#PIPseq
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antobeck.bsky.social
Didn’t think I’d be interested in droplets/partitions/emulsions again after leaving Bio Rad. But, I’m back on the droplet wagon at #illumina with #PIPSeq V #singlecell
November 29, 2024 at 8:37 PM
antobeck.bsky.social
A little video intro into Illumina Single Cell 3' RNA Prep protocols. It has begun!!
#singlecell
#transcriptomics
#PIPSeq
#illumina
pmishra.bsky.social Priyanka Mishra, PhD (She/Her) @pmishra.bsky.social · Jan 10
🧬Two updated technical videos demonstrating T2 and T20 workflows on newly released #Illumina Single-Cell 3' RNA Prep
T2: www.youtube.com/watch?v=4i5k...
T20: www.youtube.com/watch?featur...

📰 www.prnewswire.com/news-release...
January 13, 2025 at 7:54 AM
caleblareau.bsky.social
Trying a slightly new model (for us at least) of #openscience. With @ronanchaligne.bsky.social and @karolisk.bsky.social, we pitted 10x Genomics Chromium GEM-X against Illumina PIPseq V head-to-head to understand these two platforms for single-cell genomics. Some thoughts off the bleeding edge: /1
a baby is eating a piece of food while sitting on the ground .
ALT: a baby is eating a piece of food while sitting on the ground .
media.tenor.com
March 14, 2025 at 1:29 PM
epigenometech.bsky.social
Epigenome Technologies have recently expanded their single cell epigenetics assays

Our Emulsion scCUT&Tag assay is now compatible with the Illumina PIPseq platform

Learn more at lnkd.in/g3YqPrWY

#SingleCell #EpigenomeTech #PairedTag #Multiomics #Epigenetics #scCUTandTag #PIPseq
October 21, 2025 at 7:02 PM
caleblareau.bsky.social
The differences start to emerge when you look a bit more closely. In terms of molecular complexity, PIPseq performed pretty well, but there's a pretty massive difference compared to GEM-X. At similar cell numbers and sequencing depth, we get about 63% more UMIs / cell with GEM-X over PIPseq V /7
March 14, 2025 at 1:29 PM
vivek-mishra.bsky.social
#PIPSeq V
#accessible #scalable and #flexible #singlecell solution for #everylab
antobeck.bsky.social Anthony Beckhouse @antobeck.bsky.social · Nov 29
Didn’t think I’d be interested in droplets/partitions/emulsions again after leaving Bio Rad. But, I’m back on the droplet wagon at #illumina with #PIPSeq V #singlecell
November 30, 2024 at 7:30 PM
epigenometech.bsky.social
We have recently expanded our single-cell epigenetics assays!

Our Emulsion scCUT&Tag assay is now compatible with the Illumina PIPseq platform

Learn more here: bit.ly/4lquJDv

#SingleCell #EpigenomeTech #PairedTag #Multiomics #Epigenetics #scCUTandTag #PIPseq
February 23, 2026 at 4:37 PM
epigenometech.bsky.social
We have recently expanded our single-cell epigenetics assays!

Our Emulsion scCUT&Tag assay is now compatible with the Illumina PIPseq platform

Learn more at lnkd.in/g3YqPrWY

#SingleCell #EpigenomeTech #PairedTag #Multiomics #Epigenetics #scCUTandTag #PIPseq
November 14, 2025 at 4:54 PM
catharineaquino.bsky.social
A Promising Single Cell Alternative
Before we roll out any new service, internal benchmarking is a must. This time we tested Illumina’s Single Cell 3' RNA prep kit (which I will call PIPseq) against the reigning champ, 10x Genomics GEMX 3' Gene Expression kit (GEMX for short).
What we found:
July 27, 2025 at 7:07 PM
caleblareau.bsky.social
As I've been doing single-cell for ~10 years now, I can confidently say that GEM-X is just a really, really good product and the platform where you'll see the next few developments from us. That said, the fact that PIPseq looks promising on our first try is encouraging for future products. /10
March 14, 2025 at 1:29 PM
caleblareau.bsky.social
I found it frustrating that the PIPseq V paper (www.biorxiv.org/content/10.1...) did not provide data for V technology publicly (www.fluentbio.com/datasets/ stops at v4; 'available upon request' is not acceptable in 2025). It's hard to use new tech where data isn't easily accessible! /11
March 14, 2025 at 1:29 PM
antobeck.bsky.social
One billion cell atlas project from #Illumina and collaborators AstraZeneca, Eli Lily and Merck
#singlecell #perturbseq #PIPseq

www.illumina.com/company/news...
Illumina introduces Billion Cell Atlas to accelerate AI and drug discovery
www.illumina.com
January 17, 2026 at 7:16 AM
epigenometech.bsky.social
We have recently expanded our single-cell epigenetics assays!
Our Emulsion scCUT&Tag assay is now compatible with the Illumina PIP-seq platform

Learn more here: bit.ly/4lquJDv

#SingleCell #EpigenomeTech #PairedTag #Multiomics #Epigenetics #scCUTandTag #PIPseq
May 12, 2026 at 2:46 PM
epigenometech.bsky.social
We have recently expanded our single-cell epigenetics assays!

Our Emulsion scCUT&Tag assay is now compatible with the Illumina PIP-seq platform

Learn more here: bit.ly/4lquJDv

#SingleCell #EpigenomeTech #PairedTag #Multiomics #Epigenetics #scCUTandTag #PIPseq
May 29, 2026 at 4:02 PM
epigenometech.bsky.social
We have recently expanded our single-cell epigenetics assays!
Our Emulsion scCUT&Tag assay is now compatible with the Illumina PIP-seq platform

#SingleCell #EpigenomeTech #PairedTag #Multiomics #Epigenetics #scCUTandTag #PIPseq

Learn more here: u.epigenome.us/NYjSGQao
July 21, 2026 at 6:20 PM
epigenometech.bsky.social
We have recently expanded our single-cell epigenetics assays!
Our Emulsion scCUT&Tag assay is now compatible with the Illumina PIPseq platform

Learn more here: bit.ly/4lquJDv

#SingleCell #EpigenomeTech #PairedTag #Multiomics #Epigenetics #scCUTandTag #PIPseq
March 17, 2026 at 4:20 PM
epigenometech.bsky.social
We have recently expanded our single-cell epigenetics assays!
Our Emulsion scCUT&Tag assay is now compatible with the Illumina PIPseq platform

Learn more here: bit.ly/4lquJDv

#SingleCell #EpigenomeTech #PairedTag #Multiomics #Epigenetics #scCUTandTag #PIPseq
January 6, 2026 at 4:19 PM
epigenometech.bsky.social
We have recently expanded our single-cell epigenetics assays!
Our Emulsion scCUT&Tag assay is now compatible with the Illumina PIPseq platform

Learn more at lnkd.in/g3YqPrWY

#SingleCell #EpigenomeTech #PairedTag #Multiomics #Epigenetics #scCUTandTag #PIPseq
December 2, 2025 at 3:59 PM
epigenometech.bsky.social
We have recently expanded our single-cell epigenetics assays!
Our Emulsion scCUT&Tag assay is now compatible with the Illumina PIPseq platform

Learn more at lnkd.in/g3YqPrWY

#SingleCell #EpigenomeTech #PairedTag #Multiomics #Epigenetics #scCUTandTag #PIPseq
December 16, 2025 at 4:11 PM
epigenometech.bsky.social
We have recently expanded our single-cell epigenetics assays!
Our Emulsion scCUT&Tag assay is now compatible with the Illumina PIPseq platform

Learn more here: bit.ly/4lquJDv

#SingleCell #EpigenomeTech #PairedTag #Multiomics #Epigenetics #scCUTandTag #PIPseq
April 6, 2026 at 3:44 PM
epigenometech.bsky.social
We have recently expanded our single-cell epigenetics assays!

Our Emulsion scCUT&Tag assay is now compatible with the Illumina PIPseq platform

Learn more here: bit.ly/4lquJDv

#SingleCell #EpigenomeTech #PairedTag #Multiomics #Epigenetics #scCUTandTag #PIPseq
January 26, 2026 at 4:34 PM
epigenometech.bsky.social
Epigenome Technologies have recently expanded their single cell epigenetics assays

Our Emulsion scCUT&Tag assay is now compatible with the Illumina PIPseq platform

Learn more at lnkd.in/g3YqPrWY

#SingleCell #EpigenomeTech #PairedTag #Multiomics #Epigenetics #scCUTandTag #PIPseq
October 30, 2025 at 4:55 PM
altspliced.bsky.social
Intriguing indeed. The Al'Khafaji lab recently compared PIPseq and 10x for isoform sequencing. Although PIPseq v4, diff. gene capture between platforms is evident. They suggest that some of it might be due to high RNAse content after more cell stress in the PIPseq protocol. bsky.app/profile/aziz...
azizalkhafaji.bsky.social Aziz Al'Khafaji @azizalkhafaji.bsky.social · Mar 2
Fitting first post to BlueSky
Recapping a whirlwind week.. 1) isoforms, 2)illumina, 3)SBX

1) Check out our new preprint: Multi-platform evaluation and optimization of single-cell RNA isoform sequencing.

Ever wonder if/how different single-cell platforms impact RNA isoform sequencing performance?
Multi-platform evaluation and optimization of single-cell RNA isoform sequencing
Long-read transcriptomics enables isoform identification and quantification at single-cell resolution, but analysis is complicated by artifacts introduced during library preparation. We characterize t...
www.biorxiv.org
March 15, 2025 at 4:45 PM
ramacgenomics.bsky.social
#Singlecellsequencing at the Ramaciotti Centre! 🚀Announcing our pioneering Fluent PIP-seq V single-cell project, for @katequinlan.bsky.social of @unswbabs.bsky.social The #pipseq technology is simple, scalable, cost-effective NGS workflow recently acquired by #Illumina - check our LinkedIn for info🧬
April 16, 2025 at 5:56 AM
evolvwing.bsky.social
PIPseq emulsions + Illumina library prep kit
seems promising
www.illumina.com/products/by-...
Illumina Single Cell 3' RNA Prep
Accessible and highly scalable single-cell RNA-Seq solution for mRNA capture, barcoding, and library prep without complex workflows or microfluidics
www.illumina.com
January 15, 2025 at 5:40 AM