#NetworkBiology
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larsjuhljensen.bsky.social
A video on the STRING version 12.5 update: cleaner functional association network thanks to improved text mining and a new directed regulatory network!
youtu.be/tTf_aIE8Wxw
#bioinformatics #networkbiology #systemsbiology #textmining
STRING version 12.5: A brief introduction to the quantitative and qualitative changes
YouTube video by Lars Juhl Jensen
youtu.be
September 15, 2026 at 11:32 AM
intact-ebi.bsky.social
👏 A big thanks to Élodie Monsellier @emonsellier.bsky.social and the team for their collaboration in bringing this integration to IntAct!

#IntActEBI #PPI #NetworkBiology
March 2, 2026 at 11:30 AM
netbio.bsky.social
🎤 Next talk at #NetBio:
@beatrizurda.bsky.social: Disentangling the genetic and non-genetic origin of disease co-occurrences

#ISMBECCB2025 #NetworkBiology
July 22, 2025 at 2:49 PM
interactome.bsky.social
Hey #networkbiology bubble and affinionados. Don't miss the CSHL Meeting: Network Biology in spring 2025. Great panel of speakers lined up by the organizers @fritzroth.bsky.social @pedrobeltrao.bsky.social, Roded Sharan, and @jsvanleeuwen.bsky.social.

meetings.cshl.edu/meetings.asp...
Network Biology
Cold Spring Harbor Laboratory Meetings & Courses -- a private, non-profit institution with research programs in cancer, neuroscience, plant biology, genomics, bioinformatics.
meetings.cshl.edu
December 5, 2024 at 9:14 PM
netbio.bsky.social
✨ @anaisbaudot.bsky.social is opening #NetBio 2025 to a full conference hall here in Liverpool. Exciting to see many network enthusiasts in one room! 👏
#ISMBECCB2025 #NetworkBiology
July 22, 2025 at 10:35 AM
netbio.bsky.social
🎤 Next talk at #NetBio is by Aritra Bose from IBM Research presenting their work on "Quantum Random Walks for Biomarker Discovery in Biomolecular Networks".

#ISMBECCB2025 #NetworkBiology
July 22, 2025 at 4:05 PM
bioinfoadv.bsky.social
ICYMI, August 2024: "Current and future directions in network biology" shares insights into advancing cellular function and disease research through #MachineLearning, multimodal data integration, and personalized medicine.

Read it here: doi.org/10.1093/bioa...

#NetworkBiology #SystemsBiology
November 21, 2024 at 5:21 PM
netbio.bsky.social
🎉 And now it is time to introduce our last and shared keynote with the Microbiome COSI:
@fionabrinkman.bsky.social is talking about "Microbiome multitudes and metadata madness" connecting the #Microbiome and #NetworkBiology communities!

#ISMBECCB2025
July 23, 2025 at 1:51 PM
netbio.bsky.social
📣Last speaker of the #NetBio morning session:
Samuele Firmani is presenting GATE (Graph Antiviral Target Explorer) to predict disease genes in viral infections with Message Passing Neural Networks"

#ISMBECCB2025 #NetworkBiology
July 23, 2025 at 11:51 AM
chiosislabmskcc.bsky.social
Dive deeper into our @cp-trendsbiochem.bsky.social cover article! Read more on @springernature.com Communities:
communities.springernature.com/posts/when-m...
#Epichaperome #PTMs #NetworkBiology #SystemsBiology #TrendsBiochem #NatureCommunities
When Modifications Rewrite Networks: How PTMs Reprogram Chaperones into Epichaperomes
communities.springernature.com
October 10, 2025 at 2:51 PM
netbio.bsky.social
✨ And it's already time for the last selected #NetBio talk! Piotr Sliwa is presenting "Multilayer Networks Identify Clinically Relevant Patient Endotypes in COVID-19 and Sepsis"

#ISMBECCB2025 #NetworkBiology
July 23, 2025 at 1:10 PM
netbio.bsky.social
📢 Next up at #NetBio:
We're excited to welcome Mayra Luisa Ruiz Tejada Segura presenting:
"Nichesphere: A Method to Identify Disease-Specific Physical Cell-Cell Interactions and Communication Networks"

#ISMBECCB2025 #NetworkBiology
July 22, 2025 at 11:15 AM
netbio.bsky.social
🧬Excited to welcome Giulia Cesaro to present #CellGOSSIP, a novel strategy to decode cell-specific intracellular signaling from noisy single-cell data using personalized network propagation.
🎯 Reveal hidden pathway dynamics and functional cell states!
#ISMBECCB2025 #NetworkBiology #NetBio
July 22, 2025 at 11:50 AM
netbio.bsky.social
✨ Kicking off at 11:20: the #NetBio track at #ISMBECCB2025 in Liverpool! Join us in Room 1B for an exciting program until tomorrow afternoon:
🔹 3 inspiring keynotes
🔹 3 proceedings papers
🔹 14 selected talks
🔹 45 posters

#NetworkBiology #ISMB2025
@iscb.bsky.social
July 22, 2025 at 8:51 AM
netbio.bsky.social
✨After a very well-attended first poster session with lots of discussions, we are now starting with the second day of #NetBio at #ISMBECCB2025!

Make sure you visit our #NetworkBiology posters in the next two days! Lots of:
- tools/resources
- methods/algorithms
- biomedical applications/use cases
July 23, 2025 at 10:30 AM
netbio.bsky.social
📢 Next up: @SaniyaKhullar presents NetREm, a powerful new method revealing how transcription factors coordinate gene regulation across cell types.
From immune cells to Alzheimer’s brains, NetREm maps regulatory networks with real-world validation.
#ISMBECCB2025 #NetworkBiology
July 22, 2025 at 11:28 AM
larsjuhljensen.bsky.social
Do you rely on chatbots for doing your research? Are you using STRING? Good news: there's a chat interface for that too!
youtu.be/Qss0jxGNlMk
#ai #bioinformatics #networkbiology #systemsbiology
Basic STRING chat tutorial: How to cheat in my STRING exercises
YouTube video by Lars Juhl Jensen
youtu.be
June 16, 2026 at 10:38 AM
sbnblab.bsky.social
Great work by the whole team, driving the future of computational biology! 🚀

#IRBBarcelona #PhDday2025 #JBI2025 #SBNB #sbnblab #Research #Leadership #ScienceCommunity #PhDLife #DrugDiscovery #StructuralBiology #NetworkBiology #AI #Bioinformatics #ComputationalBiology
October 31, 2025 at 9:23 AM
netbio.bsky.social
After lots of #NetBio discussions over coffee, we are now starting the last session for today:
Lucas Gillenwater is presenting his #ISMBECCB2025 proceeding paper "GRACKLE: An interpretable matrix factorization approach for biomedical representation learning".

doi.org/10.1093/bioi...
#NetworkBiology
July 22, 2025 at 3:45 PM
netbio.bsky.social
🎙️Next #NetBio talk: Kivilcim Ozturk uncovers how mutations in intrinsically disordered regions (IDRs) disrupt protein interactions in cancer, revealing potential cellular vulnerabilities.

#ISMBECCB2025 #NetworkBiology
July 22, 2025 at 1:47 PM
gorkalasso.bsky.social
We approach these problems by studying how viral infections work at the molecular level using:
🔹 #StructuralBioinformatics
🔹 #MachineLearning
🔹 #NetworkBiology
… and we collaborate with experimentalists worldwide 🌍 #TogetherStronger
July 17, 2025 at 2:21 PM
netbio.bsky.social
✨Johannes Kersting just presented his cool #Nextflow Pipeline for Network-Based Disease Module Identification and Drug Repurposing

nf-co.re/diseasemodul...
github.com/nf-core/dise...
#ISMBECCB2025 #NetworkBiology #NetBio
July 23, 2025 at 11:38 AM
netbio.bsky.social
⌛It's already time for our last #NetBio speaker of today:

✨🔊We are excited to welcome our 2nd keynote speaker Jan Baumbach talking about "Quantum computing for network medicine-based epistatic disease mechanism mining - Fake it till you make it?" ✨

#ISMBECCB2025 #NetworkBiology
July 22, 2025 at 4:29 PM
netbio.bsky.social
🔊 Up next at #NetBio: Sindhura Kommu presents her work on "Prediction of Gene Regulatory Connections with Joint Single-Cell Foundation Models and Graph-Based Learning."

She couldn’t join us onsite in Liverpool, but is connecting live to share her research ✨!
#ISMBECCB2025 #NetworkBiology
July 22, 2025 at 1:10 PM
chiosislabmskcc.bsky.social
🚨Publication alert! The final version of our cover feature article is OUT NOW in @cp-trendsbiochem.bsky.social

Read how we connect the #epichaperome with the #chaperone code.

#PTMs #HSP90 #PPI #neuroscience #NetworkBiology
Check out the review article here: www.sciencedirect.com/science/arti...
PTMs as molecular encoders: reprogramming chaperones into epichaperomes for network control in disease
Recent discoveries reveal that post-translational modifications (PTMs) do more than regulate protein activity – they encode conformational states that…
www.sciencedirect.com
October 14, 2025 at 4:56 PM