Glycans coat every cell but resist single-cell analysis because they are not encoded in the genome. A method that barcodes cell-surface sugars for single-cell sequencing reveals which tumor-infiltrati...

Phase 1 of TenK10K takes single-cell RNA sequencing and matched whole-genome sequencing data from 1,925 individuals, enabling detection of associations for common and rare genetic variants, the latter of which have been uncharacterized in their impact on cell-specific gene expression.

From rodents to humans, tools that enable large-scale, single-cell neuronal recordings are exposing the inner workings of the brain.

A deep single-cell and spatial multi-omic atlas of human glioblastoma is generated, pairing transcriptomic, epigenomic and genomic profiling, and tracing glioblastoma tumour heterogeneity to a stereotyped and spatially patterned trajectory of cancer cells.

Recent advances in shotgun proteomics and immunoassays have yielded powerful single-cell proteomics technologies. However, current methods lack the sensitivity required to comprehensively quantify protein abundances in individual cells. Here, we present single-cell PAGE-PISA, an ultra-sensitive proteome profiling strategy that combines gel electrophoresis with 3D single-molecule fluorescence imaging. Our approach labels all proteins in single cells with fluorescent dyes, separates them by electrophoresis, and counts with single-molecule resolution. This technique quantified over 107 protein copies from a single mammalian cell with the sensitivity to detect low-abundance proteins down to 105 copies per species. Single-cell PAGE-PISA successfully classified cells into distinct cell types based on their proteomic profiles. Furthermore, our single-cell proteome data strongly correlated with predicted developmental states during cardiomyocyte differentiation, providing complementary informa

A complete cell type transcriptome atlas of a vertebrate could promote understanding of animal cell type composition, organization, and evolution. The miniaturized, transparent, and regenerative teleo...

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