New version of my free ebook / textbook "Quantitative Concepts for Biologists", now with chapter 10 on Common Statistics Problems
doi.org/10.5281/zeno...
#biology #textbook #biostatistics #reproducibility #quantitativebiology
doi.org/10.5281/zeno...
#biology #textbook #biostatistics #reproducibility #quantitativebiology
Quantitative Concepts for Biologists
An introductory course on quantitative concepts in biology for students in biology and natural sciences.
doi.org
September 25, 2026 at 12:47 PM
New version of my free ebook / textbook "Quantitative Concepts for Biologists", now with chapter 10 on Common Statistics Problems
doi.org/10.5281/zeno...
#biology #textbook #biostatistics #reproducibility #quantitativebiology
doi.org/10.5281/zeno...
#biology #textbook #biostatistics #reproducibility #quantitativebiology
New version of my free ebook / textbook "Quantitative Concepts for Biologists", now with chapter 10 on Common Statistics Problems
doi.org/10.5281/zeno...
#biology #textbook #biostatistics #reproducibility #quantitativebiology
doi.org/10.5281/zeno...
#biology #textbook #biostatistics #reproducibility #quantitativebiology
Quantitative Concepts for Biologists
An introductory course on quantitative concepts in biology for students in biology and natural sciences.
doi.org
September 25, 2026 at 12:46 PM
New version of my free ebook / textbook "Quantitative Concepts for Biologists", now with chapter 10 on Common Statistics Problems
doi.org/10.5281/zeno...
#biology #textbook #biostatistics #reproducibility #quantitativebiology
doi.org/10.5281/zeno...
#biology #textbook #biostatistics #reproducibility #quantitativebiology
CC: @led3hub.bsky.social
#QuantitativeBiology #Interdisciplinarity #Quantification #Biology #ChemBio #DrugDiscovery
(3/3)
#QuantitativeBiology #Interdisciplinarity #Quantification #Biology #ChemBio #DrugDiscovery
(3/3)
August 27, 2026 at 8:16 AM
🚨 Qlife members — don’t miss this rare chance!
Join the Physical Biology of the Cell course by Rob Phillips!
📅 Sept 29–Oct 3, 2025
📍 Marseille
➡️ Deadline: August 20
🔗 More info: centuri-livingsystems.org/centuri-trai...
#QuantitativeBiology #course
Join the Physical Biology of the Cell course by Rob Phillips!
📅 Sept 29–Oct 3, 2025
📍 Marseille
➡️ Deadline: August 20
🔗 More info: centuri-livingsystems.org/centuri-trai...
#QuantitativeBiology #course
July 3, 2025 at 4:37 PM
🚨 Qlife members — don’t miss this rare chance!
Join the Physical Biology of the Cell course by Rob Phillips!
📅 Sept 29–Oct 3, 2025
📍 Marseille
➡️ Deadline: August 20
🔗 More info: centuri-livingsystems.org/centuri-trai...
#QuantitativeBiology #course
Join the Physical Biology of the Cell course by Rob Phillips!
📅 Sept 29–Oct 3, 2025
📍 Marseille
➡️ Deadline: August 20
🔗 More info: centuri-livingsystems.org/centuri-trai...
#QuantitativeBiology #course
Job - Alert 🚀
🎓 SEVEN PHD POSITIONS
Deadline: 2025-01-03
Location: Germany, Berlin
APPLY: www.academiceurope.com/job/?id=5964
#hiring #Biophysics #Epidemiology #Immunology #InfectionBiology #MedicalBiotechnology #Microbiology #Parasitology #PhD #quantitativebiology
🎓 SEVEN PHD POSITIONS
Deadline: 2025-01-03
Location: Germany, Berlin
APPLY: www.academiceurope.com/job/?id=5964
#hiring #Biophysics #Epidemiology #Immunology #InfectionBiology #MedicalBiotechnology #Microbiology #Parasitology #PhD #quantitativebiology
Academic Europe - Seven PhD Positions in Infection Biology, Immunology, Microbiology, Parasitology, Epidemiology, oa.
www.academiceurope.com
November 15, 2024 at 12:04 PM
Job - Alert 🚀
🎓 SEVEN PHD POSITIONS
Deadline: 2025-01-03
Location: Germany, Berlin
APPLY: www.academiceurope.com/job/?id=5964
#hiring #Biophysics #Epidemiology #Immunology #InfectionBiology #MedicalBiotechnology #Microbiology #Parasitology #PhD #quantitativebiology
🎓 SEVEN PHD POSITIONS
Deadline: 2025-01-03
Location: Germany, Berlin
APPLY: www.academiceurope.com/job/?id=5964
#hiring #Biophysics #Epidemiology #Immunology #InfectionBiology #MedicalBiotechnology #Microbiology #Parasitology #PhD #quantitativebiology
2/ The study was led by Hye-In Son, a former graduate student and now a Senior Scientist at BillionToOne, in collaboration with the lab of Tony Huang. Congratulations to all the authors! #quantitativebiology, #syntheticbiology, #HGT, #microfluidics
January 13, 2025 at 3:40 PM
2/ The study was led by Hye-In Son, a former graduate student and now a Senior Scientist at BillionToOne, in collaboration with the lab of Tony Huang. Congratulations to all the authors! #quantitativebiology, #syntheticbiology, #HGT, #microfluidics
Cell migration is fundamental to many biological processes (cancer metastasis, cellular immunity, development, ...). Here we introduce a new computational method & free tool to evaluate high-throughput cell migration assays.
#cancer #cellmigration #Bayes #quantitativebiology
doi.org/10.1371/jour...
#cancer #cellmigration #Bayes #quantitativebiology
doi.org/10.1371/jour...
Uncertainty-aware quantitative analysis of high-throughput live cell migration data
Author summary Cell migration velocity varies across biological processes–from immune responses to cancer metastasis. Yet accurate measurement remains challenging due to inherent cell-to-cell variabil...
doi.org
July 14, 2026 at 6:17 AM
Cell migration is fundamental to many biological processes (cancer metastasis, cellular immunity, development, ...). Here we introduce a new computational method & free tool to evaluate high-throughput cell migration assays.
#cancer #cellmigration #Bayes #quantitativebiology
doi.org/10.1371/jour...
#cancer #cellmigration #Bayes #quantitativebiology
doi.org/10.1371/jour...
If you are looking for an introductory textbook on #QuantitativeBiology for undergraduates: I have just uploaded a free book with exercise material that I have written over the last months. It is the first edition, so have mercy.
doi.org/10.5281/zeno...
#education #biology
doi.org/10.5281/zeno...
#education #biology
Quantitative Concepts for Biologists
An introductory course on quantitative concepts in biology for undergraduates in biology and natural sciences.
doi.org
July 9, 2026 at 8:23 AM
If you are looking for an introductory textbook on #QuantitativeBiology for undergraduates: I have just uploaded a free book with exercise material that I have written over the last months. It is the first edition, so have mercy.
doi.org/10.5281/zeno...
#education #biology
doi.org/10.5281/zeno...
#education #biology
New on ScienceOpen 🚀
All International Conferences on #Pharmacometrics (ICoP) Series publications from 2025 are now live on ScienceOpen.
🔗 Link to the 2025 ICoP Series publications in the first comment.
#Pharmacology #LifeSciences #QuantitativeBiology #OpenScience
All International Conferences on #Pharmacometrics (ICoP) Series publications from 2025 are now live on ScienceOpen.
🔗 Link to the 2025 ICoP Series publications in the first comment.
#Pharmacology #LifeSciences #QuantitativeBiology #OpenScience
February 26, 2026 at 2:01 PM
New on ScienceOpen 🚀
All International Conferences on #Pharmacometrics (ICoP) Series publications from 2025 are now live on ScienceOpen.
🔗 Link to the 2025 ICoP Series publications in the first comment.
#Pharmacology #LifeSciences #QuantitativeBiology #OpenScience
All International Conferences on #Pharmacometrics (ICoP) Series publications from 2025 are now live on ScienceOpen.
🔗 Link to the 2025 ICoP Series publications in the first comment.
#Pharmacology #LifeSciences #QuantitativeBiology #OpenScience
6/6
If you plate, you need REPOP.
Preprint -- doi.org/10.1101/2025...
Software -- github.com/PessoaP/REPOP
Special thanks to the Lab Members - Pedro Pessoa, Carol Lu and Stanimir Tashev
As well as Rory Kruithoff and Douglas P Shepherd
#Biophysics #QuantitativeBiology
If you plate, you need REPOP.
Preprint -- doi.org/10.1101/2025...
Software -- github.com/PessoaP/REPOP
Special thanks to the Lab Members - Pedro Pessoa, Carol Lu and Stanimir Tashev
As well as Rory Kruithoff and Douglas P Shepherd
#Biophysics #QuantitativeBiology
REPOP: bacterial population quantification from plate counts
Bacterial counts from native environments, such as soil or the animal gut, often show substantial variability across replicate samples. This heterogeneity is typically attributed to genetic or environ...
www.biorxiv.org
April 7, 2025 at 6:14 PM
6/6
If you plate, you need REPOP.
Preprint -- doi.org/10.1101/2025...
Software -- github.com/PessoaP/REPOP
Special thanks to the Lab Members - Pedro Pessoa, Carol Lu and Stanimir Tashev
As well as Rory Kruithoff and Douglas P Shepherd
#Biophysics #QuantitativeBiology
If you plate, you need REPOP.
Preprint -- doi.org/10.1101/2025...
Software -- github.com/PessoaP/REPOP
Special thanks to the Lab Members - Pedro Pessoa, Carol Lu and Stanimir Tashev
As well as Rory Kruithoff and Douglas P Shepherd
#Biophysics #QuantitativeBiology
Hello all, 📣📣📣
If you do #PlateCounting , I want you to take a look at this new preprint.🧫🧫🧫
If you don't, I still encourage you to join for an interesting discussion.
Follow the thread 🧵
doi.org/10.1101/2025...
#Microbiology #DataScience #PyTorch #QuantitativeBiology #REPOP
If you do #PlateCounting , I want you to take a look at this new preprint.🧫🧫🧫
If you don't, I still encourage you to join for an interesting discussion.
Follow the thread 🧵
doi.org/10.1101/2025...
#Microbiology #DataScience #PyTorch #QuantitativeBiology #REPOP
REPOP: bacterial population quantification from plate counts
Bacterial counts from native environments, such as soil or the animal gut, often show substantial variability across replicate samples. This heterogeneity is typically attributed to genetic or environ...
www.biorxiv.org
April 7, 2025 at 6:14 PM
Hello all, 📣📣📣
If you do #PlateCounting , I want you to take a look at this new preprint.🧫🧫🧫
If you don't, I still encourage you to join for an interesting discussion.
Follow the thread 🧵
doi.org/10.1101/2025...
#Microbiology #DataScience #PyTorch #QuantitativeBiology #REPOP
If you do #PlateCounting , I want you to take a look at this new preprint.🧫🧫🧫
If you don't, I still encourage you to join for an interesting discussion.
Follow the thread 🧵
doi.org/10.1101/2025...
#Microbiology #DataScience #PyTorch #QuantitativeBiology #REPOP
Making pathogen lethality quantitative using fractal morphology and biochemical constraints.
#SystemsBiology #ComplexSystems #QuantitativeBiology #PathogenEvolution #StructuralBiology #FractalAnalysis #CryoEM #ComplexityScience #Biophysics #TheoreticalBiology
doi.org/10.1016/j.bi...
#SystemsBiology #ComplexSystems #QuantitativeBiology #PathogenEvolution #StructuralBiology #FractalAnalysis #CryoEM #ComplexityScience #Biophysics #TheoreticalBiology
doi.org/10.1016/j.bi...
February 8, 2026 at 1:59 AM
Making pathogen lethality quantitative using fractal morphology and biochemical constraints.
#SystemsBiology #ComplexSystems #QuantitativeBiology #PathogenEvolution #StructuralBiology #FractalAnalysis #CryoEM #ComplexityScience #Biophysics #TheoreticalBiology
doi.org/10.1016/j.bi...
#SystemsBiology #ComplexSystems #QuantitativeBiology #PathogenEvolution #StructuralBiology #FractalAnalysis #CryoEM #ComplexityScience #Biophysics #TheoreticalBiology
doi.org/10.1016/j.bi...
Want to add novel developmental biology and biophysics methods to your research? Have a look at #EMBLDevBio, where you'll learn all about highly multiplexed RNA fluorescent in situ hybridisation, quantitative imaging, and more 🥼
📥 Apply by 26 Mar
🔗 s.embl.org/ptd25-01-bl
#quantitativebiology
📥 Apply by 26 Mar
🔗 s.embl.org/ptd25-01-bl
#quantitativebiology
February 19, 2025 at 2:53 PM
Want to add novel developmental biology and biophysics methods to your research? Have a look at #EMBLDevBio, where you'll learn all about highly multiplexed RNA fluorescent in situ hybridisation, quantitative imaging, and more 🥼
📥 Apply by 26 Mar
🔗 s.embl.org/ptd25-01-bl
#quantitativebiology
📥 Apply by 26 Mar
🔗 s.embl.org/ptd25-01-bl
#quantitativebiology
A warm welcome to Stanley Strawbridge @stanleystrawbridge.bsky.social, who joins us as a #PhysicsOfLife & #QuantitativeBiology Fellow from @scicambridge.bsky.social. His work explores early human embryo form and function.
#AdvancedImaging #AppliedMathematics #Bioengineering #stemcells #development
#AdvancedImaging #AppliedMathematics #Bioengineering #stemcells #development
March 10, 2025 at 10:21 AM
A warm welcome to Stanley Strawbridge @stanleystrawbridge.bsky.social, who joins us as a #PhysicsOfLife & #QuantitativeBiology Fellow from @scicambridge.bsky.social. His work explores early human embryo form and function.
#AdvancedImaging #AppliedMathematics #Bioengineering #stemcells #development
#AdvancedImaging #AppliedMathematics #Bioengineering #stemcells #development
💡 We built a quantitative human-based cell-free translation platform that tests thousands of reactions in parallel, directly measuring protein synthesis while bypassing cellular toxicity.
#quantitativebiology #RNA #ribosome #cellfree #drugdiscovery
#quantitativebiology #RNA #ribosome #cellfree #drugdiscovery
October 13, 2025 at 10:35 AM
💡 We built a quantitative human-based cell-free translation platform that tests thousands of reactions in parallel, directly measuring protein synthesis while bypassing cellular toxicity.
#quantitativebiology #RNA #ribosome #cellfree #drugdiscovery
#quantitativebiology #RNA #ribosome #cellfree #drugdiscovery
#Bowel #InflammatoryBowelDisease #ComputationalBiology #QuantitativeBiology #Bioinformatics #BiomedicalInformatics
September 19, 2025 at 7:01 PM
#INSPIRE2026 is now open for registration. Spend 2-weeks getting hands on experience in #QuantitativeBiology and #ResearchTranslation @utm.utoronto.ca
www.utm.utoronto.ca/dean/inspire
www.utm.utoronto.ca/dean/inspire
INSPIRE | Office of the Vice-Principal Academic and Dean
U of T's Interdisciplinary Science Program in Research & Entrepreneurship Discover the Quantitative BiosciencesJune 15–26, 2026Join a two‑week immersive research experience where you’ll explore unanswered biological questions inside state‑of‑the‑art laboratories.
www.utm.utoronto.ca
February 27, 2026 at 2:49 PM
#INSPIRE2026 is now open for registration. Spend 2-weeks getting hands on experience in #QuantitativeBiology and #ResearchTranslation @utm.utoronto.ca
www.utm.utoronto.ca/dean/inspire
www.utm.utoronto.ca/dean/inspire
🚀 Qlife Winter School 2026: Quantitative Approaches to DNA Damage and Repair! Hands-on workshops for Master's, PhD, postdocs & junior scientists. 🗓 Apply by Jan 19, 2026! #QlifeWinterSchool #QuantitativeBiology #LifeScienceTraining
January 6, 2026 at 10:34 AM
🚀 Qlife Winter School 2026: Quantitative Approaches to DNA Damage and Repair! Hands-on workshops for Master's, PhD, postdocs & junior scientists. 🗓 Apply by Jan 19, 2026! #QlifeWinterSchool #QuantitativeBiology #LifeScienceTraining
🚨 PhD Projects 🚨
We are advertising two UKRI funded PhD projects at the @sheffielduni.bsky.social. #stemcells #development #embryology #reproductivephysiology #mathmaticalmodelling #quantitativebiology
We are advertising two UKRI funded PhD projects at the @sheffielduni.bsky.social. #stemcells #development #embryology #reproductivephysiology #mathmaticalmodelling #quantitativebiology
October 31, 2025 at 7:39 AM
🚨 PhD Projects 🚨
We are advertising two UKRI funded PhD projects at the @sheffielduni.bsky.social. #stemcells #development #embryology #reproductivephysiology #mathmaticalmodelling #quantitativebiology
We are advertising two UKRI funded PhD projects at the @sheffielduni.bsky.social. #stemcells #development #embryology #reproductivephysiology #mathmaticalmodelling #quantitativebiology
2/2
In this podcast episode, I talk with Dr Jan Roden and Dr Kate McDole to unpack their ideal registration pipelines.
🎧 Listen now: www.youtube.com/watch?v=tAjl...
#LightsheetMicroscopy #3DRegistration #ImageAnalysis #ComputationalMicroscopy #Bioimaging #DeepImaging #QuantitativeBiology
In this podcast episode, I talk with Dr Jan Roden and Dr Kate McDole to unpack their ideal registration pipelines.
🎧 Listen now: www.youtube.com/watch?v=tAjl...
#LightsheetMicroscopy #3DRegistration #ImageAnalysis #ComputationalMicroscopy #Bioimaging #DeepImaging #QuantitativeBiology
Image Analysis in Light-Sheet Microscopy: Big Data Processing, Handling, and Storage
In Episode 4 of The Light-Sheet Chronicles Podcast podcast, host Dr. Elisabeth Kugler explores how researchers tackle the vast data challenges of light-sheet fluorescence microscopy. Joined by Dr.…
www.youtube.com
April 8, 2026 at 11:01 AM
2/2
In this podcast episode, I talk with Dr Jan Roden and Dr Kate McDole to unpack their ideal registration pipelines.
🎧 Listen now: www.youtube.com/watch?v=tAjl...
#LightsheetMicroscopy #3DRegistration #ImageAnalysis #ComputationalMicroscopy #Bioimaging #DeepImaging #QuantitativeBiology
In this podcast episode, I talk with Dr Jan Roden and Dr Kate McDole to unpack their ideal registration pipelines.
🎧 Listen now: www.youtube.com/watch?v=tAjl...
#LightsheetMicroscopy #3DRegistration #ImageAnalysis #ComputationalMicroscopy #Bioimaging #DeepImaging #QuantitativeBiology
I am excited to share that the Allen Institute for Cell Science is looking for a Director of Quantitative Cellular Imaging! Learn more and apply now: alleninstitute.org/careers/jobs...
#CellBiology #QuantitativeBiology #ScienceJobs
#CellBiology #QuantitativeBiology #ScienceJobs
Jobs
We are working to solve the biggest mysteries in bioscience.
alleninstitute.org
March 5, 2025 at 11:42 PM
I am excited to share that the Allen Institute for Cell Science is looking for a Director of Quantitative Cellular Imaging! Learn more and apply now: alleninstitute.org/careers/jobs...
#CellBiology #QuantitativeBiology #ScienceJobs
#CellBiology #QuantitativeBiology #ScienceJobs
6/6
If you plate, you need REPOP.
Software -- github.com/PessoaP/REPOP
Preprint -- elifesciences.org/reviewed-pre...
Special thanks to the Lab Members @pedropessoaphd.bsky.social, Carol Lu and Stanimir Tashev
As well as Rory Kruithoff and @dpshepherd.bsky.social
#Biophysics #QuantitativeBiology
If you plate, you need REPOP.
Software -- github.com/PessoaP/REPOP
Preprint -- elifesciences.org/reviewed-pre...
Special thanks to the Lab Members @pedropessoaphd.bsky.social, Carol Lu and Stanimir Tashev
As well as Rory Kruithoff and @dpshepherd.bsky.social
#Biophysics #QuantitativeBiology
GitHub - PessoaP/REPOP
Contribute to PessoaP/REPOP development by creating an account on GitHub.
github.com
August 6, 2025 at 10:30 PM
6/6
If you plate, you need REPOP.
Software -- github.com/PessoaP/REPOP
Preprint -- elifesciences.org/reviewed-pre...
Special thanks to the Lab Members @pedropessoaphd.bsky.social, Carol Lu and Stanimir Tashev
As well as Rory Kruithoff and @dpshepherd.bsky.social
#Biophysics #QuantitativeBiology
If you plate, you need REPOP.
Software -- github.com/PessoaP/REPOP
Preprint -- elifesciences.org/reviewed-pre...
Special thanks to the Lab Members @pedropessoaphd.bsky.social, Carol Lu and Stanimir Tashev
As well as Rory Kruithoff and @dpshepherd.bsky.social
#Biophysics #QuantitativeBiology
Hello all,
If you do #PlateCounting, you may want to take a look at our new eLife @elife.bsky.social
If you don't, I still encourage you to join for an interesting discussion.
Follow the thread 🧵
elifesciences.org/reviewed-pre...
#Microbiology #DataScience #PyTorch #QuantitativeBiology #REPOP
If you do #PlateCounting, you may want to take a look at our new eLife @elife.bsky.social
If you don't, I still encourage you to join for an interesting discussion.
Follow the thread 🧵
elifesciences.org/reviewed-pre...
#Microbiology #DataScience #PyTorch #QuantitativeBiology #REPOP
REPOP: bacterial population quantification from plate counts
elifesciences.org
August 6, 2025 at 10:30 PM
Hello all,
If you do #PlateCounting, you may want to take a look at our new eLife @elife.bsky.social
If you don't, I still encourage you to join for an interesting discussion.
Follow the thread 🧵
elifesciences.org/reviewed-pre...
#Microbiology #DataScience #PyTorch #QuantitativeBiology #REPOP
If you do #PlateCounting, you may want to take a look at our new eLife @elife.bsky.social
If you don't, I still encourage you to join for an interesting discussion.
Follow the thread 🧵
elifesciences.org/reviewed-pre...
#Microbiology #DataScience #PyTorch #QuantitativeBiology #REPOP
🔬 Boost your experiments with our automated solution! 📨 Drop us a DM here or at bit.ly/4kHlJK5
#Nanotechnology #SingleCellManipulation #SCFS #SingleCell #CellAdhesion #SingleCellForceSpectroscopy #CellMechanics #NonInvasiveMeasurements #CellularForces #QuantitativeBiology
#Nanotechnology #SingleCellManipulation #SCFS #SingleCell #CellAdhesion #SingleCellForceSpectroscopy #CellMechanics #NonInvasiveMeasurements #CellularForces #QuantitativeBiology
July 17, 2025 at 6:45 AM
🔬 Boost your experiments with our automated solution! 📨 Drop us a DM here or at bit.ly/4kHlJK5
#Nanotechnology #SingleCellManipulation #SCFS #SingleCell #CellAdhesion #SingleCellForceSpectroscopy #CellMechanics #NonInvasiveMeasurements #CellularForces #QuantitativeBiology
#Nanotechnology #SingleCellManipulation #SCFS #SingleCell #CellAdhesion #SingleCellForceSpectroscopy #CellMechanics #NonInvasiveMeasurements #CellularForces #QuantitativeBiology