The #phylogeny and #biogeographic history of the Ulmaceae have long been poorly understood.
In this study, Zhang et al. reconstruct #phylogenetic relationships within the family and infer spatio-temporal #diversification patterns. jse.ac.cn/EN/10.1111/j...
#PlantScience #evolution
In this study, Zhang et al. reconstruct #phylogenetic relationships within the family and infer spatio-temporal #diversification patterns. jse.ac.cn/EN/10.1111/j...
#PlantScience #evolution
April 7, 2025 at 1:26 PM
The #phylogeny and #biogeographic history of the Ulmaceae have long been poorly understood.
In this study, Zhang et al. reconstruct #phylogenetic relationships within the family and infer spatio-temporal #diversification patterns. jse.ac.cn/EN/10.1111/j...
#PlantScience #evolution
In this study, Zhang et al. reconstruct #phylogenetic relationships within the family and infer spatio-temporal #diversification patterns. jse.ac.cn/EN/10.1111/j...
#PlantScience #evolution
Nanopore sequencing of nested nrDNA barcodes reliably identifies orchid bees (Euglossini, Apidae) https://www.biorxiv.org/content/10.64898/2026.08.25.747120v1
August 26, 2026 at 3:01 PM
Nanopore sequencing of nested nrDNA barcodes reliably identifies orchid bees (Euglossini, Apidae) https://www.biorxiv.org/content/10.64898/2026.08.25.747120v1
Zhang et al. show that #plastome and nrDNA are effective super-#barcodes for spp. discrimination in Chimonocalamus and, with Skmer analysis for molecular identification, help ID cryptic new #species.
doi.org/10.1111/jse....
@wileyeco.bsky.social
#systematics #DataScience #PlantScience
doi.org/10.1111/jse....
@wileyeco.bsky.social
#systematics #DataScience #PlantScience
DNA barcoding and cryptic new species confirmation of Chimonocalamus (Poaceae: Bambusoideae)
In order to better exploit the nuclear reads from genome skimming data, an assembly-free and alignment-free analysis method, Skmer analysis, was adopted in a DNA barcoding study of the bamboo genus C...
doi.org
November 3, 2025 at 3:42 PM
Zhang et al. show that #plastome and nrDNA are effective super-#barcodes for spp. discrimination in Chimonocalamus and, with Skmer analysis for molecular identification, help ID cryptic new #species.
doi.org/10.1111/jse....
@wileyeco.bsky.social
#systematics #DataScience #PlantScience
doi.org/10.1111/jse....
@wileyeco.bsky.social
#systematics #DataScience #PlantScience
#HSE #HealthServiceExecutive #Ireland #hidradenitissuppurativa #HS #axialspondyloarthritis #axSpA #Bimekizumab #BIMZELEX #NadegeFeeser #Immunology #UCB #chronicdiseases #BrianKirby #Dermatology #HSpatients #phase3studies #clinicaltrial #BEHEARD1 #BEHEARD2 #moderatetosevereHS
zurl.co/NrDNa
zurl.co/NrDNa
HSE approves new treatment for hidradenitis suppurativa and axial spondyloarthritis - PharmaTimes
Bimekizumab offers fresh option for patients with chronic conditions
pharmatimes.com
December 1, 2025 at 11:07 AM
In their study, they provided an expanded evolutionary perspective on Malacothrix and relatives based on nrDNA, incorporating the 2003 samples and an additional 21 samples, with a special focus on diversity in the Channel Islands.
If you are interested in learning more:
doi.org/10.3120/0024...
If you are interested in learning more:
doi.org/10.3120/0024...
doi.org
July 6, 2026 at 9:41 PM
In their study, they provided an expanded evolutionary perspective on Malacothrix and relatives based on nrDNA, incorporating the 2003 samples and an additional 21 samples, with a special focus on diversity in the Channel Islands.
If you are interested in learning more:
doi.org/10.3120/0024...
If you are interested in learning more:
doi.org/10.3120/0024...
This week in Madroño, we had the privilege of reading more about the evolution and diversity of Malacothrix and its relatives! In a study conducted by W. S. Davis et al, they followed up on a 2003 study that had previously resolved Malacothrix DC as paraphyletic, with two well-supported nrDNA clades
July 6, 2026 at 9:41 PM
This week in Madroño, we had the privilege of reading more about the evolution and diversity of Malacothrix and its relatives! In a study conducted by W. S. Davis et al, they followed up on a 2003 study that had previously resolved Malacothrix DC as paraphyletic, with two well-supported nrDNA clades
4/5 …(2016) suggest that Arup had been misled into distinguishing C vitellinula from C holocarpa because sample was too geographically restricted. (See linked.) As for A cerinelloides: apothecia said to be 'smaller', but substrate and thallus seem wrong. All in… www.researchgate.net/publication/...
(PDF) Taxonomy of the genus Athallia and its diversity in Turkey
PDF | Molecular analyses of ITS nrDNA, using 42 new and 56 GenBank sequences, revealed 12 supported lineages of Athallia consistent with phenotype data.... | Find, read and cite all the research you n...
www.researchgate.net
June 12, 2025 at 9:11 AM
4/5 …(2016) suggest that Arup had been misled into distinguishing C vitellinula from C holocarpa because sample was too geographically restricted. (See linked.) As for A cerinelloides: apothecia said to be 'smaller', but substrate and thallus seem wrong. All in… www.researchgate.net/publication/...
短報
マツカサタケの形態的特徴と系統解析および基質に基づく再同定
doi.org/10.18962/jjo...
“マツカサタケは，長らくAuriscalpium vulgareと同定されてきたが，担子胞子の形態はA. orientaleの特徴と一致した．また，nrDNA ITSおよびLSU領域の塩基配列を用いた分子系統解析ではA. orientaleのクレードに含まれた．さらに，マツカサタケはA. orientaleと同じ基質嗜好性を示した．これらの結果から，マツカサタケは中国から記載されたA. orientaleであると結論づけた．”
#菌学会 #日菌報 #OA
マツカサタケの形態的特徴と系統解析および基質に基づく再同定
doi.org/10.18962/jjo...
“マツカサタケは，長らくAuriscalpium vulgareと同定されてきたが，担子胞子の形態はA. orientaleの特徴と一致した．また，nrDNA ITSおよびLSU領域の塩基配列を用いた分子系統解析ではA. orientaleのクレードに含まれた．さらに，マツカサタケはA. orientaleと同じ基質嗜好性を示した．これらの結果から，マツカサタケは中国から記載されたA. orientaleであると結論づけた．”
#菌学会 #日菌報 #OA
March 11, 2024 at 7:42 AM
短報
マツカサタケの形態的特徴と系統解析および基質に基づく再同定
doi.org/10.18962/jjo...
“マツカサタケは，長らくAuriscalpium vulgareと同定されてきたが，担子胞子の形態はA. orientaleの特徴と一致した．また，nrDNA ITSおよびLSU領域の塩基配列を用いた分子系統解析ではA. orientaleのクレードに含まれた．さらに，マツカサタケはA. orientaleと同じ基質嗜好性を示した．これらの結果から，マツカサタケは中国から記載されたA. orientaleであると結論づけた．”
#菌学会 #日菌報 #OA
マツカサタケの形態的特徴と系統解析および基質に基づく再同定
doi.org/10.18962/jjo...
“マツカサタケは，長らくAuriscalpium vulgareと同定されてきたが，担子胞子の形態はA. orientaleの特徴と一致した．また，nrDNA ITSおよびLSU領域の塩基配列を用いた分子系統解析ではA. orientaleのクレードに含まれた．さらに，マツカサタケはA. orientaleと同じ基質嗜好性を示した．これらの結果から，マツカサタケは中国から記載されたA. orientaleであると結論づけた．”
#菌学会 #日菌報 #OA
Genetic diversity, phylogenetic relationships, and marker development between Hydrangea serrata and H. macrophylla based on plastome and 45S nrDNA https://pubmed.ncbi.nlm.nih.gov/42707416/
September 9, 2026 at 6:24 AM
Genetic diversity, phylogenetic relationships, and marker development between Hydrangea serrata and H. macrophylla based on plastome and 45S nrDNA https://pubmed.ncbi.nlm.nih.gov/42707416/
Nanopore sequencing of nested nrDNA barcodes reliably identifies orchid bees (Euglossini, Apidae) https://www.biorxiv.org/content/10.64898/2026.08.25.747120v1
August 26, 2026 at 3:01 PM
Nanopore sequencing of nested nrDNA barcodes reliably identifies orchid bees (Euglossini, Apidae) https://www.biorxiv.org/content/10.64898/2026.08.25.747120v1
Characterization of the complete plastid genome and 45S nrDNA sequences of Murdannia medica (Lour.) D.Y. Hong (Commelinaceae) and its phylogenetic analysis https://pubmed.ncbi.nlm.nih.gov/42553711/
August 6, 2026 at 3:27 PM
Characterization of the complete plastid genome and 45S nrDNA sequences of Murdannia medica (Lour.) D.Y. Hong (Commelinaceae) and its phylogenetic analysis https://pubmed.ncbi.nlm.nih.gov/42553711/
Characterization of the complete plastid genome and 45S nrDNA sequences of Murdannia medica (Lour.) D.Y. Hong (Commelinaceae) and its phylogenetic analysis https://pubmed.ncbi.nlm.nih.gov/42553711/
August 6, 2026 at 3:32 AM
Characterization of the complete plastid genome and 45S nrDNA sequences of Murdannia medica (Lour.) D.Y. Hong (Commelinaceae) and its phylogenetic analysis https://pubmed.ncbi.nlm.nih.gov/42553711/
Not in the same section I believe - sect. Jacobaea doesn't seem to contain it (see bsapubs.onlinelibrary.wiley.com/doi/full/10.... for the original listing and www.sciencedirect.com/science/arti... for a follow-up).
S. congestus is now known as Tephroseris palustris, fwiw
S. congestus is now known as Tephroseris palustris, fwiw
Tackling speciose genera: species composition and phylogenetic position of <i>Senecio</i> sect. <i>Jacobaea</i> (Asteraceae) based onplastid and nrDNA sequences<link href='#FN1'></link>
The molecular phylogeny of Senecio sect. Jacobaea (Asteraceae; Senecioneae) was studied to clarify species composition and interspecific relationships of Senecio sect. Jacobaea. This information is n...
bsapubs.onlinelibrary.wiley.com
July 9, 2026 at 12:11 AM
Not in the same section I believe - sect. Jacobaea doesn't seem to contain it (see bsapubs.onlinelibrary.wiley.com/doi/full/10.... for the original listing and www.sciencedirect.com/science/arti... for a follow-up).
S. congestus is now known as Tephroseris palustris, fwiw
S. congestus is now known as Tephroseris palustris, fwiw
A recent study investigated ways to improve health and found some surprising benefits of regular exercise. Turns out, just a little movement each day can significantly boost your well-being, leading to a happier and healthier life. Who knew feeling great could be so simple!
Correction: Authentication of Allium ulleungense, A. microdictyon and A. ochotense based on super-barcoding of plastid genome and 45S nrDNA.
Published in PloS one
doi.org
December 28, 2024 at 8:11 AM
A recent study investigated ways to improve health and found some surprising benefits of regular exercise. Turns out, just a little movement each day can significantly boost your well-being, leading to a happier and healthier life. Who knew feeling great could be so simple!
A new study by Ahn and colleagues shows high genomic diversity and intermixing among Ligularia plant lineages on the Korean Peninsula and Mt. Hallasan, suggesting frequent hybridization and complex evolutionary relationships.
Genomic diversity of Ligularia revealed by complete plastid genomes and nuclear ribosomal DNAs from 16 collections in Korean Peninsula and Mt. Hallasan
Plastid genome (plastome) and nuclear ribosomal DNA (nrDNA) sequences were assembled from 16 Ligularia accessions, including L. fischeri, L. fischeri var. spiciformis, and L. stenocephala. The…
plos.io
March 2, 2026 at 8:01 AM
A new study by Ahn and colleagues shows high genomic diversity and intermixing among Ligularia plant lineages on the Korean Peninsula and Mt. Hallasan, suggesting frequent hybridization and complex evolutionary relationships.
Cortinarius swatensis sp. nov. (Basidiomycota; Agaricales) in C. subg. Infracti from Pakistan, based on morphology, microscopy and phylogeny
#Cortinarius
#Basidiomycota
#Agaricales
#Infracti
#ITS
#nrDNA
#scanningelectronmicroscopy
#Swat
#taxonomy
www.researchgate.net/publication/...
#Cortinarius
#Basidiomycota
#Agaricales
#Infracti
#ITS
#nrDNA
#scanningelectronmicroscopy
#Swat
#taxonomy
www.researchgate.net/publication/...
(PDF) Cortinarius swatensis sp. nov. (Basidiomycota; Agaricales) in C. subg. Infracti from Pakistan, based on morphology, microscopy and phylogeny
PDF | Cortinarius swatensis sp. nov. was collected from the District Swat, Khyber Pakhtunkhwa Province, Pakistan. This new species is characterized by... | Find, read and cite all the research you nee...
www.researchgate.net
September 22, 2025 at 12:00 PM
Cortinarius swatensis sp. nov. (Basidiomycota; Agaricales) in C. subg. Infracti from Pakistan, based on morphology, microscopy and phylogeny
#Cortinarius
#Basidiomycota
#Agaricales
#Infracti
#ITS
#nrDNA
#scanningelectronmicroscopy
#Swat
#taxonomy
www.researchgate.net/publication/...
#Cortinarius
#Basidiomycota
#Agaricales
#Infracti
#ITS
#nrDNA
#scanningelectronmicroscopy
#Swat
#taxonomy
www.researchgate.net/publication/...
New paper in TAXON using @gbif.org mediated data:
Phylogeny and biogeography of Impatiens sect. Racemosae (Balsaminaceae) based on nrDNA and plastome sequences, emphasizing diversification in the Himalaya and the Hengduan Mountains
#CiteTheDOI: ✅
https://doi.org/10.1002/tax.13352
Phylogeny and biogeography of Impatiens sect. Racemosae (Balsaminaceae) based on nrDNA and plastome sequences, emphasizing diversification in the Himalaya and the Hengduan Mountains
#CiteTheDOI: ✅
https://doi.org/10.1002/tax.13352
Phylogeny and biogeography of Impatiens sect. Racemosae (Balsaminaceae) based on nrDNA and plastome sequences, emphasizing diversification in the Himalaya and the Hengduan Mountains
Elucidating the mechanisms driving evolutionary radiation remains a crucial yet challenging endeavor, particularly regarding the evolutionary processes of taxa within key biodiversity areas. In this ....
onlinelibrary.wiley.com
July 10, 2025 at 8:44 AM
New paper in TAXON using @gbif.org mediated data:
Phylogeny and biogeography of Impatiens sect. Racemosae (Balsaminaceae) based on nrDNA and plastome sequences, emphasizing diversification in the Himalaya and the Hengduan Mountains
#CiteTheDOI: ✅
https://doi.org/10.1002/tax.13352
Phylogeny and biogeography of Impatiens sect. Racemosae (Balsaminaceae) based on nrDNA and plastome sequences, emphasizing diversification in the Himalaya and the Hengduan Mountains
#CiteTheDOI: ✅
https://doi.org/10.1002/tax.13352
Now out: doi.org/10.1002/ece3...
#OTU vs. #ASV, #Mothur vs. #DADA2 or how to get down from 100,000 sequences to the 100 really needed. A test on 5S intergenic spacer pools of #beech
#OpenAccess #Genotaxonomy #Reticulate #Evolution #nrDNA
#OTU vs. #ASV, #Mothur vs. #DADA2 or how to get down from 100,000 sequences to the 100 really needed. A test on 5S intergenic spacer pools of #beech
#OpenAccess #Genotaxonomy #Reticulate #Evolution #nrDNA
Pruning the Tree: Comparing OTUs and ASVs in High‐Throughput Sequencing of 5S‐IGS Nuclear Ribosomal DNA in Phylogenetic Studies
We compared the efficiency of operational taxonomic units (OTUs) and amplicon sequence variants (ASVs) of the 5S nrDNA arrays in evolutionary studies of a prominent tree genus of the Northern Hemisph....
doi.org
October 8, 2025 at 10:06 AM
Now out: doi.org/10.1002/ece3...
#OTU vs. #ASV, #Mothur vs. #DADA2 or how to get down from 100,000 sequences to the 100 really needed. A test on 5S intergenic spacer pools of #beech
#OpenAccess #Genotaxonomy #Reticulate #Evolution #nrDNA
#OTU vs. #ASV, #Mothur vs. #DADA2 or how to get down from 100,000 sequences to the 100 really needed. A test on 5S intergenic spacer pools of #beech
#OpenAccess #Genotaxonomy #Reticulate #Evolution #nrDNA
Genetic Variation and Phylogenetic Analysis of Indonesian Sugarcane (Saccharum officinarum L.) based on Internal Transcribed Spacer (ITS-nrDNA) https://pubmed.ncbi.nlm.nih.gov/42064429/
May 2, 2026 at 2:15 PM
Genetic Variation and Phylogenetic Analysis of Indonesian Sugarcane (Saccharum officinarum L.) based on Internal Transcribed Spacer (ITS-nrDNA) https://pubmed.ncbi.nlm.nih.gov/42064429/
Genetic Variation and Phylogenetic Analysis of Indonesian Sugarcane (Saccharum officinarum L.) based on Internal Transcribed Spacer (ITS-nrDNA) https://pubmed.ncbi.nlm.nih.gov/42064429/
May 2, 2026 at 6:40 AM
Genetic Variation and Phylogenetic Analysis of Indonesian Sugarcane (Saccharum officinarum L.) based on Internal Transcribed Spacer (ITS-nrDNA) https://pubmed.ncbi.nlm.nih.gov/42064429/
Extensive nrDNA Polymorphism in Morus L. and Its Application https://pubmed.ncbi.nlm.nih.gov/40872193/
August 29, 2025 at 12:53 PM
Extensive nrDNA Polymorphism in Morus L. and Its Application https://pubmed.ncbi.nlm.nih.gov/40872193/