#comparativegenomics
☕Earl Grey v7.0.0 brewed fresh☕

Nested TEs finally get the treatment they deserve: iterative detection of deep nesting, cleaner GFF annotations, and coverage stats that don’t double-count genomic space + a RepeatCraft edge-case fix.

Happy new year to the TE folks! 🧬

github.com/TobyBaril/Ea...
GitHub - TobyBaril/EarlGrey: Earl Grey: A fully automated TE curation and annotation pipeline
Earl Grey: A fully automated TE curation and annotation pipeline - TobyBaril/EarlGrey
github.com
January 5, 2026 at 3:12 PM
#ERGAReads | Distinct genomic architectures but the same gene underlie the convergent evolution of a plant supergene 🌸🧬
www.science.org/doi/10.1126/...
#genomes #plantgenomics #evolution #supergenes #comparativegenomics

@gpotente.bsky.social
Distinct genomic architectures but the same gene underlie the convergent evolution of a plant supergene
High-quality genome assemblies from multiple plant species reveal different paths of evolution in supergenes.
www.science.org
September 30, 2026 at 7:30 AM
Join our online course on Sex Chromosome Evolution (6–10 Oct) with @astridboehne.bsky.social & @idarolti.bsky.social to gain hands-on experience in genomic and transcriptomic analyses.
www.physalia-courses.org/courses-work...

#SexChromosomes #GenomeEvolution #Transcriptomics #ComparativeGenomics
Sex chromosome evolution
Dates 6-10 October 2025 To foster international participation, this course will be held online
www.physalia-courses.org
September 17, 2025 at 3:37 PM
Only 1 seat left!

#ComparativeGenomics
Last seats available! 🚨
Join our #ComparativeGenomics course with @sedlazeck.bsky.social & @Ingo Ebersberger and learn how to analyse, compare, and interpret genomes using modern bioinformatics approaches. Don’t miss it—registration is closing soon!

@nanoporetech.com @pacbio.bsky.social
Join our online #ComparativeGenomics course with Ingo & @sedlazeck.bsky.social , 23-27 Feb 2026! Learn genome assembly, variant detection (SNVs & SVs), and functional impact analysis with hands-on sessions.

www.physalia-courses.org/courses-work...

#Bioinformatics #Genomics
February 19, 2026 at 7:48 AM
Today we kicked off the #ComparativeGenomics course with @sedlazeck.bsky.social & Ingo Ebersberger!

On Day 1, we’re covering de novo assembly strategies, best practices, and quality control for genome assemblies.
February 23, 2026 at 5:26 PM
🚨Last chance! Submit an abstract to #Fungal26 by tomorrow, December 4: buff.ly/1AMwJhf

They can cover an array of topics including #ComparativeGenomics #FunctionalGenomics #Pathogenic #GeneRegulation #CellBiology #Biochemistry #Metabolism #FungalEcology #Evo #DevelopmentalBio #PopGen and more.
December 3, 2025 at 2:02 PM
Microbial Genomics and Metagenomics (MGM) Workshop

Learn all about IMG/M and other @jgi.doe.gov data systems for #microbiology #metagenomics #microbiome #bioinformatics #comparativegenomics at our 5-day workshop

April 28-May 2, 2025 in Berkeley

Registration is now open: mgm.jgi.doe.gov
December 17, 2024 at 7:28 PM
Thanks to our #ComparativeGenomics team!

Special thanks to our instructors @sedlazeck.bsky.social & Ingo Ebersberger and this great group of attendees!

We wish you all the best with your projects and data!
February 27, 2026 at 5:56 PM
Really enjoyed the inspiring talk given by @elinork.bsky.social for the first inaugural Janet Thornton lecture! Demonstrates the exciting future ahead for #comparativegenomics led by the #zoonomia consortium @earlhaminst.bsky.social
November 25, 2024 at 3:54 PM
(1/3) 🌍 EBP’s Zoonomia Project (zoonomiaproject.org) is transforming how we understand both biodiversity and human health!
#Zoonomia #Science Article 2023:
www.science.org/doi/10.1126/...
www.sciencenews.org/article/find...

#ComparativeGenomics #ZoonomiaProject #Evolution #Conservation
June 12, 2025 at 5:58 PM
#DBfeature 🐣

Stage‑matched scRNA‑seq uncovers a “trailblazer” gene network shared between mouse and chick, driving neural crest migration into craniofacial arches.

by J.A. Morrison et al.
www.sciencedirect.com/science/arti...

#EvoDevo #ComparativeGenomics #SingleCell
August 18, 2025 at 6:22 PM
📣 Final opportunity to join #CGUE2026

👉Registration extended to Aug 31
👉Poster submissions reopened until Aug 15

🔗 comparativegenomics2026.com

#Genomics #ComparativeGenomics #Protists #Protistology #Eukaryotes #ProtistsOnSky #Microbiology
August 3, 2026 at 9:21 AM
Do you know the #ERGA BioGenome #Analysis and #Applications seminar series?
📽️ youtube.com/playlist?lis...
Topics include #Phylogenomics, #FunctionalGenomics, #PopulationGenomics, and #ComparativeGenomics. Subscribe to our channel and stay informed! 🧬

#genomics #science @ebpgenome.bsky.social
ERGA BioGenome Analysis & Applications Seminars
https://www.erga-biodiversity.eu/post/erga-biogenome-analysis-and-applications-seminars
youtube.com
March 20, 2026 at 8:30 AM
Proud to announce that PANORAMA just came out in @plos.org Computational Biology🧬

Paper: journals.plos.org/ploscompbiol...
Code: github.com/labgem/PANOR...
Docs: panorama.readthedocs.io/latest/

#Bioinformatics #Pangenomics #ComparativeGenomics #Microbiology #OpenScience

🧵 Here's what it does 👇
July 20, 2026 at 12:04 PM
Excited to announce the discovery of a withanolide biosynthetic gene cluster! A huge achievement from our collaboration with the Franke Lab. Explore the findings here:

doi.org/10.1101/2024...

#ComparativeGenomics #Biochemistry
@puckerlab.bsky.social @tubraunschweig.bsky.social
October 2, 2024 at 9:26 PM
Our @nisbetalice.bsky.social, @emmabeansworth.bsky.social & @gemma-langridge.bsky.social are having a magnifique time at #I3S. Currently they are enjoying talks in the #comparativegenomics session where Emma will also present her poster (102) showing genome rearrangement can impact #virulence & #AMR
June 24, 2025 at 12:45 PM
⏰ The countdown is on!

Only 7 days remain to register for CGUE2026.

Five days of cutting-edge science, inspiring discussions and networking with the international community studying the evolution and diversity of unicellular eukaryotes.

#ComparativeGenomics #Protistology #Protists #Microbiology
July 8, 2026 at 7:45 AM
This year's new intake of @mmbdtp.bsky.social students are enjoying getting stuck into @gemma-langridge.bsky.social's #comparativegenomics for week 4 of their bioinformatics training, with a couple of the #OG students @nisbetalice.bsky.social & @eh-hayles.bsky.social assisting!🧵1/3
November 20, 2025 at 3:29 PM
Missed one of the latest #ERGA BioGenome #Analysis and #Applications seminars? Catch up on all sessions on the ERGA YouTube Channel!
📽️ youtube.com/playlist?lis...

Topics include #Phylogenomics, #FunctionalGenomics, #PopulationGenomics, and #ComparativeGenomics.
ERGA BioGenome Analysis & Applications Seminars - YouTube
https://www.erga-biodiversity.eu/post/erga-biogenome-analysis-and-applications-seminars
youtube.com
May 30, 2025 at 2:10 PM
Why are #tRNA genes organized the way they are in 🌱 plant genomes?

In our new @qbiope-bot.bsky.social preprint 🚨📄, we show that their position, copy number, and regulatory sequences are not random! #PlantGenomics #ComparativeGenomics #Evolution

arxiv.org/abs/2511.01943

🧶 A thread 👇
Multilevel genomic constraints shape nuclear tRNA gene organization in plants
Transfer RNAs (tRNAs) are essential components of the translational machinery. Their abundance and diversity shape decoding capacity and protein synthesis efficiency and accuracy. Because tRNA abundan...
arxiv.org
May 5, 2026 at 11:03 AM
🎉Good news! Registration for #CGUE26 has been extended until 31 August - no fee increase!

Join the international community exploring the diversity & evolution of unicellular eukaryotes.

👉Registration: comparativegenomics2026.com

#ProtistsOnSky #ComparativeGenomics #Protists #Genomics #Eukaryotes
July 20, 2026 at 9:07 AM
Last seats available! 🚨
Join our #ComparativeGenomics course with @sedlazeck.bsky.social & @Ingo Ebersberger and learn how to analyse, compare, and interpret genomes using modern bioinformatics approaches. Don’t miss it—registration is closing soon!

@nanoporetech.com @pacbio.bsky.social
Join our online #ComparativeGenomics course with Ingo & @sedlazeck.bsky.social , 23-27 Feb 2026! Learn genome assembly, variant detection (SNVs & SVs), and functional impact analysis with hands-on sessions.

www.physalia-courses.org/courses-work...

#Bioinformatics #Genomics
February 11, 2026 at 12:16 PM
Interested in Comparative QTLomics, crop research, and AI? I am recruiting a postdoctoral researcher to join me at the Center for Quantitative Genetics and Genomics - Aarhus University (Denmark).
international.au.dk/about/profil...

#QTL #ComparativeGenomics #Phylogenomics #Plants #Evolution #AI
July 3, 2026 at 7:17 AM
(2/3) 🌍 By sequencing the genomes of over 240 mammalian species, scientists can identify conserved genes — the ancient, unchanging parts of DNA that reveal what’s truly essential for life. 🧬

#ZoonomiaProject #ComparativeGenomics #Evolution #GenomeScience #Biodiversity #HumanHealth #Conservation
June 12, 2025 at 6:07 PM