In small study #GeneOntology analysis revealed that both acute & long-term effects of fatigue were associated with abnormal social behavior. The findings reveal 🧠 network reconfiguration trajectories during post-viral fatigue progression that serve as functional biomarkers for tracking NC sequelae.
June 15, 2025 at 10:40 AM
In small study #GeneOntology analysis revealed that both acute & long-term effects of fatigue were associated with abnormal social behavior. The findings reveal 🧠 network reconfiguration trajectories during post-viral fatigue progression that serve as functional biomarkers for tracking NC sequelae.
Proud of latest publication on #Drosophila #enzymes at doi.org/10.1093/g3jo..., representing several years of diligent work enhancing fly enzyme annotations and display at @flybase.bsky.social and significant improvements of the #GeneOntology.
Comprehensive annotation of the enzymes of Drosophila melanogaster
Abstract. We have completed a systematic survey of Drosophila melanogaster enzymes, improving the coverage and accuracy of their functional Gene Ontology a
doi.org
January 12, 2026 at 9:07 AM
Proud of latest publication on #Drosophila #enzymes at doi.org/10.1093/g3jo..., representing several years of diligent work enhancing fly enzyme annotations and display at @flybase.bsky.social and significant improvements of the #GeneOntology.
@svalver.bsky.social et al. analyzed 15 years of Gene Ontology evolution, finding that GO changes not just incrementally, but also via major, curator-driven restructurings.
🔗 doi.org/10.1093/molbev/msaf148
#evobio #geneontology
🔗 doi.org/10.1093/molbev/msaf148
#evobio #geneontology
June 30, 2025 at 7:18 AM
@svalver.bsky.social et al. analyzed 15 years of Gene Ontology evolution, finding that GO changes not just incrementally, but also via major, curator-driven restructurings.
🔗 doi.org/10.1093/molbev/msaf148
#evobio #geneontology
🔗 doi.org/10.1093/molbev/msaf148
#evobio #geneontology
🧬 US genomics expert Paul Thomas joins SIB as Swiss-Prot co-director, with @alanbridge.bsky.social
🔍 Leader in gene function research; among the world’s most-cited scientists
📊 His arrival strengthens SIB’s role in generating trustworthy, AI-ready biological knowledge #UniProt #GeneOntology
More 👇
🔍 Leader in gene function research; among the world’s most-cited scientists
📊 His arrival strengthens SIB’s role in generating trustworthy, AI-ready biological knowledge #UniProt #GeneOntology
More 👇
US genomics pioneer Paul Thomas joins SIB as Swiss-Prot co-director
Paul Thomas joins Alan Bridge in leading SIB’s largest group, based in Geneva. As a pioneer in computational biology for genomics, principal investigator of a globally important resource on gene...
www.sib.swiss
September 15, 2025 at 11:43 AM
🧬 US genomics expert Paul Thomas joins SIB as Swiss-Prot co-director, with @alanbridge.bsky.social
🔍 Leader in gene function research; among the world’s most-cited scientists
📊 His arrival strengthens SIB’s role in generating trustworthy, AI-ready biological knowledge #UniProt #GeneOntology
More 👇
🔍 Leader in gene function research; among the world’s most-cited scientists
📊 His arrival strengthens SIB’s role in generating trustworthy, AI-ready biological knowledge #UniProt #GeneOntology
More 👇
AgriGO: A web-based tool to perform gene ontology enrichment analysis
AgriGO: A web-based tool to perform gene ontology enrichment analysis
#agrigo #geneontology #enrichmentanalysis In this video i have show how to perform gene ontology analysis using agri GO.https://www.youtube.com/playlist?list...
buff.ly
December 26, 2024 at 5:41 PM
AgriGO: A web-based tool to perform gene ontology enrichment analysis
Folks anyone know why the ShinyGO website is not working on my laptop (2 browsers) but will load on my phone? And how to fix it? #GeneOntology #Bioinformatics #Transcriptome 🌱
April 15, 2026 at 9:29 PM
Folks anyone know why the ShinyGO website is not working on my laptop (2 browsers) but will load on my phone? And how to fix it? #GeneOntology #Bioinformatics #Transcriptome 🌱
Intriguingly,🤔 a number of functional #GeneOntology categories showed divergent regulation 🧬 with #aging at the transcriptomic and epigenomic levels as a function of 🐁 animal #sex, including #phagocytosis, #metabolism and #inflammatory pathways. 5/13
June 18, 2025 at 4:00 PM
Intriguingly,🤔 a number of functional #GeneOntology categories showed divergent regulation 🧬 with #aging at the transcriptomic and epigenomic levels as a function of 🐁 animal #sex, including #phagocytosis, #metabolism and #inflammatory pathways. 5/13
From @borja-pitarch.bsky.social and colleagues in #OUP 's #DATABASE journal | A review on #GeneOntology evaluations | #Bioinformatics #Genomics #Review #OpenScience #GO 🧬 🖥️ 🧪 🔓🇪🇸
⬇️
academic.oup.com/database/art...
⬇️
academic.oup.com/database/art...
A review on Gene Ontology evaluations
Abstract. The analysis of the large and heterogeneous datasets that characterize modern biology demands systems capable of representing biological knowledg
academic.oup.com
September 26, 2025 at 1:07 PM
From @borja-pitarch.bsky.social and colleagues in #OUP 's #DATABASE journal | A review on #GeneOntology evaluations | #Bioinformatics #Genomics #Review #OpenScience #GO 🧬 🖥️ 🧪 🔓🇪🇸
⬇️
academic.oup.com/database/art...
⬇️
academic.oup.com/database/art...
Next in the Edu-Vid series is #GeneOntology'.
A catalog of genes, their functions and where they are expressed.
youtu.be/cP-GjeOzfvU
With @sciencebagels.bsky.social #SciBagels
A catalog of genes, their functions and where they are expressed.
youtu.be/cP-GjeOzfvU
With @sciencebagels.bsky.social #SciBagels
Gene Ontology
YouTube video by Science Bagels
youtu.be
May 19, 2025 at 2:26 AM
Next in the Edu-Vid series is #GeneOntology'.
A catalog of genes, their functions and where they are expressed.
youtu.be/cP-GjeOzfvU
With @sciencebagels.bsky.social #SciBagels
A catalog of genes, their functions and where they are expressed.
youtu.be/cP-GjeOzfvU
With @sciencebagels.bsky.social #SciBagels
Stordal - gene expression comparing 3 studies in Sweden & USA, compared with Geneontology
1. Peri 2011 Sweden pmc.ncbi.nlm.nih.gov/articles/PMC...
1. Peri 2011 Sweden pmc.ncbi.nlm.nih.gov/articles/PMC...
Defining the genomic signature of the parous breast
It is accepted that a woman's lifetime risk of developing breast cancer after menopause is reduced by early full term pregnancy and multiparity. This phenomenon is thought to be associated with the development and differentiation of the breast ...
pmc.ncbi.nlm.nih.gov
November 12, 2025 at 4:34 PM
Stordal - gene expression comparing 3 studies in Sweden & USA, compared with Geneontology
1. Peri 2011 Sweden pmc.ncbi.nlm.nih.gov/articles/PMC...
1. Peri 2011 Sweden pmc.ncbi.nlm.nih.gov/articles/PMC...
🌟 Project Update🧬
The most overrepresented Gene Ontology terms included
🦠 Defense response to virus (GO:0051607)
🤝 Defense response to symbiont (GO:0140546)
🛡️ Immune response (GO:0006955)
⚡ Response to biotic stimulus (GO:0009607)
💡 Innate immune response (GO:0045087)
#Bioinformatics #GeneOntology
The most overrepresented Gene Ontology terms included
🦠 Defense response to virus (GO:0051607)
🤝 Defense response to symbiont (GO:0140546)
🛡️ Immune response (GO:0006955)
⚡ Response to biotic stimulus (GO:0009607)
💡 Innate immune response (GO:0045087)
#Bioinformatics #GeneOntology
January 1, 2025 at 6:48 PM
🌟 Project Update🧬
The most overrepresented Gene Ontology terms included
🦠 Defense response to virus (GO:0051607)
🤝 Defense response to symbiont (GO:0140546)
🛡️ Immune response (GO:0006955)
⚡ Response to biotic stimulus (GO:0009607)
💡 Innate immune response (GO:0045087)
#Bioinformatics #GeneOntology
The most overrepresented Gene Ontology terms included
🦠 Defense response to virus (GO:0051607)
🤝 Defense response to symbiont (GO:0140546)
🛡️ Immune response (GO:0006955)
⚡ Response to biotic stimulus (GO:0009607)
💡 Innate immune response (GO:0045087)
#Bioinformatics #GeneOntology
☀️🌊 #Yeast26 attendees, don't miss our #SGD workshop TODAY at 3:30 PM in Merrill Hall!
Your #YeastResearch is about to hit different! 🔥 Learn the SGD tools, @alliancegenome.bsky.social & #GeneOntology shortcuts from SGD curators that actually work - no more endless database scrolling! 🧬✨
Your #YeastResearch is about to hit different! 🔥 Learn the SGD tools, @alliancegenome.bsky.social & #GeneOntology shortcuts from SGD curators that actually work - no more endless database scrolling! 🧬✨
Saved By The Bell: Like Yeast We Rise
ALT: Saved By The Bell: Like Yeast We Rise
static.klipy.com
June 15, 2026 at 8:21 PM
☀️🌊 #Yeast26 attendees, don't miss our #SGD workshop TODAY at 3:30 PM in Merrill Hall!
Your #YeastResearch is about to hit different! 🔥 Learn the SGD tools, @alliancegenome.bsky.social & #GeneOntology shortcuts from SGD curators that actually work - no more endless database scrolling! 🧬✨
Your #YeastResearch is about to hit different! 🔥 Learn the SGD tools, @alliancegenome.bsky.social & #GeneOntology shortcuts from SGD curators that actually work - no more endless database scrolling! 🧬✨
There are 220 #BiochemicalPathways in #Yeast, involving 557 different #genes - all this info has now been incorporated into #GeneOntology annotations - check it out!
www.yeastgenome.org/blog/yeast-b...
www.yeastgenome.org/blog/yeast-b...
April 9, 2025 at 4:41 PM
There are 220 #BiochemicalPathways in #Yeast, involving 557 different #genes - all this info has now been incorporated into #GeneOntology annotations - check it out!
www.yeastgenome.org/blog/yeast-b...
www.yeastgenome.org/blog/yeast-b...
Gene Ontology is being added for all NCBI RefSeq Eukaryote genomes (1.7K and growing), called by interProScan + Panther/TreeGrafter 😊 #NCBI #GeneOntology 🧬 🖥️
Gene Ontology (GO) Terms for NCBI RefSeq Eukaryotic Genomes - NCBI Insights
Are you interested in more functional information about protein-coding genes? We’ve expanded NCBI RefSeq’s Eukaryote Genome Annotation Pipeline (EGAP) to include Gene Ontology (GO) terms compute...
ncbiinsights.ncbi.nlm.nih.gov
November 16, 2023 at 4:57 AM
Gene Ontology is being added for all NCBI RefSeq Eukaryote genomes (1.7K and growing), called by interProScan + Panther/TreeGrafter 😊 #NCBI #GeneOntology 🧬 🖥️
Is DAVID, <a href="http://david.abcc.ncifcrf.gov/," class="hover:underline text-blue-600 dark:text-sky-400 no-card-link" target="_blank" rel="noopener" data-link="bsky">http://david.abcc.ncifcrf.gov/, down? #geneontology #gsea
November 17, 2024 at 2:01 PM
Is DAVID, <a href="http://david.abcc.ncifcrf.gov/," class="hover:underline text-blue-600 dark:text-sky-400 no-card-link" target="_blank" rel="noopener" data-link="bsky">http://david.abcc.ncifcrf.gov/, down? #geneontology #gsea
New in Briefings in Bioinformatics: we use the Gene Ontology @geneontology.bsky.social as a logical framework to ask whether genome-scale function annotations are biologically plausible, not only accurate protein by protein. #GeneOntology #Bioinformatics 1/6
June 30, 2026 at 6:02 PM
New in Briefings in Bioinformatics: we use the Gene Ontology @geneontology.bsky.social as a logical framework to ask whether genome-scale function annotations are biologically plausible, not only accurate protein by protein. #GeneOntology #Bioinformatics 1/6
Help us improve the GO! How can we do better? Take the #geneontology survey http://tinyurl.com/outyy5f ...and win a prize!
Gene Ontology Resource
The Gene Ontology (GO) project is a major bioinformatics ...
tinyurl.com
December 8, 2024 at 1:53 AM
Help us improve the GO! How can we do better? Take the #geneontology survey http://tinyurl.com/outyy5f ...and win a prize!
#Noctua: new #geneontology curation tool goes beyond simple annotation into biological modeling http://goo.gl/Jeinbp
Noctua (Beta) Noctua Landing Page
Noctua Annotation Review
goo.gl
December 8, 2024 at 1:48 AM
#Noctua: new #geneontology curation tool goes beyond simple annotation into biological modeling http://goo.gl/Jeinbp
Wanna code for the #GeneOntology project? We have a position open, can be based in Berkeley or LA. https://usc.wd5.myworkdayjobs.com/ExternalUSCCareers/job/Los-Angeles-CA---Health-Sciences-Campus/Programmer-Analyst-III_REQ20046105-1
December 8, 2024 at 1:28 AM
Wanna code for the #GeneOntology project? We have a position open, can be based in Berkeley or LA. https://usc.wd5.myworkdayjobs.com/ExternalUSCCareers/job/Los-Angeles-CA---Health-Sciences-Campus/Programmer-Analyst-III_REQ20046105-1
Great question on #GeneOntology list today from @bmeldal: can @biorxivpreprint or other #preprints be used as evidence in GO annotations (or other #biocuration)? What do you all think? #bioPeerReview #ASAPbio @biocurator
December 8, 2024 at 1:07 AM
Great question on #GeneOntology list today from @bmeldal: can @biorxivpreprint or other #preprints be used as evidence in GO annotations (or other #biocuration)? What do you all think? #bioPeerReview #ASAPbio @biocurator
🧬New article: "getENRICH: a tool for the gene and pathway enrichment analysis of non-model organisms"
Full access here: https://doi.org/10.1093/bioadv/vbaf023
#GeneOntology #PathwayAnalysis
Full access here: https://doi.org/10.1093/bioadv/vbaf023
#GeneOntology #PathwayAnalysis
February 20, 2025 at 2:02 PM
🧬New article: "getENRICH: a tool for the gene and pathway enrichment analysis of non-model organisms"
Full access here: https://doi.org/10.1093/bioadv/vbaf023
#GeneOntology #PathwayAnalysis
Full access here: https://doi.org/10.1093/bioadv/vbaf023
#GeneOntology #PathwayAnalysis
Excellent talk by Rund Tawfiq on a systems view of GO annotations, considering not each GO term and each protein separately, but the coverage of consistent functions over a genome. #ismbeccb2025 #geneontology
https://www.biorxiv.org/content/10.1101/2025.07.14.664848v1
https://www.biorxiv.org/content/10.1101/2025.07.14.664848v1
July 22, 2025 at 2:03 PM
Excellent talk by Rund Tawfiq on a systems view of GO annotations, considering not each GO term and each protein separately, but the coverage of consistent functions over a genome. #ismbeccb2025 #geneontology
https://www.biorxiv.org/content/10.1101/2025.07.14.664848v1
https://www.biorxiv.org/content/10.1101/2025.07.14.664848v1
I thought this live-stream would perform a lot better, are people not interested in how pathway ORA works?
youtube.com/live/MJ4A5fmgW…#Bioinformaticsc#RStatst#Pathwaysy#ORAR#GeneOntologyg#fromScratchch
youtube.com/live/MJ4A5fmgW…#Bioinformaticsc#RStatst#Pathwaysy#ORAR#GeneOntologyg#fromScratchch
December 8, 2024 at 11:09 AM
I thought this live-stream would perform a lot better, are people not interested in how pathway ORA works?
youtube.com/live/MJ4A5fmgW…#Bioinformaticsc#RStatst#Pathwaysy#ORAR#GeneOntologyg#fromScratchch
youtube.com/live/MJ4A5fmgW…#Bioinformaticsc#RStatst#Pathwaysy#ORAR#GeneOntologyg#fromScratchch
2026-06-19 GO Release is out
📊 38,263 #GeneOntology terms
🔬 14,736,040 annotations
🦠 171 species
🔗 current.geneontology.org
🚨 File URLs changed, breaking automated downloads-update ASAP
📋 Help & release deets: @alliancegenome.bsky.social forums: community.alliancegenome.org/t/8689
#Bioinformatics
📊 38,263 #GeneOntology terms
🔬 14,736,040 annotations
🦠 171 species
🔗 current.geneontology.org
🚨 File URLs changed, breaking automated downloads-update ASAP
📋 Help & release deets: @alliancegenome.bsky.social forums: community.alliancegenome.org/t/8689
#Bioinformatics
Bill Nye The Science Guy: This Changes Everything
ALT: Bill Nye The Science Guy: This Changes Everything
static.klipy.com
July 1, 2026 at 1:30 AM
2026-06-19 GO Release is out
📊 38,263 #GeneOntology terms
🔬 14,736,040 annotations
🦠 171 species
🔗 current.geneontology.org
🚨 File URLs changed, breaking automated downloads-update ASAP
📋 Help & release deets: @alliancegenome.bsky.social forums: community.alliancegenome.org/t/8689
#Bioinformatics
📊 38,263 #GeneOntology terms
🔬 14,736,040 annotations
🦠 171 species
🔗 current.geneontology.org
🚨 File URLs changed, breaking automated downloads-update ASAP
📋 Help & release deets: @alliancegenome.bsky.social forums: community.alliancegenome.org/t/8689
#Bioinformatics
🐰 The Easter bunny delivered early! The March 2026 Gene Ontology release is here with 38,560 GO terms, 8.8M annotations across 5,557 species. Your functional genomics just got a spring upgrade!
🔗 current.geneontology.org
📋 community.alliancegenome.org/t/8648
#GeneOntology #Bioinformatics #Genomics
🔗 current.geneontology.org
📋 community.alliancegenome.org/t/8648
#GeneOntology #Bioinformatics #Genomics
March 2026 GO Release now available
March 2026 GO Release (2026-03-25) Now Available We’re pleased to announce that the March 2026 Gene Ontology release is now live! Quick Access Links Current Release: https://current.geneontology.org...
community.alliancegenome.org
April 4, 2026 at 1:25 AM
🐰 The Easter bunny delivered early! The March 2026 Gene Ontology release is here with 38,560 GO terms, 8.8M annotations across 5,557 species. Your functional genomics just got a spring upgrade!
🔗 current.geneontology.org
📋 community.alliancegenome.org/t/8648
#GeneOntology #Bioinformatics #Genomics
🔗 current.geneontology.org
📋 community.alliancegenome.org/t/8648
#GeneOntology #Bioinformatics #Genomics