#HDAC
Very happy to see this story out in #JACS_Au!

Discovery of De Novo Macrocycle Inhibitors of Histone Deacetylase 11
pubs.acs.org/doi/10.1021/...

#ChemBio #chemsky #HDAC
Discovery of De Novo Macrocycle Inhibitors of Histone Deacetylase 11
Histone deacetylase (HDAC) enzymes are epigenetic regulators that affect diverse protein function by removing acyl groups from lysine side chains throughout the proteome. The most recently discovered ...
pubs.acs.org
February 19, 2025 at 11:54 AM
ahead of Sarepta's superior drug); elevidys will be FDA approved on June 21st. To remind you, givinostat is an HDAC inhibitor which will tell my muscles cells to wake up and fix themselves while Elevidys is a mini-gene therapy that will fix my genetic code (the cure itself)....see reply
June 12, 2024 at 11:52 PM
Our paper on the structure of the complete Rpd3S-nucleosome complex is now out in Nat Comm: rdcu.be/ds6k1 . Congrats to @jonmarkert.bsky.social
and co-corresponding author Seychelle Vos! This is the second HDAC-nucleosome structure from Jon this year. Amazing!
December 8, 2023 at 12:32 PM
#ASH24 #leusm Jacoby: failure to clear leuk assoc mutations (LAMS) after induction assoc with decre RFS. This study assigned this with clearance (
December 7, 2024 at 10:33 PM
NAMPT/HDAC dual-protein degradation mediated by PROTACs using a three-component intracellular self-assembly strategy

doi.org/10.1016/j.cc...
March 9, 2026 at 12:01 PM
Our work on macrocyclic HDAC11 inhibitors is now out in JACS Au! pubs.acs.org/doi/10.1021/...
#openaccess #chemsky
February 16, 2025 at 8:26 PM
The Pflum Lab’s latest publication in #ACSChemicalBiology reviews numerous scaffolding roles of #HDAC7 along with insights into newly identified acetylation-mediated reversible scaffolding reader function. #wsuchemistry #chemistryindetroit #chembio #ChemSky

doi.org/10.1021/acsc...
Scaffolding Activities of Pseudodeacetylase HDAC7
Histone deacetylase (HDAC) enzymes remove acetyl groups from acetyllysine-containing proteins, including nucleosomal histones to control gene expression. Beyond fundamental cell biology, HDAC activity is linked to various cancers, with many HDAC inhibitors developed as anticancer therapeutics. Among the 11 metal-dependent HDAC proteins, the four class IIa isoforms (HDAC4, 5, 7, and 9) are “pseudodeacetylases” without measurable enzymatic activity due to mutation of a catalytic tyrosine. Deacetylase-related activities of class IIa HDAC proteins are attributed to scaffolding functions, where recruitment of an active HDAC isoform leads to bound substrate deacetylation. Scaffolding of class IIa proteins beyond simple recruitment of an active HDAC is only starting to emerge. This review explores the various scaffolding roles of HDAC7, including recently reported acetylation-mediated reversible scaffolding, which is a form of acetyllysine-binding reader function. Studying the functional roles of HDAC7 will provide molecular insight into normal and pathological conditions, which could facilitate drug design.
doi.org
February 12, 2025 at 4:39 PM
So now we’ve finally found the way to use all those HDAC inhibitors we have lying around (I’m kidding … my god, I’m kidding!) #epigenetics
November 19, 2024 at 8:51 AM
Understanding the roles of salt-inducible kinases in cardiometabolic disease

Isoform-specific & redundant roles of SIK1/2/3

Interplay with cAMP-PKA-CRTC/CREB; Ca2+-CAMKI-PP2A-Na+/K+ ATPase; Class IIa HDAC-MEF2; TGFβ-SMAD7 cascades

#FrontPhysiol 2024
www.frontiersin.org/journals/phy...
February 17, 2025 at 8:15 PM
NAMPT/HDAC dual-protein degradation mediated by PROTACs using a three-component intracellular self-assembly strategy
NAMPT/HDAC dual-protein degradation mediated by PROTACs using a three-component intracellular self-assembly strategy

doi.org/10.1016/j.cc...
March 9, 2026 at 12:02 PM
Synthesis of a HDAC inhibitor-nanogold probe for cryo-EM visualization in class I HDAC co-repressor complexes pubmed.ncbi.nlm.nih.gov/41918712/ #cryoem
April 3, 2026 at 1:15 AM
NAMPT/HDAC dual-protein degradation mediated by PROTACs using a three-component intracellular self-assembly strategy
NAMPT/HDAC dual-protein degradation mediated by PROTACs using a three-component intracellular self-assembly strategy

doi.org/10.1016/j.cc...
March 9, 2026 at 12:01 PM
Check out the final version of this paper. Now out in #JACS_Au @pubs.acs.org

pubs.acs.org/doi/10.1021/...
February 16, 2025 at 5:14 PM
New paper!
Our chemoproteomic survey of phenylhydroxamic acids identifies the first drug-like inhibitors for nucleotide-binding protein HINT1 and nucleoside kinases NME1-4. On top, we found probes for the HDAC inhibitor off-target MBLAC2. Check out the open-access article! tinyurl.com/yh92vh6b
sev on X: "Paper alert! We report the first inhibitors for nucleoside kinases NME1-4 and for the nucleotide-binding protein HINT1. On top, we provide probes for MBLAC2, an off-target of every second (!) hydroxamic acid-based HDAC inhibitor! https://t.co/uuRCO78xFz 👇🧵" / X
Paper alert! We report the first inhibitors for nucleoside kinases NME1-4 and for the nucleotide-binding protein HINT1. On top, we provide probes for MBLAC2, an off-target of every second (!) hydroxamic acid-based HDAC inhibitor! https://t.co/uuRCO78xFz 👇🧵
x.com
May 9, 2025 at 11:33 AM
Treatment with a selective histone deacetylase (HDAC) 1 and 2 inhibitor in aged mice rejuvenates multiple organ systems https://www.biorxiv.org/content/10.1101/2023.08.29.555280v1
Treatment with a selective histone deacetylase (HDAC) 1 and 2 inhibitor in aged mice rejuvenates multiple organ systems https://www.biorxiv.org/content/10.1101/2023.08.29.555280v1
Aging increases the risk of developing age-related diseases, which comes at great societal healthcar
www.biorxiv.org
August 31, 2023 at 7:55 PM
Thrilled to finally write up a little thread on our recent paper with @gburslem.bsky.social describing how HDACs reversibility contributes to protein lactylation!

www.jbc.org/article/S002...
August 20, 2025 at 7:28 PM
DNMT and HDAC inhibition induces immunogenic neoantigens from human endogenous retroviral element-derived transcripts
DNMT and HDAC inhibition induces immunogenic neoantigens from human endogenous retroviral element-de...
Epigenetic therapies are known to synergize with immunotherapies through the de-repression of endogenous retroviral element (ERV)-encoded promoters. Here the authors identify treatment-induced neoanti...
www.nature.com
October 24, 2023 at 7:07 AM
Epigenetics Update - A Lactate–H4K12la–HDAC1 epigenetic axis governs microglial state transitions during experimental autoimmune encephalomyelitis in female mice u.epigenome.us/jLW1B75s

#Epigenetics #Chromatin #MultipleSclerosis #H4K12la #HDAC #Microglia
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Gain hi-res insight; epigenometech.com
September 11, 2026 at 6:40 AM
#ASH24 #leusm Jacoby: Those who cleared LAMs and got HDAC wo HCT had better RFS/OS than historical control (though not great RFS, but ability to salvage appears high). Those who did not clear LAMs had far superior RFS/OS if they went to alloHCT.
December 7, 2024 at 10:40 PM
🚨 PUBLICATION ALERT 🚨

From the Pflum Lab, “HDAC11 Deacetylates BRAF to Regulate Kinase Activity and Cell Proliferation” in ACS Chemical Biology. #wsuchemistry #chembio #ChemSky #HDAC

doi.org/10.1021/acsc...
HDAC11 Deacetylates BRAF to Regulate Kinase Activity and Cell Proliferation
Histone acetylation, governed by histone deacetylase (HDAC) enzymes, plays a pivotal role in cell biology. Elevated HDAC expression is linked to a poor prognosis in various diseases, including cancer, making HDAC inhibitors clinically valuable. Among the 11 metal-dependent HDAC isoforms, the exceptional ability of HDAC11 to regulate both the deacetylation and defattyacylation of proteins suggests an expansive role in cellular processes. However, since HDAC11 is one of the least studied HDAC isoforms, the known roles for HDAC11 in cell biology are limited. In this study, proteomics-based mutant trapping was performed to identify nonhistone substrates of HDAC11 and link HDAC11 activity to specific cellular events. Proteomics revealed 64 putative substrates, with follow-up studies documenting that HDAC11 deacetylates the BRAF kinase on K680 to suppress kinase activity and cell proliferation. Given the established role of BRAF in cancer, HDAC11-mediated deacetylation likely influences signaling pathways in tumor progression, underscoring the diverse regulatory role of HDAC11 in cellular events.
doi.org
November 25, 2025 at 3:08 PM
🧪 Dr. Munro Passmore (Uni Warwick)
#HDAC-Hemmer
„Potenzial, die Erstellung von Bibliotheken mit Arzneimittelkandidaten deutlich zu beschleunigen und es v.a. ermöglichen, die vielversprechendsten in großem Maßstab zu einem vertretbaren Preis herzustellen“
www.fr.de/panorama/for...
Durchbruch in der Krebs-Forschung: Wissenschaftler knacken entscheidenden Code
Hoffnung für Patienten: Forscher entdecken einen neuen Mechanismus, der die Entwicklung neuer Krebsmedikamente beschleunigen könnte.
www.fr.de
July 3, 2026 at 12:38 PM
Paper alert!
We report the first inhibitors for nucleoside kinases NME1-4 and for the nucleotide-binding protein HINT1.
On top, we provide probes for MBLAC2, an off-target of every second (!) hydroxamic acid-based HDAC inhibitor!
tinyurl.com/yh92vh6b
👇🧵
tinyurl.com
May 9, 2025 at 12:00 PM
HDAC inhibitörleri olarak bilinen kanser ilaçlarının geleneksel çalışma mekanizmasını sorgulamaktadır. Onlarca yıldır bu ilaçların, genlerin açılıp kapanmasını değiştirerek kanser gelişimini tetikleyen HDAC enzimlerini bloke ettiği düşünülüyordu.
June 8, 2026 at 3:55 PM
Interesting news related to data centers today that Avnos hybrid DAC that uses waste heat to pull CO2 out of the air and also produces clean water is now building a factory to produce their first model.
carbonherald.com/exclusive-av...
Exclusive: Avnos Introduces the Avnos HDAC™ Module, Its First Factory-Built Product Line
Today, Avnos is introducing the Avnos HDAC™ Module, the company’s first standardized, factory-built product family.
carbonherald.com
September 17, 2026 at 4:41 PM
Interesting! Reminds me of Bing Zhu's work showing that dense nucleosomes are better PRC2 substrates.
Also curious if CHD4 remodeling activity would help HDAC in NuRD.
August 5, 2026 at 3:26 AM