still working on restoring full functionality to the BgeeDB R package. Thank you for your patience. We've had to add filtering of bots, we apologize for the bother of proving you're human.
June 11, 2026 at 6:55 PM
Our website is back online, although we are still working on restoring full functionality to the BgeeDB R package. Thank you for your patience. We've had to add filtering of bots, we apologize for the bother of proving you're human.
I have to take this moment to draw your attention to the new revamped website of the #Bgee database. My R #BgeeDB package (shorturl.at/9mOSr) is part of this, Julien and I had collaboration with #Bgee team. #bgee #bgeedbpckg #bioconductor #sibdatabase
November 24, 2024 at 9:19 AM
I have to take this moment to draw your attention to the new revamped website of the #Bgee database. My R #BgeeDB package (shorturl.at/9mOSr) is part of this, Julien and I had collaboration with #Bgee team. #bgee #bgeedbpckg #bioconductor #sibdatabase
And soooo… #coffeetime #andreatech #misskomljenovic #missdrkomljenovic #software #softwaredevelopment #bgeedb #mysoftwaretospace #esa #cern #spacetech #bioinformatics #biomedicine #raffaello #coffee #balcony #vienna #austria🇦🇹
July 18, 2025 at 8:01 AM
Just for the record, my first publication is in 2013 by starting my bioinformatics PhD in Zurich in 2012, and I am a 1st woman for Switzerland🇨🇭 who developed the software package for Bioconductor! You are very welcome to cite us, go ahead. shorturl.at/NUc85 #softwaredevelopment #bioconductor
BgeeDB
A package for the annotation and gene expression data download from Bgee database, and TopAnat analysis: GO-like enrichment of anatomical terms, mapped to genes by expression patterns.
shorturl.at
February 7, 2025 at 9:56 AM
Just for the record, my first publication is in 2013 by starting my bioinformatics PhD in Zurich in 2012, and I am a 1st woman for Switzerland🇨🇭 who developed the software package for Bioconductor! You are very welcome to cite us, go ahead. shorturl.at/NUc85 #softwaredevelopment #bioconductor
Very nice preprint on the importance of #FAIR data resources in the life sciences, for AI and generally for science, by a great @SIB team led by @dessimoz. With @bgeedb inside ;)
https://zenodo.org/records/15724104
https://zenodo.org/records/15724104
The missing link in FAIR data policy: data resources
zenodo.org
July 4, 2025 at 10:54 AM
Very nice preprint on the importance of #FAIR data resources in the life sciences, for AI and generally for science, by a great @SIB team led by @dessimoz. With @bgeedb inside ;)
https://zenodo.org/records/15724104
https://zenodo.org/records/15724104
Just for the record, my first publication is in 2013 by starting my bioinformatics PhD in Zurich in 2012, and I am a 1st woman for Switzerland🇨🇭 who developed the software package for Bioconductor! You are very welcome to cite us, go ahead. shorturl.at/NUc85 #softwaredevelopment #bioconductor
BgeeDB
A package for the annotation and gene expression data download from Bgee database, and TopAnat analysis: GO-like enrichment of anatomical terms, mapped to genes by expression patterns.
shorturl.at
February 9, 2025 at 5:08 AM
Just for the record, my first publication is in 2013 by starting my bioinformatics PhD in Zurich in 2012, and I am a 1st woman for Switzerland🇨🇭 who developed the software package for Bioconductor! You are very welcome to cite us, go ahead. shorturl.at/NUc85 #softwaredevelopment #bioconductor
There are still some places in our course, with focus on genomes of non-model species or on managing many genomes, especially of eukaryotes. Apply before end of June!
https://ecoevo.social/@marcrr/114624647997226145
https://ecoevo.social/@marcrr/114624647997226145
Marc Robinson-Rechavi (@marcrr@ecoevo.social)
Registration is open for our @SIB@mstdn.science course Biodiversity bioinformatics: from large-scale phylogenomics to gene families and functions! Orthologs, paralogs, non model animal genomes, comparison of gene expression and of function, and more! With OMA, BUSCO, @bgeedb@genomic.social and other bioinformatics resources inside. Training with @dessimoz@mstdn.science @rmwaterhouse and our teams https://www.sib.swiss/training/course/20250825_COMGE
ecoevo.social
June 25, 2025 at 1:16 PM
There are still some places in our course, with focus on genomes of non-model species or on managing many genomes, especially of eukaryotes. Apply before end of June!
https://ecoevo.social/@marcrr/114624647997226145
https://ecoevo.social/@marcrr/114624647997226145
The software was developed during my doctorate and it can be used not only in medicine, but also in space medicine.
@ukspaceagency.bsky.social
Link on my software 📦 written in R programming language: bioconductor.org/packages/rel... #bgeedb #link #missdrkomljenovicforspace #softwareforspace
@ukspaceagency.bsky.social
Link on my software 📦 written in R programming language: bioconductor.org/packages/rel... #bgeedb #link #missdrkomljenovicforspace #softwareforspace
BgeeDB
A package for the annotation and gene expression data download from Bgee database, and TopAnat analysis: GO-like enrichment of anatomical terms, mapped to genes by expression patterns.
bioconductor.org
November 29, 2025 at 10:08 PM
The software was developed during my doctorate and it can be used not only in medicine, but also in space medicine.
@ukspaceagency.bsky.social
Link on my software 📦 written in R programming language: bioconductor.org/packages/rel... #bgeedb #link #missdrkomljenovicforspace #softwareforspace
@ukspaceagency.bsky.social
Link on my software 📦 written in R programming language: bioconductor.org/packages/rel... #bgeedb #link #missdrkomljenovicforspace #softwareforspace
Floating forever in zero gravity
Come together in intergalactic unity 🚀
This Christmas, I am sending my software, #BgeeDB, to UK Space Agency in United Kingdom. This software checks the genes and the life stages of the organisms, and with this also the possible life in space.
Come together in intergalactic unity 🚀
This Christmas, I am sending my software, #BgeeDB, to UK Space Agency in United Kingdom. This software checks the genes and the life stages of the organisms, and with this also the possible life in space.
November 29, 2025 at 10:07 PM
Floating forever in zero gravity
Come together in intergalactic unity 🚀
This Christmas, I am sending my software, #BgeeDB, to UK Space Agency in United Kingdom. This software checks the genes and the life stages of the organisms, and with this also the possible life in space.
Come together in intergalactic unity 🚀
This Christmas, I am sending my software, #BgeeDB, to UK Space Agency in United Kingdom. This software checks the genes and the life stages of the organisms, and with this also the possible life in space.
Link on my software package written in R programming language: www.bioconductor.org/packages/rel... #bgeedb #link #software 🪐🚀
BgeeDB
A package for the annotation and gene expression data download from Bgee database, and TopAnat analysis: GO-like enrichment of anatomical terms, mapped to genes by expression patterns.
www.bioconductor.org
October 6, 2025 at 7:46 AM
Link on my software package written in R programming language: www.bioconductor.org/packages/rel... #bgeedb #link #software 🪐🚀
🇺🇸BgeeDB package developed by Miss Dr. Komljenovic can be used in @NASA for space medicine and detecting forms of life in space checking their genes and life stages! #missdrkomljenovic #bgeedb #softwareforspace #missdrkomljenovicforspace #barbietech #andreatech #usa #nasa 🌕🚀🪐🛰️
October 6, 2025 at 7:45 AM
🇺🇸BgeeDB package developed by Miss Dr. Komljenovic can be used in @NASA for space medicine and detecting forms of life in space checking their genes and life stages! #missdrkomljenovic #bgeedb #softwareforspace #missdrkomljenovicforspace #barbietech #andreatech #usa #nasa 🌕🚀🪐🛰️
🇪🇸 El Dr. Komljenovic desarrolló el software BgeeDB, que puede utilizarse en medicina espacial, y lo envió a la ESA y al CERN!
#bgeedbsoftware #mebarbie #andreatech #barbietech #vienna #austria 🇦🇹
#bgeedbsoftware #mebarbie #andreatech #barbietech #vienna #austria 🇦🇹
October 6, 2025 at 7:19 AM
🇪🇸 El Dr. Komljenovic desarrolló el software BgeeDB, que puede utilizarse en medicina espacial, y lo envió a la ESA y al CERN!
#bgeedbsoftware #mebarbie #andreatech #barbietech #vienna #austria 🇦🇹
#bgeedbsoftware #mebarbie #andreatech #barbietech #vienna #austria 🇦🇹
🇦🇹🇨🇭 Frau Dr. Komljenovic hat BgeeDB-Software entwickelt und diese software kann für die Weltraummedizin mann nützen und hat an die ESA und das CERN gesendet!
🇫🇷 Le logiciel BgeeDB développé par Mlle Dr. Komljenovic pour la médecine spatiale est envoyé à l'ESA et au CERN!
🇫🇷 Le logiciel BgeeDB développé par Mlle Dr. Komljenovic pour la médecine spatiale est envoyé à l'ESA et au CERN!
October 6, 2025 at 7:18 AM
🇦🇹🇨🇭 Frau Dr. Komljenovic hat BgeeDB-Software entwickelt und diese software kann für die Weltraummedizin mann nützen und hat an die ESA und das CERN gesendet!
🇫🇷 Le logiciel BgeeDB développé par Mlle Dr. Komljenovic pour la médecine spatiale est envoyé à l'ESA et au CERN!
🇫🇷 Le logiciel BgeeDB développé par Mlle Dr. Komljenovic pour la médecine spatiale est envoyé à l'ESA et au CERN!
Avec la musique!😊🎼🎶🎧 #aveclamusique @cern.bsky.social @esa.int #space #bgeedb #softwareforspace #summer2025 #andreatech #barbietech #misskomljenovicforspace #vienna #austria🇦🇹
September 21, 2025 at 11:13 AM
BgeeDB software usage in Space Tech by me! 🚀🚀🚀In Space Genomics and Space Medicine! 🩺🩻🧬Link: lnkd.in/dcfXWR4d #missdrkomljenovic #softwareforspace #loveesa #lovecern #bgeedb #space #biomedicine #bioinformatics #spacemedicine #spacegenomics #cern #esa #spacetech
July 15, 2025 at 7:14 PM
BgeeDB software usage in Space Tech by me! 🚀🚀🚀In Space Genomics and Space Medicine! 🩺🩻🧬Link: lnkd.in/dcfXWR4d #missdrkomljenovic #softwareforspace #loveesa #lovecern #bgeedb #space #biomedicine #bioinformatics #spacemedicine #spacegenomics #cern #esa #spacetech
Love ESA European Space Agency - @esa.int !!! Of course, you can use the R package in @cern.bsky.social as well. :) #bgeedb #bioinformatics #biomedicine #bgeedbbymisskomljenovic #space #spacetech #loveesa #lovecern #medicine
July 15, 2025 at 6:08 PM
Love ESA European Space Agency - @esa.int !!! Of course, you can use the R package in @cern.bsky.social as well. :) #bgeedb #bioinformatics #biomedicine #bgeedbbymisskomljenovic #space #spacetech #loveesa #lovecern #medicine
My R software package - BgeeDB (lnkd.in/dcfXWR4d) that is meant to annotate the genes and anatomical structures from sequencing technologies can be used in ***🩺🩻 SPACE MEDICINE 🩺🩻***🚀🚀🚀👽🛸#loveit #rpackage #softwareforspace #misskomljenovic #spacemedicine
July 15, 2025 at 6:07 PM
My R software package - BgeeDB (lnkd.in/dcfXWR4d) that is meant to annotate the genes and anatomical structures from sequencing technologies can be used in ***🩺🩻 SPACE MEDICINE 🩺🩻***🚀🚀🚀👽🛸#loveit #rpackage #softwareforspace #misskomljenovic #spacemedicine
For those interested in @esa, there is a “Space in the city” festival at Karlsplatz in Vienna, check out the program! My R software package BgeeDB will be hopefully used in space. The R package is related to gene annotations and lifestages. #misskomljenovicforspace #rpackage #bioinformatics
June 23, 2025 at 9:01 PM
For those interested in @esa, there is a “Space in the city” festival at Karlsplatz in Vienna, check out the program! My R software package BgeeDB will be hopefully used in space. The R package is related to gene annotations and lifestages. #misskomljenovicforspace #rpackage #bioinformatics
Let me know about my BgeeDB R package travel to space, I need to know. 🪐🚀🚀🚀🚀 #misskomljenovicforspace #bgeedb #rpackage #softwaredevelopment #transcriptomics #spacegenomics #space #galaxyvibes
May 20, 2025 at 6:28 PM
Let me know about my BgeeDB R package travel to space, I need to know. 🪐🚀🚀🚀🚀 #misskomljenovicforspace #bgeedb #rpackage #softwaredevelopment #transcriptomics #spacegenomics #space #galaxyvibes