#Epitope
I really think the Halloween/nyc marathon/Election Day stretch is the epitope of fall.
November 1, 2026 at 2:32 PM
FedEpitope: Parameter-Efficient Federated Protein Language Models for Linear B-Cell Epitope Prediction https://www.biorxiv.org/content/10.64898/2026.10.31.763304v1
November 3, 2026 at 10:48 AM
FedEpitope: Parameter-Efficient Federated Protein Language Models for Linear B-Cell Epitope Prediction https://www.biorxiv.org/content/10.64898/2026.10.31.763304v1
November 3, 2026 at 10:48 AM
Like come on. I hate these games sometimes, so many nonsense words count but not epitope???
November 2, 2026 at 1:32 AM
EpiRank: partner-agnostic surface-patch retrieval for epitope prediction of protein binding interfaces https://www.biorxiv.org/content/10.64898/2026.10.26.762091v1
November 1, 2026 at 2:47 AM
EpiRank: partner-agnostic surface-patch retrieval for epitope prediction of protein binding interfaces https://www.biorxiv.org/content/10.64898/2026.10.26.762091v1
November 1, 2026 at 2:47 AM
Antibody 3CF5 neutralizes historical and emerging H5Nx influenza viruses by targeting a conserved non-receptor-binding hemagglutinin epitope pubmed.ncbi.nlm.nih.gov/42955944/ #cryoem
October 30, 2026 at 7:26 PM
Antibody 3CF5 neutralizes historical and emerging H5Nx influenza viruses by targeting a conserved non-receptor-binding hemagglutinin epitope pubmed.ncbi.nlm.nih.gov/42955944/ #cryoem
October 30, 2026 at 7:26 PM
A preprint using: Anti-HA.11 Epitope T (RRID:AB_2565335) from #BioLegend was published.

SciScore made a table with this resource, see “Automated Services” module (download as csv, xml or #jats) #OpenScience #reproducibility
www.biorxiv.org
November 1, 2026 at 1:00 PM
RRIDs were included in this in GigaScience paper. Thanks for making your methods matter! #accelerateopenscience #reproducibility #OpenResearch
Epitope Generation Gateway (EGG): A biological context-dependent approach to cancer vaccine development
Read the full paper: Epitope Generation Gateway (EGG): A biological context-dependent approach to cancer vaccine development
doi.org
October 30, 2026 at 7:08 AM
TERP pairs a random forest classifier with BLOSUM50 features of CDR3β and peptide sequences to predict TCR–epitope binding.
October 30, 2026 at 10:03 AM
For TCR-pMHC specificity, the evaluation hinges on how negatives are built: shuffled TCR-peptide pairs are much easier than hard negatives from similar epitopes. Splitting by epitope and by TCR clonotype, not only by pair, shows whether performance holds on unseen peptides.
November 1, 2026 at 8:05 PM
Longitudinal Genotype Replacement, Recombination and Neutralizing Epitope Variations in Porcine Epidemic Diarrhea Virus at a Commercial Pig Farm in Guangxi, China https://pubmed.ncbi.nlm.nih.gov/42939191/
October 29, 2026 at 5:38 PM
Revolutionizing HSPC transplant: bypass genotoxic side effects with KIT-targeted monoclonal antibodies. Discoveries promise safer therapies with greater efficacy. PMID:42420446, Nature 2026, @Nature https://doi.org/10.1038/s41586-026-10737-8 #Medsky #Pharmsky #RNA #ASHG #ESHG 🧪
Non-genotoxic transplantation and in vivo selection through epitope editing | Nature
The short-term and long-term effects of genotoxic pre-transplant conditioning remain barriers to the broader application of haematopoietic stem/progenitor cell (HSPC) transplantation and gene therapies1–4. Although monoclonal antibodies targeting KIT have been proposed as alternatives to chemotherapy or radiotherapy5–7, their pharmacokinetics hinder clinical applications owing to the risk of depleting transplanted HSPCs. Here, to address this issue, we identified amino acid changes in the extracellular domain of KIT that disrupt the binding of two therapeutic monoclonal antibodies8,9, which impair stem cell factor (SCF)-mediated signalling without affecting KIT expression or functionality. We exploited adenine base editing10 or prime editing11 to efficiently introduce these mutations in HSPCs and combined them with the disruption of the BCL11A erythroid enhancer to promote expression of fetal haemoglobin (HbF)12,13, a therapeutic approach for several haemoglobinopathies. This strategy
doi.org
November 3, 2026 at 10:00 PM
Open Access UCL Research: HLA-DPB1 T Cell Epitope Mismatch Vector Differentially Affects Hematopoietic Cell Transplantation Outcomes in 10/10 and ≤9/10 HLA- Matched Patients in the United Kingdom
discovery.ucl.ac.uk/id/eprint/10...
HLA-DPB1 T Cell Epitope Mismatch Vector Differentially Affects Hematopoietic Cell Transplantation Outcomes in 10/10 and ≤9/10 HLA- Matched Patients in the United Kingdom - UCL Dis...
UCL Discovery is UCL's open access repository, showcasing and providing access to UCL research outputs from all UCL disciplines.
discovery.ucl.ac.uk
October 30, 2026 at 1:36 PM
Multi-epitope vaccine eliciting robust immune responses against diverse Crimean-Congo hemorrhagic fever virus strains targeting the glycoprotein and RNA polymerase: An immunoinformatics-driven approach
Multi-epitope vaccine eliciting robust immune responses against diverse Crimean-Congo hemorrhagic fever virus strains targeting the glycoprotein and RNA polymerase: An immunoinformatics-driven approach
Crimean-Congo hemorrhagic fever is a severe, life-threatening, tick-borne disease with reported case-fatality rate of up to 40%. Recognized by the World Health Organization as a priority because of its epidemic potential in more than 30 countries, it lacks effective treatment, making the urgent development of a vaccine crucial. In this study, we employed a state-of-the-art immunoinformatics-driven approach to design a multi-epitope subunit vaccine targeting diverse Crimean-Congo hemorrhagic fever virus strains.
dlvr.it
October 29, 2026 at 7:33 PM
Longitudinal Genotype Replacement, Recombination and Neutralizing Epitope Variations in Porcine Epidemic Diarrhea Virus at a Commercial Pig Farm in Guangxi, China https://pubmed.ncbi.nlm.nih.gov/42939191/
October 28, 2026 at 4:25 PM
Epitope-diverse #autoantibodies induce #neutrophil-epithelial niches driving kidney injury in ANCA-associated #glomerulonephritis. New study from Masayuki Nishide, Atsushi Kumanogoh (University of Osaka) and colleagues:
rupress.org/jem/article/...

#InnateImmunity #inflammation #Autoimmunity
October 26, 2026 at 1:31 PM
Effector-primed TCF1+ CD8+ T cells elicited by a networked epitope vaccine stratify protection against SHIV acquisition https://www.biorxiv.org/content/10.64898/2026.10.20.760588v1
October 26, 2026 at 3:15 AM
A loop-mimetic SOD1 antigen elicits antibodies to a mutant-associated conformational epitope and ameliorates disease in SOD1G93A mice #NeuroDegeneration 🧪🧠
https://link.springer.com/10.1186/s40478-026-02457-x
October 27, 2026 at 8:03 AM
Kim, Myaskovsky, Donosa, Chan, Rogers, Hassidim, Matias, Pawlosky: Agent-guided epitope excision enables economical de novo binder design https://arxiv.org/abs/2610.33195 https://arxiv.org/pdf/2610.33195 https://arxiv.org/html/2610.33195
October 27, 2026 at 6:59 AM
Pancreatic ductal adenocarcinoma (PDAC) remains one of the deadliest malignancies.

In @lancetgastrohep.bsky.social, a Review evaluates the clinical development of therapeutic cancer vaccines in PDAC: spkl.io/633267kQT2
October 27, 2026 at 4:05 PM
Effector-primed TCF1+ CD8+ T cells elicited by a networked epitope vaccine stratify protection against SHIV acquisition https://www.biorxiv.org/content/10.64898/2026.10.20.760588v1
October 26, 2026 at 3:15 AM
Effector-primed TCF1+ CD8+ T cells elicited by a networked epitope vaccine stratify protection against SHIV acquisition #SingleCell 🧪🧬🖥️
https://www.biorxiv.org/content/10.64898/2026.10.20.760588v1
October 26, 2026 at 5:00 AM