#genomeevolution
PREPRINT ALERT!
Determinants of chromosomal rearrangements in holocentric Leptidea butterflies
www.biorxiv.org/content/10.6...

Massive #chromosome reshuffling in Leptidea #butterflies reveals how satellite DNA, rDNA, and duplications—not #transposons, shape the architecture of #genomeevolution.
www.biorxiv.org
March 24, 2026 at 4:26 PM
Join our online course on Sex Chromosome Evolution (6–10 Oct) with @astridboehne.bsky.social & @idarolti.bsky.social to gain hands-on experience in genomic and transcriptomic analyses.
www.physalia-courses.org/courses-work...

#SexChromosomes #GenomeEvolution #Transcriptomics #ComparativeGenomics
Sex chromosome evolution
Dates 6-10 October 2025 To foster international participation, this course will be held online
www.physalia-courses.org
September 17, 2025 at 3:37 PM
It's not too late to share the clicks from the last “RNA-guided genome protection” @embo.org in Switzerland 🇨🇭 what a great time! A dream come true meeting the RNAi guys that I’ve cited in my works since 2016 🥹 #RNAsky #genomeevolution
June 28, 2026 at 4:42 PM
BMC Biology is currently welcoming submissions of original research to the “Genome organization and evolution” Collection, which I am supporting as a Guest Editor.

If interested check out the link: www.biomedcentral.com/collections/...

Deadline: 26 March

#GenomeEvolution
@bmc.springernature.com
February 4, 2026 at 11:19 AM
BMC Biology is currently welcoming submissions of original research to the “Genome organization and evolution” Collection, which I am supporting as a Guest Editor.

If interested check out the link: www.biomedcentral.com/collections/...

#GenomeEvolution @bmc.springernature.com
July 11, 2025 at 9:37 AM
3️⃣ Sex without crossovers mimics clonal reproduction in Rhynchospora tenuis

🌱 An extreme meiotic outcome: faithful segregation without crossovers in a holocentric plant.
🔗 doi.org/10.64898/202...

#Preprint #GenomeEvolution #Meiosis4eva #centromere #Pangenomics
Sex without crossovers mimics clonal reproduction in the holocentric plant Rhynchospora tenuis
Meiotic recombination ensures accurate chromosome segregation and promotes genetic diversity by generating crossovers between homologous chromosomes. While essential in most sexually reproducing organisms, recombination is variably regulated and can be absent in some lineages, a condition known as achiasmy. However, obligate achiasmy in both sexes of a sexual species has not been previously documented. Here, we investigate the beak-sedge Rhynchospora tenuis, a holocentric plant with the lowest known chromosome number among flowering plants (n = 2) and inverted meiosis. Using chromosome-scale genome assemblies from nine accessions, molecular cytogenetics, immunocytochemistry, high-throughput single-gamete sequencing and whole-genome sequencing of controlled crosses, we show that R. tenuis undergoes obligate, genome-wide achiasmy in both male and female meiosis. Despite normal early meiotic axis formation, synapsis fails, crossovers are not detected cytologically or genetically, and univalents persist at metaphase I. Extensive haplotype-specific accumulation of transposable elements (TEs) generates segregation distortion (e.g. meiotic drive), favouring the transmission of larger, TE-rich chromosomes. Remarkably, sexual reproduction is retained with fertilisation producing viable seeds only when translocation-compatible gametes meet, indicating strong post-meiotic selection that eliminates incompatible homozygous combinations. As a result, all surviving offspring are genetically identical to the maternal genotype, effectively restoring heterozygosity each generation and mimicking clonal reproduction. We propose that the combined effects of recombination loss, low chromosome number, holocentricity, inverted meiosis, and selective transmission of longer chromosomes enable faithful segregation and clonal-like inheritance despite sexual reproduction. These findings challenge the boundary between sex and clonality, revealing a unique evolutionary strategy linking genome architecture, recombination loss, and transmission bias. ### Competing Interest Statement The authors have declared no competing interest.
doi.org
January 21, 2026 at 2:45 PM
No relationship between genome size evolution and effective population in animals, and no relationship with transposable elements either. #IsemEvol #GenomeEvolution

doi.org/10.7554/eLif...
Effective population size does not explain long-term variation in genome size and transposable element content in animals
doi.org
September 12, 2024 at 7:25 AM
Our paper synthesizing discussions from the @embo.org lecture course on Evolutionary and Comparative #Genomics in now out @bioinfoadv.bsky.social
#ComparativeGenomics #GenomeEvolution
🧬 Now published in Bioinformatics Advances: “Advances and challenges in understanding evolution through genome comparison.”

Read the full paper here: https://doi.org/10.1093/bioadv/vbaf223
October 20, 2025 at 12:17 PM
A phylogenetic estimate of canine retrotransposition rates based on genome assembly comparisons. #CanineGenomes #Retrotransposon #LINE1 #SINE #GenomeAssembly #GenomeEvolution #Genomics @biorxivpreprint.bsky.social 🧪🧬 🖥️
www.biorxiv.org/content/10.1...
November 7, 2025 at 7:05 PM
This meeting report from the 2024 EMBO Lecture Course on Evolutionary and Comparative Genomics highlights emerging trends across #genomeevolution, #AIapplications, #pangenomics, transposon dynamics, and the genetic basis of adaptation.
October 20, 2025 at 10:01 AM
Prokaryotic genome evolution lacks a unified model explaining how nucleotide composition and gene distribution evolve together. We analyzed 4,012 complete prokaryotic genomes to fill this gap.
Paper: doi.org/10.1111/jse....
#GenomeEvolution #Prokaryotes #MolecularEvolution
Genomic coordination of nucleotide skews and gene strand distribution driven by GC‐content in prokaryotes
The genome organization of 4218 prokaryotic representative genomes was analyzed, contributing to a novel mechanistic framework centered around the variation in GC-content. The variation in GC-content...
doi.org
August 10, 2026 at 7:29 AM
Kevin Aguirre-Carvajal & co show that our conclusions about gene transfer can change as more genomic data become available, highlighting the importance of continuously re-evaluating evolutionary hypotheses.
doi.org/10.1242/bio....

#GenomeEvolution #Phylogeny #NewHomologs
April 22, 2026 at 9:33 AM
🐈‍⬛ Join us on Tuesday at 11:00!
Don't miss the chance to learn about Pantera — a powerful tool that uses fast whole-genome alignment methods to advance our understanding of TEs and their roles in #genome evolution.

www.erga-biodiversity.eu/post/faster-...

#TransposableElements #GenomeEvolution
July 4, 2025 at 7:45 AM
What a great way to summarize the paper in <1 min gif. Congrats @pbeldade and team!
#Wolbachia #TransposableElements #GenomeEvolution
June 29, 2025 at 4:57 PM
Assembled 207Mb T2T Pucai genome! Exp gene families, unique WGD. Aids lignin/chlorophyll study & genome evolution. #PucaiGenome #GenomeEvolution @OxfordJournals
Details: doi.org/10.1093/hr/u...
The telomere-to-telomere genome of Pucai () (Typha angustifolia L.): a distinctive semiaquatic vegetable with lignin and chlorophyll as quality characteristics
Abstract. Pucai () (Typha angustifolia L.), within the Typha spp., is a distinctive semiaquatic vegetable. Lignin and chlorophyll are two crucial traits an
doi.org
May 13, 2025 at 3:22 PM
2/3 Unlike single-reference approaches, pangenome graphs represent many possible viral variants at once. This is especially valuable for viruses, which often exist as diverse and rapidly evolving populations.

#GPB #GenomeEvolution #ViralGenomics
June 22, 2026 at 2:58 AM